Zonotrichia leucophrys gambelii (white-crowned sparrow): 135457849
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Entry
135457849 CDS
T09958
Name
(RefSeq) interstitial collagenase-like
KO
K01388
matrix metalloproteinase-1 (interstitial collagenase) [EC:
3.4.24.7
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
135457849
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zle01002
]
135457849
Enzymes [BR:
zle01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.7 interstitial collagenase
135457849
Peptidases and inhibitors [BR:
zle01002
]
Metallo peptidases
Family M10
135457849
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
Reprolysin_3
Reprolysin_5
PG_binding_1
Reprolysin_4
Peptidase_M54
Peptidase_M66
DUF4953
Metallopep
Peptidase_M91
Reprolysin_2
Motif
Other DBs
NCBI-GeneID:
135457849
NCBI-ProteinID:
XP_064588737
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All DBs
Position
1:76268870..76274304
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AA seq
400 aa
AA seq
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MQLFFGLEVTGRPDLDTLEVMKKPRCGVPDVQRYAFTPGNPKWKRNNLTYRILNYTPKMR
RADVDEAIRKALNVWSNVTPLTFQRVEDKVADIMISFAYRDHRDNSPFDGPNGQLAHAFQ
PGEGLGGDVHMDEEEAWTKDGRGYNLFIVLAHELGHSLGLSHSNDPGALMYPTYSYTDPS
EFRLPQDDIDGIQAIYGRSNAAVQPTGPVTPEACDPNLTFDAITTLRGEIFFFKGRYMLR
KHPERTETELNFISLFWPRLPSGIQAAYENVETDEITIFKEDKYWVIRGYDVLPGYPKPI
YRFGLPKTVKRVNAAYNDEATGKTYFFVADRYWRYDENKKSMDHGYPRKIVSDFGNIGRV
DAAFQKDGYVYFFHGTTQFQFDPRAKRIVRKMKSTTWFNC
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgttctttggactagaagtgactggaagacctgatcttgacacattggaggtg
atgaaaaaacccagatgtggtgtacctgatgtgcagcgatatgcattcacaccagggaat
cccaaatggaaaagaaataatctgacatacaggattttgaattacaccccaaagatgaga
cgagctgatgtcgatgaagccatcagaaaagctctcaatgtctggagcaacgtgacacca
ttgacattccaaagggttgaggacaaagtagcagatataatgatctcttttgcttataga
gaccaccgtgacaattctccttttgatggtcccaatggacagctggctcatgcattccag
cctggtgaaggtcttggtggagatgtgcatatggatgaggaagaagcttggacgaaagat
ggaagaggctacaatttgttcattgttcttgcccatgagcttggccattcactgggtctg
tctcattcaaatgatcctggagcactgatgtatccaacttattcctacactgaccccagt
gaattccgtcttcctcaggatgacattgatggaattcaggccatctatgggcggtctaat
gctgctgtgcagccaacaggacctgtgactccagaagcttgtgacccaaatttgacattt
gatgctattactactctacgtggagaaatattcttcttcaagggcagatacatgctgcgc
aaacatcccgaaaggacagagacagagctcaattttatctcactgttctggccaaggtta
ccatcaggaattcaagctgcttatgaaaacgttgaaacagatgaaattacaatttttaaa
gaggataaatattgggtcatcaggggatatgatgttctacctggctatcccaaaccaatc
tatcgctttgggctcccaaagactgtcaaaagggttaatgcagcttacaacgatgaagcc
acagggaaaacatacttctttgtagctgacagatactggagatacgatgaaaataaaaaa
tccatggatcatgggtatcccaggaaaatagtctctgactttggaaacattggcagggtt
gatgctgctttccagaaagatggctatgtgtatttcttccatggaacaacccagttccag
tttgatcctcgtgccaaacggattgttcgaaaaatgaagagcaccacctggtttaattgt
taa
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