Pathway modules
|
|
Carbohydrate metabolism
|
Central carbohydrate metabolism
|
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:map00010 map01200 map01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH:map00010 map01200 map01230 map01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH:map00010 map00020 map01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:map00010 map00020 map00620 map00785 map01200 map01210 map01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH:map00020 map01200 map01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:map00020 map01200 map01210 map01230 map01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:map00020 map01200 map01210 map01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH:map00030 map01200 map01100 map01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:map00030 map01200 map01100 map01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:map00030 map01200 map01230 map01100 map01120]
M00580 Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH:map00030 map01200 map01230 map01100 map01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH:map00030 map00230 map01200 map01230 map01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:map00030 map01200 map01100 map01120]
M00308 Semi-phosphorylative Entner-Doudoroff pathway, gluconate => glycerate-3P [PATH:map00030 map01200 map01100 map01120]
M00633 Semi-phosphorylative Entner-Doudoroff pathway, gluconate/galactonate => glycerate-3P [PATH:map00030 map00052 map01200 map01100]
M00309 Non-phosphorylative Entner-Doudoroff pathway, gluconate/galactonate => glycerate [PATH:map00030 map00052 map01200 map01100 map01120]
|
Other carbohydrate metabolism
|
M00014 Glucuronate pathway (uronate pathway) [PATH:map00040 map01100]
M00630 D-Galacturonate degradation (fungi), D-galacturonate => glycerol [PATH:map00040 map01100]
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:map00040 map00030 map01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:map00040 map00030 map01100]
M00081 Pectin degradation [PATH:map00040 map01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:map00052 map01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:map00052 map01100]
M00129 Ascorbate biosynthesis, animals, glucose-1P => ascorbate [PATH:map00040 map00053 map01240 map01100]
M00114 Ascorbate biosynthesis, plants, fructose-6P => ascorbate [PATH:map00051 map00053 map01240 map01100 map01110]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:map00053 map01100 map01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:map00500 map01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:map00500 map01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:map00500 map01100 map01110]
M00012 Glyoxylate cycle [PATH:map00630 map01200 map01100 map01110]
M00373 Ethylmalonyl pathway [PATH:map00630 map01200 map01100 map01120]
M00740 Methylaspartate cycle [PATH:map00020 map00250 map00630 map01200 map01100 map01120]
M00532 Photorespiration [PATH:map00630 map01200 map01100 map01110]
M00013 Malonate semialdehyde pathway, propanoyl-CoA => acetyl-CoA [PATH:map00410 map00640 map01200 map01100]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:map00280 map00630 map00640 map01200 map01100]
M00982 Methylcitrate cycle [PATH:map00640 map00020 map01200 map01100 map01120]
M00968 Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate [PATH:map00030 map00230 map00240 map00630 map01100]
M00130 Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4 [PATH:map00562 map01100]
M00131 Inositol phosphate metabolism, Ins(1,3,4,5)P4 => Ins(1,3,4)P3 => myo-inositol [PATH:map00562 map01100]
M00132 Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH:map00562 map01100]
|
|
Energy metabolism
|
Carbon fixation
|
M00165 Reductive pentose phosphate cycle (Calvin cycle) [PATH:map00710 map01200 map01100 map01120]
M00168 CAM (Crassulacean acid metabolism), dark [PATH:map00620 map00710 map01200 map01100 map01120]
M00169 CAM (Crassulacean acid metabolism), light [PATH:map00620 map00710 map01200 map01100 map01120]
M00172 C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:map00620 map00710 map01200 map01100 map01120]
M00171 C4-dicarboxylic acid cycle, NAD - malic enzyme type [PATH:map00710 map01200 map01100 map01120]
M00170 C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type [PATH:map00710 map01200 map01100 map01120]
M00173 Reductive citrate cycle (Arnon-Buchanan cycle) [PATH:map00720 map01200 map01100 map01120]
M00376 3-Hydroxypropionate bi-cycle [PATH:map00720 map01200 map01100 map01120]
M00375 Hydroxypropionate-hydroxybutylate cycle [PATH:map00720 map01200 map01100 map01120]
M00374 Dicarboxylate-hydroxybutyrate cycle [PATH:map00720 map01200 map01100 map01120]
M00377 Reductive acetyl-CoA pathway (Wood-Ljungdahl pathway) [PATH:map00720 map01200 map01100 map01120]
M00579 Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:map00430 map00620 map00720 map01200 map01100 map01120]
M00620 Incomplete reductive citrate cycle, acetyl-CoA => oxoglutarate [PATH:map00720 map01200 map01100 map01120]
|
Methane metabolism
|
M00567 Methanogenesis, CO2 => methane [PATH:map00680 map01200 map01100 map01120]
M00357 Methanogenesis, acetate => methane [PATH:map00680 map01200 map01100 map01120]
M00356 Methanogenesis, methanol => methane [PATH:map00680 map01200 map01100 map01120]
M00563 Methanogenesis, methylamine/dimethylamine/trimethylamine => methane [PATH:map00680 map01200 map01100 map01120]
M00358 Coenzyme M biosynthesis [PATH:map00680 map01240 map01100 map01120]
M00608 2-Oxocarboxylic acid chain extension, 2-oxoglutarate => 2-oxoadipate => 2-oxopimelate => 2-oxosuberate [PATH:map00300 map00680 map01210 map01230 map01240 map01100 map01120]
M00174 Methane oxidation, methanotroph, methane => formaldehyde [PATH:map00680 map01200 map01220 map01100 map01120]
M00346 Formaldehyde assimilation, serine pathway [PATH:map00680 map01200 map01100 map01120]
M00345 Formaldehyde assimilation, ribulose monophosphate pathway [PATH:map00030 map00680 map01200 map01230 map01100 map01120]
M00344 Formaldehyde assimilation, xylulose monophosphate pathway [PATH:map00680 map01200 map01100 map01120]
M00378 F420 biosynthesis, archaea [PATH:map00680 map01240 map01100 map01120]
M00935 Methanofuran biosynthesis [PATH:map00680 map01240 map01100]
M00422 Acetyl-CoA pathway, CO2 => acetyl-CoA [PATH:map00680 map01200 map01100 map01120]
|
Nitrogen metabolism
|
M00175 Nitrogen fixation, nitrogen => ammonia [PATH:map00910 map01310 map01100 map01120]
M00531 Assimilatory nitrate reduction, nitrate => ammonia [PATH:map00910 map01310 map01100 map01120]
M00530 Dissimilatory nitrate reduction, nitrate => ammonia [PATH:map00910 map01310 map01100 map01120]
M00529 Denitrification, nitrate => nitrogen [PATH:map00910 map01310 map01100 map01120]
M00528 Nitrification, ammonia => nitrite [PATH:map00910 map01310 map01100 map01120]
M00804 Complete nitrification, comammox, ammonia => nitrite => nitrate [PATH:map00910 map01310 map01100 map01120]
M00973 Anammox, nitrite + ammonia => nitrogen [PATH:map00910 map01310 map01100 map01120]
|
Sulfur metabolism
|
M00987 Assimilatory sulfate reduction, plants, sulfate => H2S [PATH:map00920 map01320 map01100]
M00176 Assimilatory sulfate reduction, sulfate => H2S [PATH:map00920 map01320 map01100 map01120]
M00596 Dissimilatory sulfate reduction, sulfate => H2S [PATH:map00920 map01320 map01100 map01120]
M00595 Sulfur oxidation, SOX system, thiosulfate => sulfate [PATH:map00920 map01320 map01100 map01120]
M00984 Sulfur oxidation, tetrathionate intermediate (S4I) pathway, thiosulfate => sulfur + sulfate + thiosulfate [PATH:map00920 map01320 map01100 map01120]
M00986 Sulfur reduction, sulfur => sulfide [PATH:map00920 map01320 map01100 map01120]
M00985 Sulfide oxidation, sulfide => sulfur [PATH:map00920 map01320 map01100 map01120]
M00990 Dimethylsulfoniopropionate (DMSP) degradation, demethylation pathway, DMSP => methanethiol [PATH:map00920 map01100 map01120]
M00991 Dimethylsulfoniopropionate (DMSP) degradation, cleavage pathway, DMSP => acetyl-CoA [PATH:map00920 map00640 map01320 map01100 map01120]
M00992 Dimethylsulfoniopropionate (DMSP) degradation, cleavage pathway, DMSP => acrylate => acetyl-CoA [PATH:map00920 map00640 map01320 map01100 map01120]
M00993 Dimethylsulfoniopropionate (DMSP) degradation, cleavage pathway, DMSP => propionyl-CoA [PATH:map00920 map00640 map01320 map01100 map01120]
|
Photosynthesis
|
ATP synthesis
|
|
Lipid metabolism
|
Fatty acid metabolism
|
M00082 Fatty acid biosynthesis, initiation [PATH:map00061 map01212 map01100]
M00083 Fatty acid biosynthesis, elongation [PATH:map00061 map01212 map01100]
M00873 Fatty acid biosynthesis in mitochondria, animals [PATH:map00061 map01212 map01100]
M00874 Fatty acid biosynthesis in mitochondria, fungi [PATH:map00061 map01212 map01100]
M00085 Fatty acid elongation in mitochondria [PATH:map00062 map01212 map01100]
M00415 Fatty acid elongation in endoplasmic reticulum [PATH:map00062 map01040 map01212 map01100]
M00086 beta-Oxidation, acyl-CoA synthesis [PATH:map00061 map00071 map01212 map01100]
M00087 beta-Oxidation [PATH:map00071 map01212 map01100]
M00861 beta-Oxidation, peroxisome, VLCFA [PATH:map01040 map01212 map01100]
M00885 Meromycolic acid biosynthesis, initiation and elongation FAS II (KasA) [PATH:map00074 map01100]
M00886 Meromycolic acid biosynthesis, initiation and elongation FAS II (KasA and KasB) [PATH:map00074 map01100]
M00887 Mycolic acid biosynthesis, meromycolic acid + alpha-carboxyacyl-CoA + trehalose => TMM => TDM/mAGP/GMM [PATH:map00074 map01100]
|
Sterol biosynthesis
|
Lipid metabolism
|
M00088 Ketone body biosynthesis, acetyl-CoA => acetoacetate/3-hydroxybutyrate/acetone [PATH:map00650 map01100]
M00089 Triacylglycerol biosynthesis [PATH:map00561 map01100]
M00098 Acylglycerol degradation [PATH:map00561 map01100]
M00090 Phosphatidylcholine (PC) biosynthesis, choline => PC [PATH:map00564 map01100]
M00091 Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:map00564 map01100]
M00092 Phosphatidylethanolamine (PE) biosynthesis, ethanolamine => PE [PATH:map00564 map01100]
M00093 Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:map00564 map01100]
M00094 Ceramide biosynthesis [PATH:map00600 map01100]
M00066 Lactosylceramide biosynthesis [PATH:map00600 map01100]
M00067 Sulfoglycolipids biosynthesis, ceramide/1-alkyl-2-acylglycerol => sulfatide/seminolipid [PATH:map00600 map00565 map01100]
M00099 Sphingosine biosynthesis [PATH:map00600 map01100]
M00100 Sphingosine degradation [PATH:map00600 map01100]
M00113 Jasmonic acid biosynthesis [PATH:map00592 map01100 map01110]
|
|
Nucleotide metabolism
|
Purine metabolism
|
M00048 De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:map00230 map01100]
M00049 Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:map00230 map01232 map01240 map01100]
M00050 Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:map00230 map01232 map01100]
M00053 Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:map00230 map00240 map01232 map01100]
M00958 Adenine ribonucleotide degradation, AMP => Urate [PATH:map00230 map01232 map01100]
M00959 Guanine ribonucleotide degradation, GMP => Urate [PATH:map00230 map01232 map01100]
M00546 Purine degradation, xanthine => urea [PATH:map00230 map01100]
|
Pyrimidine metabolism
|
M00051 De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:map00240 map01240 map01100]
M00052 Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:map00240 map01232 map01240 map01100]
M00938 Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:map00240 map01232 map01100]
M00046 Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:map00240 map00410 map00770 map01100]
M00939 Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:map00240 map01100]
|
|
Amino acid metabolism
|
Serine and threonine metabolism
|
M00020 Serine biosynthesis, glycerate-3P => serine [PATH:map00260 map00680 map01200 map01230 map01100]
M00018 Threonine biosynthesis, aspartate => homoserine => threonine [PATH:map00260 map01230 map01100 map01110]
M00621 Glycine cleavage system [PATH:map00260 map00630 map00670 map00785 map01200 map01100]
M00555 Betaine biosynthesis, choline => betaine [PATH:map00260 map00670 map01100]
M00974 Betaine metabolism, animals, betaine => glycine [PATH:map00260 map00670 map01100]
M00975 Betaine degradation, bacteria, betaine => pyruvate [PATH:map00260 map01100]
M00033 Ectoine biosynthesis, aspartate => ectoine [PATH:map00260 map01210 map01230 map01100 map01120]
M00919 Ectoine degradation, ectoine => aspartate [PATH:map00260 map01100 map01120]
|
Cysteine and methionine metabolism
|
M00021 Cysteine biosynthesis, serine => cysteine [PATH:map00270 map00920 map01320 map01200 map01230 map01100 map01110]
M00338 Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:map00260 map00270 map00670 map01230 map01100]
M00609 Cysteine biosynthesis, methionine => cysteine [PATH:map00270 map01230 map01100]
M00017 Methionine biosynthesis, aspartate => homoserine => methionine [PATH:map00270 map01230 map01100]
M00034 Methionine salvage pathway [PATH:map00270 map01100]
M00035 Methionine degradation [PATH:map00270 map00670 map01100]
M00368 Ethylene biosynthesis, methionine => ethylene [PATH:map00270 map01100 map01110]
|
Branched-chain amino acid metabolism
|
M00019 Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:map00290 map00770 map01210 map01230 map01100 map01110]
M00535 Isoleucine biosynthesis, pyruvate => 2-oxobutanoate [PATH:map00290 map00660 map01210 map01230 map01100]
M00570 Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:map00290 map01230 map01100]
M00432 Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:map00290 map01210 map01230 map01100 map01110]
M00036 Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:map00280 map01100]
|
Lysine metabolism
|
M00016 Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:map00300 map01230 map01100]
M00525 Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine [PATH:map00300 map01230 map01100]
M00526 Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine [PATH:map00300 map01230 map01100]
M00527 Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:map00300 map01230 map01100 map01110]
M00030 Lysine biosynthesis, AAA pathway, 2-oxoglutarate => 2-aminoadipate => lysine [PATH:map00300 map01230 map01100]
M00433 Lysine biosynthesis, 2-oxoglutarate => 2-oxoadipate [PATH:map00300 map01210 map01230 map01100]
M00031 Lysine biosynthesis, mediated by LysW, 2-aminoadipate => lysine [PATH:map00300 map01210 map01230 map01100]
M00032 Lysine degradation, lysine => saccharopine => acetoacetyl-CoA [PATH:map00310 map01210 map01100]
M00956 Lysine degradation, bacteria, L-lysine => succinate [PATH:map00310 map01100 map01120]
M00957 Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA [PATH:map00310 map01100 map01120]
M00960 Lysine degradation, bacteria, L-lysine => D-lysine => succinate [PATH:map00310 map01100 map01120]
|
Arginine and proline metabolism
|
M00028 Ornithine biosynthesis, glutamate => ornithine [PATH:map00220 map01210 map01230 map01100]
M00763 Ornithine biosynthesis, mediated by LysW, glutamate => ornithine [PATH:map00220 map01210 map01230 map01100]
M00844 Arginine biosynthesis, ornithine => arginine [PATH:map00220 map01230 map01100]
M00845 Arginine biosynthesis, glutamate => acetylcitrulline => arginine [PATH:map00220 map01230 map01100]
M00029 Urea cycle [PATH:map00220 map01230 map01100]
M00978 Ornithine-ammonia cycle [PATH:map00220 map01100 map01110]
M00015 Proline biosynthesis, glutamate => proline [PATH:map00330 map01230 map01100]
M00970 Proline degradation, proline => glutamate [PATH:map00330 map01100]
M00972 Proline metabolism [PATH:map00330 map01100]
M00047 Creatine pathway [PATH:map00330 map00260 map01100]
M00879 Arginine succinyltransferase pathway, arginine => glutamate [PATH:map00330 map01100]
|
Polyamine biosynthesis
|
Histidine metabolism
|
M00026 Histidine biosynthesis, PRPP => histidine [PATH:map00340 map01230 map01100 map01110]
M00045 Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:map00340 map01100]
|
Aromatic amino acid metabolism
|
M00022 Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:map00400 map01230 map01100 map01110]
M00023 Tryptophan biosynthesis, chorismate => tryptophan [PATH:map00400 map01230 map01100 map01110]
M00024 Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:map00400 map01230 map01100 map01110]
M00910 Phenylalanine biosynthesis, chorismate => arogenate => phenylalanine [PATH:map00400 map01230 map01100 map01110]
M00025 Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:map00400 map01230 map01100]
M00040 Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:map00400 map01230 map01100 map01110]
M00042 Catecholamine biosynthesis, tyrosine => dopamine => noradrenaline => adrenaline [PATH:map00350 map01100]
M00043 Thyroid hormone biosynthesis, tyrosine => triiodothyronine/thyroxine [PATH:map00350 map01100]
M00044 Tyrosine degradation, tyrosine => homogentisate [PATH:map00350 map01100]
M00533 Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:map00350 map01220 map01100 map01120]
M00037 Melatonin biosynthesis, animals, tryptophan => serotonin => melatonin [PATH:map00380 map01100]
M00936 Melatonin biosynthesis, plants, tryptophan => serotonin => melatonin [PATH:map00380 map01100 map01110]
M00038 Tryptophan metabolism, tryptophan => kynurenine => 2-aminomuconate [PATH:map00380 map01100]
|
Other amino acid metabolism
|
M00027 GABA (gamma-Aminobutyrate) shunt [PATH:map00250 map00650 map01100]
M00369 Cyanogenic glycoside biosynthesis, tyrosine => dhurrin [PATH:map00460 map01100 map01110]
M00118 Glutathione biosynthesis, glutamate => glutathione [PATH:map00480 map01240 map01100]
M00947 D-Arginine racemization, D-arginine => L-arginine [PATH:map00470 map01100]
M00948 Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:map00470 map01100]
M00949 Staphylopine biosynthesis, L-histidine => staphylopine [PATH:map00470 map01100]
|
|
Glycan metabolism
|
Nucleotide sugar biosynthesis
|
Glycan biosynthesis
|
Glycosaminoglycan metabolism
|
M00057 Glycosaminoglycan biosynthesis, linkage tetrasaccharide [PATH:map00532 map00534 map01100]
M00058 Glycosaminoglycan biosynthesis, chondroitin sulfate backbone [PATH:map00532 map01100]
M00059 Glycosaminoglycan biosynthesis, heparan sulfate backbone [PATH:map00534 map01100]
M00076 Dermatan sulfate degradation [PATH:map00531 map01100]
M00077 Chondroitin sulfate degradation [PATH:map00531 map01100]
M00078 Heparan sulfate degradation [PATH:map00531 map01100]
M00079 Keratan sulfate degradation [PATH:map00531 map01100]
|
Lipopolysaccharide metabolism
|
M00060 KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:map00540 map01100]
M00866 KDO2-lipid A biosynthesis, Raetz pathway, non-LpxL-LpxM type [PATH:map00540 map01100]
M00867 KDO2-lipid A modification pathway [PATH:map00540 map01100]
|
Other polysaccharide metabolism
|
M00888 Galactofuranan biosynthesis, decaprenyl phosphate + UDP-GlcNAc (+ dTDP-Rha/UDP-Galf) => GL-5 [PATH:map00572 map01100]
|
|
Metabolism of cofactors and vitamins
|
Cofactor and vitamin metabolism
|
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:map00730 map01240 map01100]
M00895 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/glycine) => TMP/TPP [PATH:map00730 map01240 map01100]
M00896 Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP [PATH:map00730 map01240 map01100]
M00897 Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP [PATH:map00730 map01240 map01100]
M00898 Thiamine biosynthesis, pyridoxal-5P => TMP/thiamine/TPP [PATH:map00730 map01240 map01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:map00730 map01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:map00740 map01240 map01100 map01110]
M00911 Riboflavin biosynthesis, fungi, GTP => riboflavin/FMN/FAD [PATH:map00740 map01240 map01100]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:map00750 map01240 map01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:map00750 map01240 map01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:map00760 map01240 map01100]
M00912 NAD biosynthesis, tryptophan => quinolinate => NAD [PATH:map00380 map00760 map01240 map01100]
M00810 Nicotine degradation, pyridine pathway, nicotine => 2,6-dihydroxypyridine/succinate semialdehyde [PATH:map00760 map01100 map01120]
M00811 Nicotine degradation, pyrrolidine pathway, nicotine => succinate semialdehyde [PATH:map00760 map01100 map01120]
M00622 Nicotinate degradation, nicotinate => fumarate [PATH:map00760 map01100 map01120]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:map00770 map01240 map01100 map01110]
M00913 Pantothenate biosynthesis, 2-oxoisovalerate/spermine => pantothenate [PATH:map00770 map01240 map01100]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:map00770 map01240 map01100]
M00914 Coenzyme A biosynthesis, archaea, 2-oxoisovalerate => 4-phosphopantoate => CoA [PATH:map00770 map01240 map01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:map00780 map01240 map01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:map00780 map01240 map01100]
M00950 Biotin biosynthesis, BioU pathway, pimeloyl-ACP/CoA => biotin [PATH:map00780 map01240 map01100]
M00573 Biotin biosynthesis, BioI pathway, long-chain-acyl-ACP => pimeloyl-ACP => biotin [PATH:map00780 map01240 map01100]
M00577 Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin [PATH:map00780 map01240 map01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:map00785 map01240 map01100]
M00882 Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:map00785 map01240 map01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:map00785 map01240 map01100]
M00884 Lipoic acid biosynthesis, octanoyl-CoA => dihydrolipoyl-E2 [PATH:map00785 map01240 map01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:map00790 map00670 map01240 map01100]
M00840 Tetrahydrofolate biosynthesis, mediated by ribA and trpF, GTP => THF [PATH:map00790 map01240 map01100]
M00841 Tetrahydrofolate biosynthesis, mediated by PTPS, GTP => THF [PATH:map00790 map01240 map01100]
M00842 Tetrahydrobiopterin biosynthesis, GTP => BH4 [PATH:map00790 map01240 map01100]
M00843 L-threo-Tetrahydrobiopterin biosynthesis, GTP => L-threo-BH4 [PATH:map00790 map01240 map01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:map00790 map01240 map01100]
M00988 PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine [PATH:map00790 map01100]
M00140 C1-unit interconversion, prokaryotes [PATH:map00670 map01240 map01100]
M00141 C1-unit interconversion, eukaryotes [PATH:map00670 map01240 map01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:map00860 map01240 map01100 map01110]
M00868 Heme biosynthesis, animals and fungi, glycine => heme [PATH:map00860 map01240 map01100 map01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:map00860 map01240 map01100 map01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:map00860 map01240 map01100]
M00847 Heme biosynthesis, archaea, siroheme => heme [PATH:map00860 map01240 map01100 map01110]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:map00860 map01240 map01100]
M00925 Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:map00860 map01240 map01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:map00860 map01240 map01100]
M00836 Coenzyme F430 biosynthesis, sirohydrochlorin => coenzyme F430 [PATH:map00860 map01240 map01100 map01120]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:map00130 map01240 map01100 map01110]
M00989 Ubiquinone biosynthesis, O2-independent, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:map00130 map01240 map01100 map01110]
M00128 Ubiquinone biosynthesis, eukaryotes, 4-hydroxybenzoate + polyprenyl-PP => ubiquinone [PATH:map00130 map01240 map01100]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:map00130 map01240 map01100 map01110]
M00930 Menaquinone biosynthesis, futalosine pathway [PATH:map00130 map01240 map01100]
M00931 Menaquinone biosynthesis, modified futalosine pathway [PATH:map00130 map01240 map01100]
M00932 Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol [PATH:map00130 map01240 map01100 map01110]
M00112 Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol [PATH:map00130 map01240 map01100 map01110]
M00933 Plastoquinone biosynthesis, homogentisate + solanesyl-PP => plastoquinol [PATH:map00130 map01240 map01100 map01110]
|
|
Biosynthesis of terpenoids and polyketides
|
|
Biosynthesis of other secondary metabolites
|
|
Xenobiotics biodegradation
|
|
Signature modules
|