 Eukaryotic type
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 Prokaryotic type
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Bacterial type
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RNA polymerase
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Core subunits
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 K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K13797 rpoBC; DNA-directed RNA polymerase subunit beta-beta' [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
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Sigma factors
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K03086 rpoD; RNA polymerase primary sigma factor
K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K23514 fecI, prhI; RNA polymerase sigma-19 factor, ECF subfamily
K24073 cnrH; RNA polymerase sigma factor CnrH
K03089 rpoH; RNA polymerase sigma-32 factor
K03090 sigB; RNA polymerase sigma-B factor
K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
K27000 sigH; RNA polymerase sigma-H factor
K03093 sigI; RNA polymerase sigma-I factor
K26992 sigO; RNA polymerase sigma-O factor
K03092 rpoN; RNA polymerase sigma-54 factor
K02405 fliA, whiG; RNA polymerase sigma factor FliA
K24072 xpf; positive control factor
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Other transcription-related factors
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RNA polymerase-associated proteins
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K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
K02600 nusA; transcription termination/antitermination protein NusA
K03625 nusB; transcription antitermination protein NusB
K02601 nusG; transcription termination/antitermination protein NusG
K03599 sspA, mglA; stringent starvation protein A
K03600 sspB; stringent starvation protein B
K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
K17762 rsbS; rsbT antagonist protein RsbS
K17763 rsbR; rsbT co-antagonist protein RsbR
K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
K19707 rsbQ; sigma-B regulation protein RsbQ
K05518 rsbX; phosphoserine phosphatase RsbX [EC:3.1.3.3]
K04749 rsbV; anti-sigma B factor antagonist
K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
K03597 rseA; sigma-E factor negative regulatory protein RseA
K03598 rseB; sigma-E factor negative regulatory protein RseB
K03803 rseC; sigma-E factor negative regulatory protein RseC
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Transcription elongation factors
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K06204 dksA; RNA polymerase-binding transcription factor
K03624 greA; transcription elongation factor GreA
K04760 greB; transcription elongation factor GreB
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Transcription termination factor
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K03628 rho; transcription termination factor Rho
K19000 rof; Rho-binding antiterminator
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Archaeal type
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Transcription Machinery