| T00012 | bbu | Borreliella burgdorferi B31 |
| T00807 | bbz | Borreliella burgdorferi ZS7 |
| T02075 | bbn | Borreliella burgdorferi N40 |
| T02081 | bbj | Borreliella burgdorferi JD1 |
| T02794 | bbur | Borreliella burgdorferi CA382 |
| T00194 | bga | Borrelia garinii subsp. bavariensis |
| T02048 | bgb | Borreliella garinii BgVir |
| T02299 | bgn | Borreliella garinii NMJW1 |
| T03259 | bgs | Borreliella garinii SZ |
| T04731 | bgc | Borreliella garinii CIP 103362 |
| T00383 | baf | Borrelia afzelii (FLI) |
| T02093 | bafz | Borrelia afzelii (Maryland) |
| T02298 | bafh | Borreliella afzelii HLJ01 |
| T03256 | baft | Borreliella afzelii Tom3107 |
| T03895 | bafe | Borreliella afzelii K78 |
| T01593 | bbs | Borreliella bissettiae |
| T03221 | bvt | Borreliella valaisiana |
| T03543 | bchi | Borrelia chilensis |
| T04886 | bmay | Borreliella mayonii |
| T09185 | btud | Borrelia turdi |
| T09196 | bku | Borreliella kurtenbachii |
| T09223 | bff | Borrelia finlandensis |
| T09230 | blus | Borrelia lusitaniae |
| T09264 | bame | Borreliella americana |
| T09301 | byn | Borreliella yangtzensis |
| T09309 | bjo | Borreliella japonica |
| T09315 | bspi | Borreliella spielmanii |
| T09320 | blan | Borreliella lanei |
| T09333 | bcaf | Borreliella californiensis |
| T09341 | batn | Borrelia tanukii |
| T09353 | bcaz | Borreliella carolinensis |
| T09475 | band | Borreliella andersonii |
| T09575 | bsin | Borreliella sinica |
| T07005 | bmat | Borrelia maritima |
| T00737 | btu | Borrelia turicatae |
| T00764 | bhr | Borrelia hermsii DAH |
| T03871 | bhi | Borrelia hermsii CC1 |
| T00768 | bdu | Borrelia duttonii |
| T00769 | bre | Borrelia recurrentis |
| T02051 | bcw | Borrelia crocidurae |
| T02797 | bmo | Borrelia miyamotoi LB-2001 |
| T03577 | bmiy | Borrelia miyamotoi CT14D4 |
| T03987 | bpak | Borrelia parkeri |
| T04727 | bane | Borrelia anserina |
| T05670 | btur | Borrelia turcica |
| T08173 | bcoi | Borrelia coriaceae |
| T08229 | bpur | Borrelia puertoricensis |
| T08772 | boq | Borrelia sp. HM |
| T08848 | bvw | Borrelia venezuelensis |
| T09149 | bfai | Candidatus Borrelia fainii |
| T09752 | bny | Borrelia nietonii |
| T10492 | borr | Candidatus Borrelia mahuryensis |
| T11856 | btac | Candidatus Borrelia tachyglossi |
| T11889 | buw | Candidatus Borrelia undatumii |
| T01287 | ssm | Sediminispirochaeta smaragdinae |
| T01811 | sfc | Spirochaeta africana |
| T06210 | sper | Thiospirochaeta perfilievii |
| T03013 | slr | Salinispira pacifica |
| T06177 | ock | Oceanispirochaeta crateris |
| T08829 | ecul | Entomospira culicis |
| T10560 | enem | Entomospira nematocerorum |
| T10561 | eet | Entomospira entomophila |
| T09917 | hpri | Candidatus Haliotispira prima |
| T01439 | sbu | Sphaerochaeta globosa |
| T01673 | sgp | Sphaerochaeta pleomorpha |
| T08141 | sass | Sphaerochaeta associata |
| T01469 | scc | Parasphaerochaeta coccoides |
| T11959 | pcah | Pleomorphochaeta caudata |
| T00016 | tpa | Treponema pallidum subsp. pallidum Nichols |
| T02709 | tpw | Treponema pallidum subsp. pallidum Nichols |
| T00716 | tpp | Treponema pallidum subsp. pallidum SS14 |
| T01748 | tpu | Treponema pallidum subsp. pallidum DAL-1 |
| T01868 | tph | Treponema pallidum subsp. pallidum Chicago |
| T02273 | tpo | Treponema pallidum subsp. pallidum Mexico A |
| T03185 | tpas | Treponema pallidum subsp. pallidum Sea 81-4 |
| T01749 | tpc | Treponema pallidum subsp. pertenue CDC2 |
| T01750 | tpg | Treponema pallidum subsp. pertenue Gauthier |
| T01751 | tpm | Treponema pallidum subsp. pertenue SamoaD |
| T02651 | tpb | Treponema pallidum Fribourg-Blanc |
| T00157 | tde | Treponema denticola |
| T01461 | tsu | Treponema succinifaciens |
| T01489 | tbe | Treponema brennaborense |
| T01507 | tpi | Treponema primitia |
| T01555 | tpl | Treponema paraluiscuniculi Cuniculi A |
| T09221 | tpaa | Treponema paraluiscuniculi L2 |
| T02803 | tped | Treponema pedis |
| T03278 | tpk | Treponema putidum |
| T03454 | trm | Treponema sp. OMZ 838 |
| T06342 | tphg | Treponema phagedenis |
| T06435 | trz | Treponema vincentii |
| T06877 | trc | Treponema rectale |
| T07166 | tri | Treponema ruminis |
| T07199 | tpav | Treponema parvum |
| T07695 | tmed | Treponema medium |
| T07715 | tper | Treponema peruense |
| T08383 | tsk | Treponema socranskii subsp. buccale |
| T09263 | trp | Treponema sp. OMZ 803 |
| T08309 | bpaa | Brucepastera parasyntrophica |
| T01506 | taz | Leadbettera azotonutricia |
| T01573 | scd | Gracilinema caldarium |
| T07248 | bhc | Breznakiella homolactica |
| T01315 | sta | Winmispira thermophila DSM 6192 |
| T02016 | stq | Winmispira thermophila DSM 6578 |
| T00865 | bhy | Brachyspira hyodysenteriae WA1 |
| T04742 | bhd | Brachyspira hyodysenteriae ATCC 27164 |
| T11262 | bhyb | Brachyspira hyodysenteriae B204 |
| T11265 | bhyj | Brachyspira hyodysenteriae JR80 |
| T01229 | brm | Brachyspira murdochii |
| T01278 | bpo | Brachyspira pilosicoli 95/1000 |
| T02225 | bpj | Brachyspira pilosicoli B2904 |
| T02387 | bpip | Brachyspira pilosicoli P43/6/78 |
| T02412 | bpw | Brachyspira pilosicoli WesB |
| T01847 | bip | Brachyspira intermedia |
| T05655 | bhp | Brachyspira hampsonii |
| T08758 | taqu | Thermospira aquatica |
| T11945 | lmag | Longinema margulisiae |
| T00098 | lil | Leptospira interrogans serovar Lai 56601 |
| T01983 | lie | Leptospira interrogans serovar Lai IPAV |
| T00166 | lic | Leptospira interrogans serovar Copenhageni |
| T03859 | lis | Leptospira interrogans serovar Linhai |
| T00404 | lbj | Leptospira borgpetersenii JB197 |
| T00405 | lbl | Leptospira borgpetersenii L550 |
| T00693 | lbi | Leptospira biflexa serovar Patoc Patoc 1 (Paris) |
| T00712 | lbf | Leptospira biflexa serovar Patoc Patoc 1 (Ames) |
| T03999 | lst | Leptospira santarosai |
| T04558 | laj | Leptospira tipperaryensis |
| T05598 | lmay | Leptospira mayottensis |
| T05705 | lkm | Leptospira kmetyi |
| T06081 | lwl | Leptospira weilii |
| T07530 | lkb | Leptospira kobayashii |
| T08353 | lno | Leptospira noguchii |
| T08837 | lkr | Leptospira kirschneri |
| T10745 | lmil | Leptospira milleri |
| T10746 | liow | Leptospira iowaensis |
| T10747 | lgor | Leptospira gorisiae |
| T10765 | lmgo | Leptospira mgodei |
| T10766 | lcin | Leptospira cinconiae |
| T02157 | tpx | Turneriella parva |