KEGG pathway modules

Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:T30204_00010 T30204_01200 T30204_01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH:T30204_00010 T30204_01200 T30204_01230 T30204_01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH:T30204_00010 T30204_00020 T30204_01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:T30204_00010 T30204_00020 T30204_00620 T30204_00785 T30204_01200 T30204_01210 T30204_01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:T30204_00020 T30204_01200 T30204_01210 T30204_01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH:T30204_00030 T30204_01200 T30204_01100 T30204_01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose-6P => ribulose-5P [PATH:T30204_00030 T30204_01200 T30204_01100 T30204_01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose-6P => ribose-5P [PATH:T30204_00030 T30204_01200 T30204_01230 T30204_01100 T30204_01120]
M00005 PRPP biosynthesis, ribose-5P => PRPP [PATH:T30204_00030 T30204_00230 T30204_01200 T30204_01230 T30204_01100]

Other carbohydrate metabolism
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:T30204_00052 T30204_01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:T30204_00500 T30204_01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:T30204_00500 T30204_01100]

Energy metabolism
Carbon fixation
M00168 CAM (Crassulacean acid metabolism), dark [PATH:T30204_00620 T30204_00710 T30204_01200 T30204_01100 T30204_01120]
M00169 CAM (Crassulacean acid metabolism), light [PATH:T30204_00620 T30204_00710 T30204_01200 T30204_01100 T30204_01120]
M00579 Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:T30204_00430 T30204_00620 T30204_00720 T30204_01200 T30204_01100 T30204_01120]

Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
M00150 Fumarate reductase, prokaryotes [PATH:T30204_00190 T30204_01100]
M00157 F-type ATPase, prokaryotes and chloroplasts [PATH:T30204_00190 T30204_00195 T30204_01100]

Lipid metabolism
Fatty acid metabolism
M00082 Fatty acid biosynthesis, initiation [PATH:T30204_00061 T30204_01212 T30204_01100]
M00083 Fatty acid biosynthesis, elongation [PATH:T30204_00061 T30204_01212 T30204_01100]
M00086 beta-Oxidation, acyl-CoA synthesis [PATH:T30204_00061 T30204_00071 T30204_01212 T30204_01100]

Sterol biosynthesis
Lipid metabolism
M00093 Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:T30204_00564 T30204_01100]

Nucleotide metabolism
Purine metabolism
M00048 De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:T30204_00230 T30204_01100]
M00049 Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:T30204_00230 T30204_01232 T30204_01240 T30204_01100]
M00050 Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:T30204_00230 T30204_01232 T30204_01100]
M00053 Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:T30204_00230 T30204_00240 T30204_01232 T30204_01100]

Pyrimidine metabolism
M00052 Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:T30204_00240 T30204_01232 T30204_01240 T30204_01100]
M00938 Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:T30204_00240 T30204_01232 T30204_01100]

Amino acid metabolism
Serine and threonine metabolism
M00020 Serine biosynthesis, glycerate-3P => serine [PATH:T30204_00260 T30204_00680 T30204_01200 T30204_01230 T30204_01100]
M00018 Threonine biosynthesis, aspartate => homoserine => threonine [PATH:T30204_00260 T30204_01230 T30204_01100 T30204_01110]

Cysteine and methionine metabolism
M00021 Cysteine biosynthesis, serine => cysteine [PATH:T30204_00270 T30204_00920 T30204_01320 T30204_01200 T30204_01230 T30204_01100 T30204_01110]
M00017 Methionine biosynthesis, aspartate => homoserine => methionine [PATH:T30204_00270 T30204_01230 T30204_01100]

Branched-chain amino acid metabolism
M00019 Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:T30204_00290 T30204_00770 T30204_01210 T30204_01230 T30204_01100 T30204_01110]
M00570 Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:T30204_00290 T30204_01230 T30204_01100]
M00432 Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:T30204_00290 T30204_01210 T30204_01230 T30204_01100 T30204_01110]

Lysine metabolism
M00525 Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine [PATH:T30204_00300 T30204_01230 T30204_01100]
M00527 Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:T30204_00300 T30204_01230 T30204_01100 T30204_01110]

Arginine and proline metabolism
M00844 Arginine biosynthesis, ornithine => arginine [PATH:T30204_00220 T30204_01230 T30204_01100]
M00015 Proline biosynthesis, glutamate => proline [PATH:T30204_00330 T30204_01230 T30204_01100]
M00970 Proline degradation, proline => glutamate [PATH:T30204_00330 T30204_01100]

Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
M00022 Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:T30204_00400 T30204_01230 T30204_01100 T30204_01110]
M00023 Tryptophan biosynthesis, chorismate => tryptophan [PATH:T30204_00400 T30204_01230 T30204_01100 T30204_01110]
M00024 Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:T30204_00400 T30204_01230 T30204_01100 T30204_01110]
M00025 Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:T30204_00400 T30204_01230 T30204_01100]

Other amino acid metabolism
Glycan metabolism
Nucleotide sugar biosynthesis
M00995 UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc [PATH:T30204_00520 T30204_01250 T30204_01100]
M00549 UDP-Glc biosynthesis, Glc => UDP-Glc [PATH:T30204_00520 T30204_01250 T30204_01100]
M01004 UDP-Galf biosynthesis, UDP-Glc => UDP-Galf [PATH:T30204_00520 T30204_00052 T30204_01250 T30204_01100]
M00554 UDP-Gal biosynthesis, Gal => UDP-Gal [PATH:T30204_00520 T30204_00052 T30204_01250 T30204_01100]
M00923 UDP-L-FucNAc biosynthesis, UDP-GlcNAc => UDP-L-FucNAc [PATH:T30204_00541 T30204_01250 T30204_01100]
M00063 CMP-KDO biosynthesis, ribulose-5P => CMP-KDO [PATH:T30204_00541 T30204_01250 T30204_01100]
M00922 CMP-Neu5Ac biosynthesis, bacteria, UDP-GlcNAc => CMP-Neu5Ac [PATH:T30204_00541 T30204_01250 T30204_01100]
M00064 ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep [PATH:T30204_00541 T30204_01250 T30204_01100]
M00793 dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha [PATH:T30204_00521 T30204_00523 T30204_00541 T30204_01250 T30204_01100 T30204_01110]

Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
M00060 KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:T30204_00540 T30204_01100]

Other polysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:T30204_00730 T30204_01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:T30204_00740 T30204_01240 T30204_01100 T30204_01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:T30204_00770 T30204_01240 T30204_01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:T30204_00780 T30204_01240 T30204_01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:T30204_00780 T30204_01240 T30204_01100]
M00577 Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin [PATH:T30204_00780 T30204_01240 T30204_01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:T30204_00785 T30204_01240 T30204_01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:T30204_00790 T30204_00670 T30204_01240 T30204_01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:T30204_00790 T30204_01240 T30204_01100]
M00988 PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine [PATH:T30204_00790 T30204_01100]
M00140 C1-unit interconversion, prokaryotes [PATH:T30204_00670 T30204_01240 T30204_01100]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:T30204_00860 T30204_01240 T30204_01100 T30204_01110]

Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
M00096 C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:T30204_00900 T30204_01100 T30204_01110]

Terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Biosynthesis of other compounds
Xenobiotics biodegradation
Aromatics degradation

Gene set
Pathogenicity
Drug resistance
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity