KEGG Modules

Carbohydrate metabolism
Central carbohydrate metabolism
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH:abaa00010 abaa00020 abaa01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:abaa00010 abaa00020 abaa00620 abaa01200 abaa01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH:abaa00020 abaa01200 abaa01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:abaa00020 abaa01200 abaa01210 abaa01230 abaa01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:abaa00020 abaa01200 abaa01100]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:abaa00030 abaa01200 abaa01230 abaa01100 abaa01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH:abaa00030 abaa00230 abaa01200 abaa01230 abaa01100]

Other carbohydrate metabolism
M00012 Glyoxylate cycle [PATH:abaa00630 abaa01200 abaa01100 abaa01110]

Energy metabolism
Carbon fixation
M00168 CAM (Crassulacean acid metabolism), dark [PATH:abaa00620 abaa01200 abaa01100 abaa01120]
M00579 Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:abaa00430 abaa00620 abaa01200 abaa01100 abaa01120]

Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
M00144 NADH:quinone oxidoreductase, prokaryotes [PATH:abaa00190]
M00149 Succinate dehydrogenase, prokaryotes [PATH:abaa00190]
M00153 Cytochrome bd ubiquinol oxidase [PATH:abaa00190]
M00417 Cytochrome o ubiquinol oxidase [PATH:abaa00190]
M00157 F-type ATPase, prokaryotes and chloroplasts [PATH:abaa00190]

Lipid metabolism
Fatty acid metabolism
M00083 Fatty acid biosynthesis, elongation [PATH:abaa00061 abaa01212 abaa01100]
M00086 beta-Oxidation, acyl-CoA synthesis [PATH:abaa00061 abaa00071 abaa01212 abaa01100]
M00087 beta-Oxidation [PATH:abaa00071 abaa01212 abaa01100]

Sterol biosynthesis
Lipid metabolism
M00093 Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:abaa00564 abaa01100]

Nucleotide metabolism
Purine metabolism
M00048 Inosine monophosphate biosynthesis, PRPP + glutamine => IMP [PATH:abaa00230 abaa01100]
M00049 Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:abaa00230 abaa01240 abaa01100]
M00050 Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:abaa00230 abaa01100]
M00546 Purine degradation, xanthine => urea [PATH:abaa00230 abaa01100]

Pyrimidine metabolism
M00052 Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:abaa00240 abaa01240 abaa01100]
M00053 Pyrimidine deoxyribonuleotide biosynthesis, CDP => dCTP [PATH:abaa00240]
M00938 Pyrimidine deoxyribonuleotide biosynthesis, UDP => dTTP [PATH:abaa00240]

Amino acid metabolism
Serine and threonine metabolism
M00020 Serine biosynthesis, glycerate-3P => serine [PATH:abaa00260 abaa00680 abaa01200 abaa01230 abaa01100]
M00018 Threonine biosynthesis, aspartate => homoserine => threonine [PATH:abaa00260 abaa01230 abaa01100 abaa01110]
M00555 Betaine biosynthesis, choline => betaine [PATH:abaa00260 abaa01100]

Cysteine and methionine metabolism
M00021 Cysteine biosynthesis, serine => cysteine [PATH:abaa00270 abaa00920 abaa01200 abaa01230 abaa01100 abaa01110]

Branched-chain amino acid metabolism
M00019 Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:abaa00290 abaa00770 abaa01210 abaa01230 abaa01100 abaa01110]
M00570 Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:abaa00290 abaa01230 abaa01100]
M00432 Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:abaa00290 abaa01210 abaa01230 abaa01100 abaa01110]

Lysine metabolism
M00016 Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:abaa00300 abaa01230 abaa01100]

Arginine and proline metabolism
M00028 Ornithine biosynthesis, glutamate => ornithine [PATH:abaa00220 abaa01210 abaa01230 abaa01100]
M00844 Arginine biosynthesis, ornithine => arginine [PATH:abaa00220 abaa01230 abaa01100]
M00015 Proline biosynthesis, glutamate => proline [PATH:abaa00330 abaa01230 abaa01100]
M00879 Arginine succinyltransferase pathway, arginine => glutamate [PATH:abaa00330 abaa01100]

Polyamine biosynthesis
Histidine metabolism
M00045 Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:abaa00340 abaa01100]

Aromatic amino acid metabolism
M00022 Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:abaa00400 abaa01230 abaa01100 abaa01110]
M00023 Tryptophan biosynthesis, chorismate => tryptophan [PATH:abaa00400 abaa01230 abaa01100 abaa01110]
M00024 Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:abaa00400 abaa01230 abaa01100 abaa01110]
M00040 Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:abaa00400 abaa01230 abaa01100 abaa01110]

Other amino acid metabolism
M00118 Glutathione biosynthesis, glutamate => glutathione [PATH:abaa00480 abaa01240 abaa01100]

Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
M00063 CMP-KDO biosynthesis [PATH:abaa00540 abaa01100]

Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:abaa00730 abaa01100]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:abaa00770 abaa01240 abaa01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:abaa00780 abaa01240 abaa01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:abaa00780 abaa01240 abaa01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:abaa00785 abaa01240 abaa01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:abaa00790 abaa00670 abaa01240 abaa01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:abaa00860 abaa01240 abaa01100 abaa01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:abaa00860 abaa01240 abaa01100 abaa01110]

Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Aromatics degradation
M00551 Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:abaa00362 abaa00622 abaa01220 abaa01100 abaa01120]
M00637 Anthranilate degradation, anthranilate => catechol [PATH:abaa00627 abaa01100 abaa01120]
M00568 Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:abaa00362 abaa01220 abaa01100 abaa01120]

Gene set
Pathogenicity
Drug resistance
M00851 Carbapenem resistance [PATH:abaa01501]
M00642 Multidrug resistance, efflux pump MexJK-OprM
M00698 Multidrug resistance, efflux pump BpeEF-OprC

Plant pathogenicity
Symbiosis
Module set
Metabolic capacity