KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: bme00010 bme01200 bme01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: bme00010 bme01200 bme01230 bme01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: bme00010 bme00020 bme01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: bme00010 bme00020 bme00620 bme00785 bme01200 bme01210 bme01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: bme00020 bme01200 bme01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: bme00020 bme01200 bme01210 bme01230 bme01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: bme00020 bme01200 bme01210 bme01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: bme00030 bme01200 bme01100 bme01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: bme00030 bme01200 bme01100 bme01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: bme00030 bme01200 bme01230 bme01100 bme01120]
M00580 Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH: bme00030 bme01200 bme01230 bme01100 bme01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: bme00030 bme00230 bme01200 bme01230 bme01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: bme00030 bme01200 bme01100 bme01120]
Other carbohydrate metabolism
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:bme00040 bme00030 bme01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:bme00052 bme01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:bme00052 bme01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:bme00500 bme01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:bme00520 bme01250 bme01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:bme00520 bme00052 bme01250 bme01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:bme00520 bme01250 bme01100]
M00012 Glyoxylate cycle [PATH:bme00630 bme01200 bme01100 bme01110]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:bme00280 bme00630 bme00640 bme01200 bme01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:bme00730 bme01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:bme00740 bme01240 bme01100 bme01110]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:bme00750 bme01240 bme01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:bme00760 bme01240 bme01100]
M00622 Nicotinate degradation, nicotinate => fumarate [PATH:bme00760 bme01100 bme01120]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:bme00770 bme01240 bme01100 bme01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:bme00770 bme01240 bme01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:bme00780 bme01240 bme01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:bme00780 bme01240 bme01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:bme00785 bme01240 bme01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:bme00785 bme01240 bme01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:bme00790 bme00670 bme01240 bme01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:bme00790 bme01240 bme01100]
M00140 C1-unit interconversion, prokaryotes [PATH:bme00670 bme01240 bme01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:bme00860 bme01240 bme01100 bme01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:bme00860 bme01240 bme01100 bme01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:bme00860 bme01240 bme01100]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:bme00860 bme01240 bme01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:bme00860 bme01240 bme01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:bme00130 bme01240 bme01100 bme01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:bme00130 bme01240 bme01100 bme01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00627 beta-Lactam resistance, Bla system [PATH:bme01501]
M00643 Multidrug resistance, efflux pump MexXY-OprM
M00649 Multidrug resistance, efflux pump AdeABC [PATH:bme01501]
M00698 Multidrug resistance, efflux pump BpeEF-OprC
M00700 Multidrug resistance, efflux pump AbcA
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
|
|