KEGG Modules

Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:bsus00010 bsus01200 bsus01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH:bsus00010 bsus01200 bsus01230 bsus01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH:bsus00010 bsus00020 bsus01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:bsus00010 bsus00020 bsus00620 bsus00785 bsus01200 bsus01210 bsus01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH:bsus00020 bsus01200 bsus01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:bsus00020 bsus01200 bsus01210 bsus01230 bsus01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:bsus00020 bsus01200 bsus01210 bsus01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH:bsus00030 bsus01200 bsus01100 bsus01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:bsus00030 bsus01200 bsus01100 bsus01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:bsus00030 bsus01200 bsus01230 bsus01100 bsus01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH:bsus00030 bsus00230 bsus01200 bsus01230 bsus01100]

Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:bsus00040 bsus00030 bsus01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:bsus00052 bsus01100]
M00982 Methylcitrate cycle [PATH:bsus00640 bsus00020 bsus01200 bsus01100 bsus01120]

Energy metabolism
Carbon fixation
M00579 Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:bsus00430 bsus00620 bsus00720 bsus01200 bsus01100 bsus01120]

Methane metabolism
M00345 Formaldehyde assimilation, ribulose monophosphate pathway [PATH:bsus00030 bsus00680 bsus01200 bsus01230 bsus01100 bsus01120]

Nitrogen metabolism
M00531 Assimilatory nitrate reduction, nitrate => ammonia [PATH:bsus00910 bsus01310 bsus01100 bsus01120]

Sulfur metabolism
M00176 Assimilatory sulfate reduction, sulfate => H2S [PATH:bsus00920 bsus01320 bsus01100 bsus01120]

Photosynthesis
ATP synthesis
M00151 Cytochrome bc1 complex respiratory unit [PATH:bsus00190 bsus01100]
M00155 Cytochrome c oxidase, prokaryotes [PATH:bsus00190 bsus01100]
M00416 Cytochrome aa3-600 menaquinol oxidase [PATH:bsus00190 bsus01100]
M00157 F-type ATPase, prokaryotes and chloroplasts [PATH:bsus00190 bsus01100]

Lipid metabolism
Fatty acid metabolism
M00082 Fatty acid biosynthesis, initiation [PATH:bsus00061 bsus01212 bsus01100]
M00083 Fatty acid biosynthesis, elongation [PATH:bsus00061 bsus01212 bsus01100]
M00086 beta-Oxidation, acyl-CoA synthesis [PATH:bsus00061 bsus00071 bsus01212 bsus01100]

Sterol biosynthesis
Lipid metabolism
M00093 Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:bsus00564 bsus01100]

Nucleotide metabolism
Purine metabolism
M00048 De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:bsus00230 bsus01100]
M00049 Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:bsus00230 bsus01232 bsus01240 bsus01100]
M00053 Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:bsus00230 bsus00240 bsus01232 bsus01100]
M00958 Adenine ribonucleotide degradation, AMP => Urate [PATH:bsus00230 bsus01232 bsus01100]
M00959 Guanine ribonucleotide degradation, GMP => Urate [PATH:bsus00230 bsus01232 bsus01100]

Pyrimidine metabolism
M00052 Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:bsus00240 bsus01232 bsus01240 bsus01100]
M00938 Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:bsus00240 bsus01232 bsus01100]

Amino acid metabolism
Serine and threonine metabolism
M00020 Serine biosynthesis, glycerate-3P => serine [PATH:bsus00260 bsus00680 bsus01200 bsus01230 bsus01100]
M00018 Threonine biosynthesis, aspartate => homoserine => threonine [PATH:bsus00260 bsus01230 bsus01100 bsus01110]
M00621 Glycine cleavage system [PATH:bsus00260 bsus00630 bsus00670 bsus00785 bsus01200 bsus01100]
M00555 Betaine biosynthesis, choline => betaine [PATH:bsus00260 bsus00670 bsus01100]

Cysteine and methionine metabolism
M00021 Cysteine biosynthesis, serine => cysteine [PATH:bsus00270 bsus00920 bsus01320 bsus01200 bsus01230 bsus01100 bsus01110]
M00609 Cysteine biosynthesis, methionine => cysteine [PATH:bsus00270 bsus01230 bsus01100]
M00017 Methionine biosynthesis, aspartate => homoserine => methionine [PATH:bsus00270 bsus01230 bsus01100]
M00034 Methionine salvage pathway [PATH:bsus00270 bsus01100]

Branched-chain amino acid metabolism
M00019 Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:bsus00290 bsus00770 bsus01210 bsus01230 bsus01100 bsus01110]
M00570 Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:bsus00290 bsus01230 bsus01100]
M00432 Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:bsus00290 bsus01210 bsus01230 bsus01100 bsus01110]

Lysine metabolism
M00525 Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine [PATH:bsus00300 bsus01230 bsus01100]

Arginine and proline metabolism
M00028 Ornithine biosynthesis, glutamate => ornithine [PATH:bsus00220 bsus01210 bsus01230 bsus01100]
M00844 Arginine biosynthesis, ornithine => arginine [PATH:bsus00220 bsus01230 bsus01100]
M00015 Proline biosynthesis, glutamate => proline [PATH:bsus00330 bsus01230 bsus01100]
M00970 Proline degradation, proline => glutamate [PATH:bsus00330 bsus01100]
M00972 Proline metabolism [PATH:bsus00330 bsus01100]

Polyamine biosynthesis
M00133 Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:bsus00330 bsus01100]

Histidine metabolism
M00045 Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:bsus00340 bsus01100]

Aromatic amino acid metabolism
M00022 Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:bsus00400 bsus01230 bsus01100 bsus01110]

Other amino acid metabolism
Glycan metabolism
Nucleotide sugar biosynthesis
M00909 UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc [PATH:bsus00520 bsus01250 bsus01100]
M00995 UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc [PATH:bsus00520 bsus01250 bsus01100]
M00549 UDP-Glc biosynthesis, Glc => UDP-Glc [PATH:bsus00520 bsus01250 bsus01100]
M00554 UDP-Gal biosynthesis, Gal => UDP-Gal [PATH:bsus00520 bsus00052 bsus01250 bsus01100]
M00793 dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha [PATH:bsus00521 bsus00523 bsus00541 bsus01250 bsus01100 bsus01110]

Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Other polysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00895 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/glycine) => TMP/TPP [PATH:bsus00730 bsus01240 bsus01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:bsus00730 bsus01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:bsus00740 bsus01240 bsus01100 bsus01110]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:bsus00750 bsus01240 bsus01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:bsus00760 bsus01240 bsus01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:bsus00770 bsus01240 bsus01100 bsus01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:bsus00770 bsus01240 bsus01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:bsus00780 bsus01240 bsus01100]
M00573 Biotin biosynthesis, BioI pathway, long-chain-acyl-ACP => pimeloyl-ACP => biotin [PATH:bsus00780 bsus01240 bsus01100]
M00577 Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin [PATH:bsus00780 bsus01240 bsus01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:bsus00785 bsus01240 bsus01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:bsus00790 bsus00670 bsus01240 bsus01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:bsus00790 bsus01240 bsus01100]
M00988 PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine [PATH:bsus00790 bsus01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:bsus00860 bsus01240 bsus01100 bsus01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:bsus00860 bsus01240 bsus01100]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:bsus00130 bsus01240 bsus01100 bsus01110]

Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
M00096 C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:bsus00900 bsus01100 bsus01110]
M00364 C10-C20 isoprenoid biosynthesis, bacteria [PATH:bsus00900 bsus01100 bsus01110]

Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
M00877 Kanosamine biosynthesis, glucose 6-phosphate => kanosamine [PATH:bsus00998 bsus01100 bsus01110]
M00787 Bacilysin biosynthesis, prephenate => bacilysin [PATH:bsus00998 bsus01100 bsus01110]

Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Aromatics degradation

Gene set
Pathogenicity
Drug resistance
M00700 Multidrug resistance, efflux pump AbcA

Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation