KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: ebu00010 ebu01200 ebu01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: ebu00010 ebu01200 ebu01230 ebu01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: ebu00010 ebu00020 ebu01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: ebu00010 ebu00020 ebu00620 ebu00785 ebu01200 ebu01210 ebu01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: ebu00020 ebu01200 ebu01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: ebu00020 ebu01200 ebu01210 ebu01230 ebu01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: ebu00020 ebu01200 ebu01210 ebu01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: ebu00030 ebu01200 ebu01100 ebu01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: ebu00030 ebu01200 ebu01100 ebu01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: ebu00030 ebu01200 ebu01230 ebu01100 ebu01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: ebu00030 ebu00230 ebu01200 ebu01230 ebu01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: ebu00030 ebu01200 ebu01100 ebu01120]
Other carbohydrate metabolism
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:ebu00040 ebu00030 ebu01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:ebu00052 ebu01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:ebu00053 ebu01100 ebu01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:ebu00500 ebu01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:ebu00500 ebu01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:ebu00520 ebu01250 ebu01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:ebu00520 ebu00052 ebu01250 ebu01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:ebu00520 ebu01250 ebu01100]
M00012 Glyoxylate cycle [PATH:ebu00630 ebu01200 ebu01100 ebu01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: ebu00730 ebu01240 ebu01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: ebu00730 ebu01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: ebu00740 ebu01240 ebu01100 ebu01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: ebu00750 ebu01240 ebu01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: ebu00760 ebu01240 ebu01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: ebu00770 ebu01240 ebu01100 ebu01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: ebu00770 ebu01240 ebu01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: ebu00780 ebu01240 ebu01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: ebu00780 ebu01240 ebu01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: ebu00785 ebu01240 ebu01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: ebu00790 ebu00670 ebu01240 ebu01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: ebu00790 ebu01240 ebu01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: ebu00860 ebu01240 ebu01100 ebu01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: ebu00860 ebu01240 ebu01100 ebu01110]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH: ebu00860 ebu01240 ebu01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: ebu00860 ebu01240 ebu01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: ebu00130 ebu01240 ebu01100 ebu01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: ebu00130 ebu01240 ebu01100 ebu01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00696 Multidrug resistance, efflux pump AcrEF-TolC
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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