KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: ecok00010 ecok01200 ecok01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: ecok00010 ecok01200 ecok01230 ecok01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: ecok00010 ecok00020 ecok01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: ecok00010 ecok00020 ecok00620 ecok00785 ecok01200 ecok01210 ecok01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: ecok00020 ecok01200 ecok01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: ecok00020 ecok01200 ecok01210 ecok01230 ecok01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: ecok00020 ecok01200 ecok01210 ecok01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: ecok00030 ecok01200 ecok01100 ecok01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: ecok00030 ecok01200 ecok01100 ecok01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: ecok00030 ecok01200 ecok01230 ecok01100 ecok01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: ecok00030 ecok00230 ecok01200 ecok01230 ecok01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: ecok00030 ecok01200 ecok01100 ecok01120]
Other carbohydrate metabolism
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Nucleotide sugar biosynthesis
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Other polysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: ecok00730 ecok01240 ecok01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: ecok00730 ecok01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: ecok00740 ecok01240 ecok01100 ecok01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: ecok00750 ecok01240 ecok01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: ecok00760 ecok01240 ecok01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: ecok00770 ecok01240 ecok01100 ecok01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: ecok00770 ecok01240 ecok01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: ecok00780 ecok01240 ecok01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: ecok00780 ecok01240 ecok01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: ecok00785 ecok01240 ecok01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: ecok00790 ecok00670 ecok01240 ecok01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: ecok00790 ecok01240 ecok01100]
M00988 PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine [PATH: ecok00790 ecok01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: ecok00860 ecok01240 ecok01100 ecok01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: ecok00860 ecok01240 ecok01100 ecok01110]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: ecok00130 ecok01240 ecok01100 ecok01110]
M00989 Ubiquinone biosynthesis, O2-independent, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: ecok00130 ecok01240 ecok01100 ecok01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: ecok00130 ecok01240 ecok01100 ecok01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00696 Multidrug resistance, efflux pump AcrEF-TolC
M00697 Multidrug resistance, efflux pump MdtEF-TolC
M00746 Multidrug resistance, repression of porin OmpF
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00616 Sulfate-sulfur assimilation
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