KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: hpa00010 hpa01200 hpa01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: hpa00010 hpa01200 hpa01230 hpa01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: hpa00010 hpa00020 hpa01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: hpa00010 hpa00020 hpa00620 hpa01200 hpa01210 hpa01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: hpa00020 hpa01200 hpa01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: hpa00020 hpa01200 hpa01210 hpa01230 hpa01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: hpa00020 hpa01200 hpa01210 hpa01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: hpa00030 hpa01200 hpa01100 hpa01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: hpa00030 hpa01200 hpa01100 hpa01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: hpa00030 hpa01200 hpa01230 hpa01100 hpa01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: hpa00030 hpa00230 hpa01200 hpa01230 hpa01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: hpa00030 hpa01200 hpa01100 hpa01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:hpa00040 hpa00030 hpa01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:hpa00040 hpa00030 hpa01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:hpa00052 hpa01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:hpa00052 hpa01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:hpa01100 hpa01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:hpa00500 hpa01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:hpa00500 hpa01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:hpa00520 hpa01250 hpa01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:hpa00520 hpa00052 hpa01250 hpa01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:hpa00520 hpa01250 hpa01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:hpa00520 hpa01100]
M00012 Glyoxylate cycle [PATH:hpa00630 hpa01200 hpa01100 hpa01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Other polysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: hpa00730 hpa01240 hpa01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: hpa00730 hpa01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: hpa00740 hpa01240 hpa01100 hpa01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: hpa00750 hpa01240 hpa01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: hpa00760 hpa01240 hpa01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: hpa00770 hpa01240 hpa01100 hpa01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: hpa00770 hpa01240 hpa01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: hpa00780 hpa01240 hpa01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: hpa00780 hpa01240 hpa01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: hpa01240 hpa01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: hpa00790 hpa00670 hpa01240 hpa01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: hpa00790 hpa01240 hpa01100]
M00140 C1-unit interconversion, prokaryotes [PATH: hpa00670 hpa01240 hpa01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: hpa00860 hpa01240 hpa01100 hpa01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: hpa00860 hpa01240 hpa01100 hpa01110]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH: hpa00860 hpa01240 hpa01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: hpa00860 hpa01240 hpa01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: hpa00130 hpa01240 hpa01100 hpa01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: hpa00130 hpa01240 hpa01100 hpa01110]
M00931 Menaquinone biosynthesis, modified futalosine pathway [PATH: hpa00130 hpa01240 hpa01100]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
M00564 Helicobacter pylori pathogenicity signature, cagA pathogenicity island [PATH:hpa05120]
Drug resistance
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00616 Sulfate-sulfur assimilation
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