KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: kpu00010 kpu01200 kpu01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: kpu00010 kpu01200 kpu01230 kpu01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: kpu00010 kpu00020 kpu01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: kpu00010 kpu00020 kpu00620 kpu00785 kpu01200 kpu01210 kpu01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: kpu00020 kpu01200 kpu01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: kpu00020 kpu01200 kpu01210 kpu01230 kpu01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: kpu00020 kpu01200 kpu01210 kpu01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: kpu00030 kpu01200 kpu01100 kpu01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: kpu00030 kpu01200 kpu01100 kpu01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: kpu00030 kpu01200 kpu01230 kpu01100 kpu01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: kpu00030 kpu00230 kpu01200 kpu01230 kpu01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: kpu00030 kpu01200 kpu01100 kpu01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:kpu00040 kpu00030 kpu01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:kpu00040 kpu00030 kpu01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:kpu00052 kpu01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:kpu00052 kpu01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:kpu00053 kpu01100 kpu01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:kpu00500 kpu01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:kpu00500 kpu01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:kpu00520 kpu01250 kpu01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:kpu00520 kpu00052 kpu01250 kpu01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:kpu00520 kpu01250 kpu01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:kpu00520 kpu01100]
M00012 Glyoxylate cycle [PATH:kpu00630 kpu01200 kpu01100 kpu01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: kpu00730 kpu01240 kpu01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: kpu00730 kpu01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: kpu00740 kpu01240 kpu01100 kpu01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: kpu00750 kpu01240 kpu01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: kpu00760 kpu01240 kpu01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: kpu00770 kpu01240 kpu01100 kpu01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: kpu00770 kpu01240 kpu01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: kpu00780 kpu01240 kpu01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: kpu00780 kpu01240 kpu01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: kpu00785 kpu01240 kpu01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH: kpu00785 kpu01240 kpu01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: kpu00790 kpu00670 kpu01240 kpu01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: kpu00790 kpu01240 kpu01100]
M00140 C1-unit interconversion, prokaryotes [PATH: kpu00670 kpu01240 kpu01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: kpu00860 kpu01240 kpu01100 kpu01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: kpu00860 kpu01240 kpu01100 kpu01110]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH: kpu00860 kpu01240 kpu01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: kpu00860 kpu01240 kpu01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: kpu00130 kpu01240 kpu01100 kpu01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: kpu00130 kpu01240 kpu01100 kpu01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00696 Multidrug resistance, efflux pump AcrEF-TolC
M00746 Multidrug resistance, repression of porin OmpF
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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