KEGG Modules

Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:malv00010 malv01200 malv01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH:malv00010 malv01200 malv01230 malv01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH:malv00010 malv00020 malv01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:malv00010 malv00020 malv00620 malv00785 malv01200 malv01210 malv01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH:malv00020 malv01200 malv01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:malv00020 malv01200 malv01210 malv01230 malv01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:malv00020 malv01200 malv01210 malv01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH:malv00030 malv01200 malv01100 malv01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:malv00030 malv01200 malv01100 malv01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:malv00030 malv01200 malv01230 malv01100 malv01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH:malv00030 malv00230 malv01200 malv01230 malv01100]

Other carbohydrate metabolism
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:malv00500 malv01100]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:malv00280 malv00630 malv00640 malv01200 malv01100]
M00982 Methylcitrate cycle [PATH:malv00640 malv00020 malv01200 malv01100 malv01120]

Energy metabolism
Carbon fixation
M00579 Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:malv00430 malv00620 malv00720 malv01200 malv01100 malv01120]

Methane metabolism
Nitrogen metabolism
M00530 Dissimilatory nitrate reduction, nitrate => ammonia [PATH:malv00910 malv01310 malv01100 malv01120]

Sulfur metabolism
M00176 Assimilatory sulfate reduction, sulfate => H2S [PATH:malv00920 malv01320 malv01100 malv01120]

Photosynthesis
ATP synthesis
M00144 NADH:quinone oxidoreductase, prokaryotes [PATH:malv00190 malv01100]
M00149 Succinate dehydrogenase, prokaryotes [PATH:malv00190 malv01100]
M00151 Cytochrome bc1 complex respiratory unit [PATH:malv00190 malv01100]
M00155 Cytochrome c oxidase, prokaryotes [PATH:malv00190 malv01100]
M00157 F-type ATPase, prokaryotes and chloroplasts [PATH:malv00190 malv01100]

Lipid metabolism
Fatty acid metabolism
M00082 Fatty acid biosynthesis, initiation [PATH:malv00061 malv01212 malv01100]
M00083 Fatty acid biosynthesis, elongation [PATH:malv00061 malv01212 malv01100]
M00086 beta-Oxidation, acyl-CoA synthesis [PATH:malv00061 malv00071 malv01212 malv01100]
M00087 beta-Oxidation [PATH:malv00071 malv01212 malv01100]
M00887 Mycolic acid biosynthesis, meromycolic acid + alpha-carboxyacyl-CoA + trehalose => TMM => TDM/mAGP/GMM [PATH:malv00074]

Sterol biosynthesis
Lipid metabolism
M00093 Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:malv00564 malv01100]

Nucleotide metabolism
Purine metabolism
M00048 De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:malv00230 malv01100]
M00049 Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:malv00230 malv01232 malv01240 malv01100]
M00050 Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:malv00230 malv01232 malv01100]
M00053 Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:malv00230 malv00240 malv01232 malv01100]

Pyrimidine metabolism
M00052 Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:malv00240 malv01232 malv01240 malv01100]
M00938 Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:malv00240 malv01232 malv01100]

Amino acid metabolism
Serine and threonine metabolism
M00020 Serine biosynthesis, glycerate-3P => serine [PATH:malv00260 malv00680 malv01200 malv01230 malv01100]
M00018 Threonine biosynthesis, aspartate => homoserine => threonine [PATH:malv00260 malv01230 malv01100 malv01110]
M00621 Glycine cleavage system [PATH:malv00260 malv00630 malv00670 malv00785 malv01200 malv01100]
M00033 Ectoine biosynthesis, aspartate => ectoine [PATH:malv00260 malv01210 malv01230 malv01100 malv01120]

Cysteine and methionine metabolism
M00338 Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:malv00260 malv00270 malv00670 malv01230 malv01100]
M00035 Methionine degradation [PATH:malv00270 malv00670 malv01100]

Branched-chain amino acid metabolism
M00019 Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:malv00290 malv00770 malv01210 malv01230 malv01100 malv01110]
M00570 Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:malv00290 malv01230 malv01100]
M00432 Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:malv00290 malv01210 malv01230 malv01100 malv01110]

Lysine metabolism
M00016 Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:malv00300 malv01230 malv01100]

Arginine and proline metabolism
M00028 Ornithine biosynthesis, glutamate => ornithine [PATH:malv00220 malv01210 malv01230 malv01100]
M00844 Arginine biosynthesis, ornithine => arginine [PATH:malv00220 malv01230 malv01100]
M00978 Ornithine-ammonia cycle [PATH:malv00220 malv01100 malv01110]
M00015 Proline biosynthesis, glutamate => proline [PATH:malv00330 malv01230 malv01100]
M00970 Proline degradation, proline => glutamate [PATH:malv00330 malv01100]
M00972 Proline metabolism [PATH:malv00330 malv01100]

Polyamine biosynthesis
Histidine metabolism
M00026 Histidine biosynthesis, PRPP => histidine [PATH:malv00340 malv01230 malv01100 malv01110]

Aromatic amino acid metabolism
Other amino acid metabolism
M00027 GABA (gamma-Aminobutyrate) shunt [PATH:malv00250 malv00650 malv01100]

Glycan metabolism
Nucleotide sugar biosynthesis
M00909 UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc [PATH:malv00520 malv01250 malv01100]
M00995 UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc [PATH:malv00520 malv01250]
M00549 UDP-Glc biosynthesis, Glc => UDP-Glc [PATH:malv00520 malv01250 malv01100]
M01004 UDP-Galf biosynthesis, UDP-Glc => UDP-Galf [PATH:malv00520 malv00052 malv01250]
M01000 GDP-Man biosynthesis, Fru-6P => GDP-Man [PATH:malv00520 malv01250]
M00793 dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha [PATH:malv00521 malv00523 malv00541 malv01250 malv01100 malv01110]

Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Other polysaccharide metabolism
M00888 Galactofuranan biosynthesis, decaprenyl phosphate + UDP-GlcNAc (+ dTDP-Rha/UDP-Galf) => GL-5 [PATH:malv00572]

Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:malv00750 malv01240 malv01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:malv00760 malv01240 malv01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:malv00770 malv01240 malv01100 malv01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:malv00770 malv01240 malv01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:malv00780 malv01240 malv01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:malv00785 malv01240 malv01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:malv00790 malv00670 malv01240 malv01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:malv00860 malv01240 malv01100 malv01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:malv00860 malv01240 malv01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:malv00860 malv01240 malv01100]

Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Aromatics degradation
M00545 Trans-cinnamate degradation, trans-cinnamate => acetyl-CoA [PATH:malv00360 malv01220 malv01100 malv01120]

Gene set
Pathogenicity
Drug resistance
M00627 beta-Lactam resistance, Bla system [PATH:malv01501]

Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00616 Sulfate-sulfur assimilation