KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00002 Glycolysis, core module involving three-carbon compounds [PATH:pbc00010 pbc01200 pbc01230 pbc01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pbc00010 pbc00020 pbc01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pbc00010 pbc00020 pbc00620 pbc00785 pbc01200 pbc01210 pbc01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH:pbc00020 pbc01200 pbc01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pbc00020 pbc01200 pbc01210 pbc01230 pbc01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pbc00020 pbc01200 pbc01210 pbc01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pbc00030 pbc01200 pbc01100 pbc01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pbc00030 pbc01200 pbc01100 pbc01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pbc00030 pbc01200 pbc01230 pbc01100 pbc01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH:pbc00030 pbc00230 pbc01200 pbc01230 pbc01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pbc00030 pbc01200 pbc01100 pbc01120]
Other carbohydrate metabolism
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Nucleotide sugar biosynthesis
M00909 UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc [PATH:pbc00520 pbc01250 pbc01100]
M00996 UDP-MurNAc biosynthesis, anhMurNAc => UDP-MurNAc [PATH:pbc00520 pbc01250 pbc01100 pbc01100]
M00995 UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc [PATH:pbc00520 pbc01250 pbc01100]
M00549 UDP-Glc biosynthesis, Glc => UDP-Glc [PATH:pbc00520 pbc01250 pbc01100]
M00999 UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA [PATH:pbc00520 pbc00053 pbc01250 pbc01100]
M01000 GDP-Man biosynthesis, Fru-6P => GDP-Man [PATH:pbc00520 pbc01250 pbc01100]
M00063 CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO [PATH:pbc00541 pbc01250 pbc01100]
M01014 UDP-ManNAcA biosynthesis, UDP-GlcNAc => UDP-ManNAcA [PATH:pbc00541]
M00793 dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha [PATH:pbc00521 pbc00523 pbc00541 pbc01250 pbc01100 pbc01110]
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Other polysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pbc00740 pbc01240 pbc01100 pbc01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pbc00750 pbc01240 pbc01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pbc00760 pbc01240 pbc01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:pbc00770 pbc01240 pbc01100 pbc01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:pbc00770 pbc01240 pbc01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:pbc00780 pbc01240 pbc01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pbc00780 pbc01240 pbc01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pbc00785 pbc01240 pbc01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:pbc00790 pbc00670 pbc01240 pbc01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pbc00790 pbc01240 pbc01100]
M00988 PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine [PATH:pbc00790 pbc01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pbc00860 pbc01240 pbc01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pbc00130 pbc01240 pbc01100 pbc01110]
M00989 Ubiquinone biosynthesis, O2-independent, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pbc00130 pbc01240 pbc01100 pbc01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00745 Imipenem resistance, repression of porin OprD
M00641 Multidrug resistance, efflux pump MexEF-OprN
M00642 Multidrug resistance, efflux pump MexJK-OprM
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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