KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: prh00010 prh01200 prh01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: prh00010 prh01200 prh01230 prh01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: prh00010 prh00020 prh01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: prh00010 prh00020 prh00620 prh00785 prh01200 prh01210 prh01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: prh00020 prh01200 prh01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: prh00020 prh01200 prh01210 prh01230 prh01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: prh00020 prh01200 prh01210 prh01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: prh00030 prh01200 prh01100 prh01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: prh00030 prh01200 prh01100 prh01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: prh00030 prh01200 prh01230 prh01100 prh01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: prh00030 prh00230 prh01200 prh01230 prh01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: prh00030 prh01200 prh01100 prh01120]
Other carbohydrate metabolism
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Nucleotide sugar biosynthesis
M00909 UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc [PATH:prh00520 prh01250 prh01100]
M00996 UDP-MurNAc biosynthesis, anhMurNAc => UDP-MurNAc [PATH:prh00520 prh01250 prh01100 prh01100]
M00995 UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc [PATH:prh00520 prh01250 prh01100]
M00549 UDP-Glc biosynthesis, Glc => UDP-Glc [PATH:prh00520 prh01250 prh01100]
M01004 UDP-Galf biosynthesis, UDP-Glc => UDP-Galf [PATH:prh00520 prh00052 prh01250 prh01100]
M00999 UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA [PATH:prh00520 prh00053 prh01250 prh01100]
M00554 UDP-Gal biosynthesis, Gal => UDP-Gal [PATH:prh00520 prh00052 prh01250 prh01100]
M01000 GDP-Man biosynthesis, Fru-6P => GDP-Man [PATH:prh00520 prh01250 prh01100]
M01036 UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA [PATH:prh00541]
M01009 UDP-QuiNAc biosynthesis, UDP-GlcNAc => UDP-QuiNAc [PATH:prh00541]
M00063 CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO [PATH:prh00541 prh01250 prh01100]
M00793 dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha [PATH:prh00521 prh00523 prh00541 prh01250 prh01100 prh01110]
M01016 GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc [PATH:prh00541]
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Other polysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:prh00740 prh01240 prh01100 prh01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:prh00750 prh01240 prh01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:prh00760 prh01240 prh01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:prh00770 prh01240 prh01100 prh01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:prh00770 prh01240 prh01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:prh00780 prh01240 prh01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:prh00780 prh01240 prh01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:prh00785 prh01240 prh01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:prh00790 prh00670 prh01240 prh01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:prh00790 prh01240 prh01100]
M00988 PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine [PATH:prh00790 prh01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:prh00860 prh01240 prh01100 prh01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:prh00860 prh01240 prh01100 prh01110]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:prh00860 prh01240 prh01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:prh00130 prh01240 prh01100 prh01110]
M00989 Ubiquinone biosynthesis, O2-independent, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:prh00130 prh01240 prh01100 prh01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00627 beta-Lactam resistance, Bla system [PATH:prh01501]
M00745 Imipenem resistance, repression of porin OprD
M00641 Multidrug resistance, efflux pump MexEF-OprN
M00642 Multidrug resistance, efflux pump MexJK-OprM
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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