KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: sel00010 sel01200 sel01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: sel00010 sel01200 sel01230 sel01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: sel00010 sel00020 sel01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: sel00010 sel00020 sel00620 sel00785 sel01200 sel01210 sel01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: sel00020 sel01200 sel01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: sel00020 sel01200 sel01210 sel01230 sel01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: sel00020 sel01200 sel01210 sel01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: sel00030 sel01200 sel01100 sel01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: sel00030 sel01200 sel01100 sel01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: sel00030 sel01200 sel01230 sel01100 sel01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: sel00030 sel00230 sel01200 sel01230 sel01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: sel00030 sel01200 sel01100 sel01120]
Other carbohydrate metabolism
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:sel00040 sel00030 sel01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:sel00052 sel01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:sel00052 sel01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:sel00053 sel01100 sel01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:sel00500 sel01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:sel00500 sel01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:sel00520 sel01250 sel01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:sel00520 sel00052 sel01250 sel01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:sel00520 sel01250 sel01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:sel00520 sel01100]
M00012 Glyoxylate cycle [PATH:sel00630 sel01200 sel01100 sel01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: sel00730 sel01240 sel01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: sel00730 sel01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: sel00740 sel01240 sel01100 sel01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: sel00750 sel01240 sel01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: sel00760 sel01240 sel01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: sel00770 sel01240 sel01100 sel01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: sel00770 sel01240 sel01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: sel00780 sel01240 sel01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: sel00780 sel01240 sel01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: sel00785 sel01240 sel01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: sel00790 sel00670 sel01240 sel01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: sel00790 sel01240 sel01100]
M00140 C1-unit interconversion, prokaryotes [PATH: sel00670 sel01240 sel01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: sel00860 sel01240 sel01100 sel01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: sel00860 sel01240 sel01100 sel01110]
M00847 Heme biosynthesis, archaea, siroheme => heme [PATH: sel00860 sel01240 sel01100 sel01110]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH: sel00860 sel01240 sel01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: sel00860 sel01240 sel01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: sel00130 sel01240 sel01100 sel01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: sel00130 sel01240 sel01100 sel01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00744 Cationic antimicrobial peptide (CAMP) resistance, protease PgtE
M00696 Multidrug resistance, efflux pump AcrEF-TolC
Plant pathogenicity
Symbiosis
Module set
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