KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: sene00010 sene01200 sene01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: sene00010 sene01200 sene01230 sene01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: sene00010 sene00020 sene01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: sene00010 sene00020 sene00620 sene00785 sene01200 sene01210 sene01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: sene00020 sene01200 sene01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: sene00020 sene01200 sene01210 sene01230 sene01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: sene00020 sene01200 sene01210 sene01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: sene00030 sene01200 sene01100 sene01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: sene00030 sene01200 sene01100 sene01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: sene00030 sene01200 sene01230 sene01100 sene01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: sene00030 sene00230 sene01200 sene01230 sene01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: sene00030 sene01200 sene01100 sene01120]
Other carbohydrate metabolism
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Nucleotide sugar biosynthesis
M00909 UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc [PATH:sene00520 sene01250 sene01100]
M00995 UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc [PATH:sene00520 sene01250 sene01100]
M00549 UDP-Glc biosynthesis, Glc => UDP-Glc [PATH:sene00520 sene01250 sene01100]
M00554 UDP-Gal biosynthesis, Gal => UDP-Gal [PATH:sene00520 sene00052 sene01250 sene01100]
M01000 GDP-Man biosynthesis, Fru-6P => GDP-Man [PATH:sene00520 sene01250 sene01100]
M00063 CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO [PATH:sene00541 sene01250 sene01100]
M01014 UDP-ManNAcA biosynthesis, UDP-GlcNAc => UDP-ManNAcA [PATH:sene00541]
M00064 ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep [PATH:sene00541 sene01250 sene01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:sene00541 sene01100]
M01016 GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc [PATH:sene00541]
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Other polysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: sene00730 sene01240 sene01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: sene00730 sene01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: sene00740 sene01240 sene01100 sene01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: sene00750 sene01240 sene01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: sene00760 sene01240 sene01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: sene00770 sene01240 sene01100 sene01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: sene00770 sene01240 sene01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: sene00780 sene01240 sene01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: sene00780 sene01240 sene01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: sene00785 sene01240 sene01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: sene00790 sene00670 sene01240 sene01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: sene00790 sene01240 sene01100]
M00988 PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine [PATH: sene00790 sene01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: sene00860 sene01240 sene01100 sene01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: sene00860 sene01240 sene01100 sene01110]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH: sene00860 sene01240 sene01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: sene00860 sene01240 sene01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: sene00130 sene01240 sene01100 sene01110]
M00989 Ubiquinone biosynthesis, O2-independent, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: sene00130 sene01240 sene01100 sene01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: sene00130 sene01240 sene01100 sene01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00744 Cationic antimicrobial peptide (CAMP) resistance, protease PgtE
M00696 Multidrug resistance, efflux pump AcrEF-TolC
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00616 Sulfate-sulfur assimilation
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