KEGG Modules

Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:zju00010 zju01200 zju01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH:zju00010 zju01200 zju01230 zju01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH:zju00010 zju00020 zju01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:zju00010 zju00020 zju00620 zju00785 zju01200 zju01210 zju01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH:zju00020 zju01200 zju01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:zju00020 zju01200 zju01210 zju01230 zju01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:zju00020 zju01200 zju01210 zju01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH:zju00030 zju01200 zju01100]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:zju00030 zju01200 zju01100]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:zju00030 zju01200 zju01230 zju01100]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH:zju00030 zju00230 zju01200 zju01230 zju01100]

Other carbohydrate metabolism
M00081 Pectin degradation [PATH:zju00040 zju01100]
M00114 Ascorbate biosynthesis, plants, fructose-6P => ascorbate [PATH:zju00051 zju00053 zju01240 zju01100 zju01110]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:zju00500 zju01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:zju00520 zju01250 zju01100]
M00892 UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH:zju00520 zju01250 zju01100]
M00012 Glyoxylate cycle [PATH:zju00630 zju01200 zju01100 zju01110]
M00532 Photorespiration [PATH:zju00630 zju01200 zju01100 zju01110]
M00132 Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH:zju00562 zju01100]

Energy metabolism
Carbon fixation
M00165 Reductive pentose phosphate cycle (Calvin cycle) [PATH:zju00710 zju01200 zju01100]
M00168 CAM (Crassulacean acid metabolism), dark [PATH:zju00620 zju00710 zju01200 zju01100]
M00169 CAM (Crassulacean acid metabolism), light [PATH:zju00620 zju00710 zju01200 zju01100]
M00172 C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:zju00620 zju00710 zju01200 zju01100]
M00171 C4-dicarboxylic acid cycle, NAD - malic enzyme type [PATH:zju00710 zju01200 zju01100]
M00170 C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type [PATH:zju00710 zju01200 zju01100]

Methane metabolism
Nitrogen metabolism
M00531 Assimilatory nitrate reduction, nitrate => ammonia [PATH:zju00910 zju01100]

Sulfur metabolism
M00176 Assimilatory sulfate reduction, sulfate => H2S [PATH:zju00920 zju01100]

Photosynthesis
M00161 Photosystem II [PATH:zju00195 zju01100]
M00163 Photosystem I [PATH:zju00195 zju01100]

ATP synthesis
M00145 NAD(P)H:quinone oxidoreductase, chloroplasts and cyanobacteria [PATH:zju00190 zju01100]
M00142 NADH:ubiquinone oxidoreductase, mitochondria [PATH:zju00190 zju01100]
M00143 NADH dehydrogenase (ubiquinone) Fe-S protein/flavoprotein complex, mitochondria [PATH:zju00190 zju01100]
M00148 Succinate dehydrogenase (ubiquinone) [PATH:zju00190 zju01100]

Lipid metabolism
Fatty acid metabolism
M00082 Fatty acid biosynthesis, initiation [PATH:zju00061 zju01212 zju01100]
M00083 Fatty acid biosynthesis, elongation [PATH:zju00061 zju01212 zju01100]
M00415 Fatty acid elongation in endoplasmic reticulum [PATH:zju00062 zju01040 zju01212 zju01100]
M00086 beta-Oxidation, acyl-CoA synthesis [PATH:zju00061 zju00071 zju01212 zju01100]
M00087 beta-Oxidation [PATH:zju00071 zju01212 zju01100]

Sterol biosynthesis
M00917 Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol [PATH:zju00100 zju01100 zju01110]

Lipid metabolism
M00089 Triacylglycerol biosynthesis [PATH:zju00561 zju01100]
M00098 Acylglycerol degradation [PATH:zju00561 zju01100]
M00092 Phosphatidylethanolamine (PE) biosynthesis, ethanolamine => PE [PATH:zju00564 zju01100]
M00100 Sphingosine degradation [PATH:zju00600 zju01100]
M00113 Jasmonic acid biosynthesis [PATH:zju00592 zju01100 zju01110]

Nucleotide metabolism
Purine metabolism
M00049 Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:zju00230 zju01232 zju01240 zju01100]
M00050 Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:zju00230 zju01232 zju01100]
M00053 Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:zju00230 zju00240 zju01232 zju01100]

Pyrimidine metabolism
M00052 Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:zju00240 zju01232 zju01240 zju01100]
M00938 Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:zju00240 zju01232 zju01100]
M00046 Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:zju00240 zju00410 zju00770 zju01100]

Amino acid metabolism
Serine and threonine metabolism
M00020 Serine biosynthesis, glycerate-3P => serine [PATH:zju00260 zju01200 zju01230 zju01100]
M00018 Threonine biosynthesis, aspartate => homoserine => threonine [PATH:zju00260 zju01230 zju01100 zju01110]
M00621 Glycine cleavage system [PATH:zju00260 zju00630 zju00785 zju01200 zju01100]
M00555 Betaine biosynthesis, choline => betaine [PATH:zju00260 zju01100]

Cysteine and methionine metabolism
M00021 Cysteine biosynthesis, serine => cysteine [PATH:zju00270 zju00920 zju01200 zju01230 zju01100 zju01110]
M00034 Methionine salvage pathway [PATH:zju00270 zju01100]
M00368 Ethylene biosynthesis, methionine => ethylene [PATH:zju00270 zju01100 zju01110]

Branched-chain amino acid metabolism
M00019 Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:zju00290 zju00770 zju01210 zju01230 zju01100 zju01110]
M00570 Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:zju00290 zju01230 zju01100]
M00432 Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:zju00290 zju01210 zju01230 zju01100 zju01110]

Lysine metabolism
M00527 Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:zju00300 zju01230 zju01100 zju01110]

Arginine and proline metabolism
M00028 Ornithine biosynthesis, glutamate => ornithine [PATH:zju00220 zju01210 zju01230 zju01100]
M00844 Arginine biosynthesis, ornithine => arginine [PATH:zju00220 zju01230 zju01100]
M00015 Proline biosynthesis, glutamate => proline [PATH:zju00330 zju01230 zju01100]
M00970 Proline degradation, proline => glutamate [PATH:zju00330 zju01100]
M00972 Proline metabolism [PATH:zju00330 zju01100]

Polyamine biosynthesis
M00134 Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:zju00330 zju01100]

Histidine metabolism
M00026 Histidine biosynthesis, PRPP => histidine [PATH:zju00340 zju01230 zju01100 zju01110]

Aromatic amino acid metabolism
M00023 Tryptophan biosynthesis, chorismate => tryptophan [PATH:zju00400 zju01230 zju01100 zju01110]
M00910 Phenylalanine biosynthesis, chorismate => arogenate => phenylalanine [PATH:zju00400 zju01230 zju01100 zju01110]
M00040 Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:zju00400 zju01230 zju01100 zju01110]
M00044 Tyrosine degradation, tyrosine => homogentisate [PATH:zju00350 zju01100]
M00936 Melatonin biosynthesis, plants, tryptophan => serotonin => melatonin [PATH:zju00380 zju01100 zju01110]

Other amino acid metabolism
M00027 GABA (gamma-Aminobutyrate) shunt [PATH:zju00250 zju00650 zju01100]
M00118 Glutathione biosynthesis, glutamate => glutathione [PATH:zju00480 zju01240 zju01100]

Glycan metabolism
Glycan biosynthesis
M00073 N-glycan precursor trimming [PATH:zju00510 zju01100]

Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Other polysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00897 Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP [PATH:zju00730 zju01240 zju01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:zju00730 zju01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:zju00740 zju01240 zju01100 zju01110]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:zju00750 zju01240 zju01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:zju00760 zju01240 zju01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:zju00780 zju01240 zju01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:zju00785 zju01240 zju01100]
M00882 Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:zju00785 zju01240 zju01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:zju00790 zju01240 zju01100]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:zju00860 zju01240 zju01100 zju01110]
M00933 Plastoquinone biosynthesis, homogentisate + solanesyl-PP => plastoquinol [PATH:zju00130 zju01240 zju01100 zju01110]

Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
M00095 C5 isoprenoid biosynthesis, mevalonate pathway [PATH:zju00900 zju01100 zju01110]
M00096 C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:zju00900 zju01100 zju01110]
M00366 C10-C20 isoprenoid biosynthesis, plants [PATH:zju00900 zju01100 zju01110]

Plant terpenoid biosynthesis
M00372 Abscisic acid biosynthesis, beta-carotene => abscisic acid [PATH:zju00906 zju01100 zju01110]
M00371 Castasterone biosynthesis, campesterol => castasterone [PATH:zju00905 zju01100 zju01110]
M00927 Gibberellin A12 biosynthesis, GAPP => GA12 [PATH:zju00904 zju01100 zju01110]
M00928 Gibberellin A4/A1 biosynthesis, GA12/GA53 => GA4/GA1 [PATH:zju00904 zju01100 zju01110]

Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
M00039 Monolignol biosynthesis, phenylalanine/tyrosine => monolignol [PATH:zju00940 zju01100 zju01110]
M00137 Flavanone biosynthesis, phenylalanine => naringenin [PATH:zju00940 zju00941 zju01100 zju01110]
M00940 Flavanone biosynthesis, p-coumaroyl-CoA => liquiritigenin [PATH:zju00941 zju01100 zju01110]
M00138 Flavonoid biosynthesis, naringenin => pelargonidin [PATH:zju00941 zju01100 zju01110]

Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Aromatics degradation

Gene set
Pathogenicity
Drug resistance
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00611 Oxygenic photosynthesis in plants and cyanobacteria
M00615 Nitrate assimilation