SSDB Best Search Result

Entry:pmad:BAY61_14890 (335 a.a.)
Name:ATP-dependent DNA ligase

Search Result : 83 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
amd:AMED_4612 ATP-dependent DNA ligase                             314     1835     0.841      309     
rha:RHA1_ro05237 possible DNA ligase (ATP), C-terminal             323     1814     0.800      320     
kfl:Kfla_5287 DNA polymerase LigD, polymerase domain pr            335     1808     0.801      317     
nfa:NFA_13650 hypothetical protein                                 320     1661     0.735      321     
ase:ACPL_7020 DNA ligase (ATP)                                     319     1653     0.761      309     
nca:Noca_2445 putative DNA ligase (ATP), C-terminal                326     1628     0.716      320     
gpo:GPOL_c30660 DNA polymerase LigD                                318     1611     0.742      310     
sct:SCAT_5514 conserved protein of unknown function                335     1209     0.560      323     
stp:Strop_1543 DNA primase, small subunit                          341     1175     0.547      320     
sma:SAVERM_1696 putative DNA primase, small subunit                338     1167     0.543      324     
sco:SCO6709 conserved hypothetical protein                         341     1164     0.531      324     
sro:Sros_6714 DNA primase small subunit                            334     1147     0.521      326     
sgr:SGR_1023 conserved hypothetical protein                        345     1144     0.536      323     
sgu:SGLAU_28045 hypothetical protein                               336     1139     0.537      324     
mmi:MMAR_5265 conserved hypothetical protein                       346     1085     0.518      334     
sen:SACE_1849 possible DNA ligase (ATP)                            347     1079     0.513      298     
mul:MUL_4339 conserved hypothetical protein                        346     1076     0.514      329     
mab:MAB_0280 Conserved hypothetical protein                        306     1070     0.541      307     
mtu:Rv3730c hypothetical protein                                   346     1063     0.515      328     
mtc:MT3835 conserved hypothetical protein                          346     1063     0.515      328     
mva:Mvan_5542 conserved hypothetical protein                       349     1058     0.515      328     
msm:MSMEG_6301 DNA polymerase LigD, polymerase domain              350     1052     0.511      333     
rer:RER_49750 conserved hypothetical protein                       346      996     0.478      335     
ccyc:SCMU_06830 hypothetical protein                               727      823     0.432      303     
chy:CHY_0025 conserved hypothetical protein             K01971     293      582     0.336      286     
mta:Moth_2067 conserved hypothetical protein            K01971     312      570     0.342      301     
scl:sce3523 unnamed protein product; High confidence in K01971     762      524     0.341      293     
sme:SM_b20685 putative DNA ligase                                  818      518     0.342      284     
mlo:mll2077 probable ATP-dependent DNA ligase                      833      515     0.335      278     
eba:ebA6655 ATP-dependent DNA ligase                    K01971     742      514     0.336      321     
swi:Swit_3982 DNA ligase D                              K01971     837      510     0.370      262     
pae:PA2138 multifunctional non-homologous end joining p K01971     840      504     0.335      275     
phe:Phep_1702 DNA ligase D                              K01971     877      497     0.336      286     
bxe:Bxe_A2328 ATP-dependent DNA ligase LigD phosphoeste K01971    1001      491     0.329      289     
ret:RHE_PE00252 putative ATP-dependent DNA ligase prote K01971     882      491     0.338      290     
azc:AZC_1006 ATP-dependent DNA ligase                   K01971     900      488     0.339      283     
bps:BPSS2211 putative ATP-dependent DNA ligase          K01971    1159      487     0.342      272     
rpa:TX73_018915 DNA ligase D                            K01971     914      485     0.320      309     
pst:PSPTO_3464 DNA ligase, ATP-dependent, putative      K01971     851      484     0.322      286     
sml:Smlt2530 putative DNA ligase family protein         K01971     849      476     0.307      309     
nar:Saro_1695 ATP-dependent DNA ligase LigD phosphoeste K01971     843      474     0.341      267     
psb:Psyr_3245 ATP-dependent DNA ligase LigD phosphoeste K01971     866      473     0.314      296     
ssy:SLG_04290 putative DNA ligase                       K01971     835      472     0.324      259     
bja:bll6773 ORF_ID:bll6773; probable DNA ligase         K01971     892      472     0.310      319     
sjp:SJA_C1-12900 ATP-dependent DNA ligase               K01971     829      471     0.333      261     
rle:pRL120229 putative DNA ligase family protein        K01971     881      471     0.321      271     
pde:Pden_4186 conserved hypothetical protein            K01971     330      470     0.337      291     
atu:Atu5055 ATP-dependent DNA ligase                    K01971     884      470     0.323      288     
xau:Xaut_4365 DNA ligase D                              K01971     886      469     0.332      292     
sno:Snov_0819 DNA ligase D                              K01971     842      465     0.334      290     
reu:Reut_B4424 ATP-dependent DNA ligase LigD polymerase K01971     930      457     0.345      258     
oih:OB3034 hypothetical conserved protein               K01971     595      455     0.306      288     
ppu:PP_3260 DNA ligase D                                K01971     833      453     0.304      283     
reh:H16_B2352 ATP-dependent DNA ligase                  K01971     910      449     0.321      293     
sur:STAUR_6997 ATP dependent DNA ligase                 K01971     836      444     0.314      271     
brh:RBRH_02846 ATP-dependent DNA ligase (EC 6.5.1.1)    K01971     309      440     0.317      278     
rsp:RSP_2679 ATP-dependent DNA ligase LigD polymerase m K01971     868      438     0.310      281     
xac:XAC2414 ATP-dependent DNA ligase                    K01971     872      437     0.295      292     
xcc:XCC0105 ATP-dependent DNA ligase                    K01971    1001      429     0.315      279     
cpy:Cphy_1729 DNA ligase D                              K01971     813      423     0.311      264     
bsu:BSU13400 ATP-dependent DNA ligase YkoU              K01971     611      419     0.308      273     
dsy:DSY0616 hypothetical protein                        K01971     818      402     0.296      274     
pjd:Pjdr2_4985 DNA polymerase LigD, polymerase domain p K01971     304      382     0.270      289     
bha:BH2209 BH2209; unknown conserved protein            K01971     611      370     0.284      285     
bpf:BpOF4_18445 ATP-dependent DNA ligase                K01971     578      354     0.293      280     
ksk:KSE_05320 hypothetical protein                      K01971     173      272     0.377      151     
ehi:EHI_055650 alpha-amylase family protein                        419      138     0.245      204     
ath:AT3G54440 glycoside hydrolase family 2 protein      K01190    1108      124     0.217      345     
stm:STM0236 cell cycle protein                          K04075     430      124     0.274      157     
aor:AO090005000639 unnamed protein product; beta-N-acet K12373     600      123     0.244      213     
bfr:BF0953 putative outer membrane protein probably inv K21572     594      123     0.257      140     
ola:101171431 Meckel syndrome type 1 protein            K19332     563      121     0.258      124     
vg:8658838 Escherichia phage D108; terminase family pro            551      118     0.234      175     
nta:107795658 protein ENHANCED DISEASE RESISTANCE 2                729      115     0.262      145     
tcr:504109.130 hypothetical protein                                719      112     0.269      160     
yli:2907710 Isopentenyl-diphosphate Delta-isomerase     K01823     270      110     0.271      133     
tru:101077321 DNA primase small subunit                 K02684     424      108     0.308      78      
ral:Rumal_2117 polysaccharide deacetylase               K22278     233      108     0.281      121     
csv:101216729 metalloendoproteinase 2-MMP                          306      107     0.231      234     
tva:4775240 RNA polymerase II transcription regulator r            147      107     0.257      136     
cel:CELE_ZK822.2 SXP/RAL-2 family protein Ani s 5-like             168      100     0.206      102     
zga:ZOBELLIA_2247 Rrf2-type transcriptional regulator              144       99     0.311      61      
sly:138338543 uncharacterized protein                              241       96     0.290      100     

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