SSDB Best Search Result

Entry:samy:DB32_005756 (574 a.a.)
Name:ATP-dependent DNA ligase
KO:K01971 bifunctional non-homologous end joining protein LigD

Search Result : 103 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
sme:SMc03959 Probable ATP-dependent DNA ligase          K01971     865     1138     0.324      860     
ssy:SLG_04290 putative DNA ligase                       K01971     835     1120     0.335      820     
eba:ebA6655 ATP-dependent DNA ligase                    K01971     742     1116     0.342      713     
sno:Snov_0819 DNA ligase D                              K01971     842     1092     0.312      837     
amd:AMED_4189 ATP-dependent DNA ligase                  K01971     525     1088     0.368      579     
mlo:mll4606 ATP-dependent DNA ligase                    K01971     829     1078     0.326      818     
swi:Swit_3982 DNA ligase D                              K01971     837     1071     0.333      821     
nar:Saro_1695 ATP-dependent DNA ligase LigD phosphoeste K01971     843     1063     0.332      810     
sen:SACE_4181 ATP dependent DNA ligase                  K01971     647     1058     0.333      643     
sjp:SJA_C1-12900 ATP-dependent DNA ligase               K01971     829     1055     0.322      801     
reu:Reut_B4424 ATP-dependent DNA ligase LigD polymerase K01971     930     1029     0.309      825     
rsp:RSP_2679 ATP-dependent DNA ligase LigD polymerase m K01971     868     1025     0.309      841     
atu:Atu4632 ATP-dependent DNA ligase                    K01971     771     1022     0.326      769     
scl:sce3523 unnamed protein product; High confidence in K01971     762     1021     0.425      419     
azc:AZC_1006 ATP-dependent DNA ligase                   K01971     900     1018     0.316      882     
dsy:DSY0616 hypothetical protein                        K01971     818     1018     0.305      819     
bja:bll6773 ORF_ID:bll6773; probable DNA ligase         K01971     892     1016     0.314      885     
cpy:Cphy_1729 DNA ligase D                              K01971     813      992     0.302      804     
pae:PA2138 multifunctional non-homologous end joining p K01971     840      992     0.316      827     
ret:RHE_PE00252 putative ATP-dependent DNA ligase prote K01971     882      986     0.311      870     
reh:H16_B2352 ATP-dependent DNA ligase                  K01971     910      969     0.313      854     
rle:pRL120229 putative DNA ligase family protein        K01971     881      958     0.305      869     
sml:Smlt2530 putative DNA ligase family protein         K01971     849      946     0.301      846     
pst:PSPTO_3464 DNA ligase, ATP-dependent, putative      K01971     851      942     0.303      842     
psb:Psyr_3245 ATP-dependent DNA ligase LigD phosphoeste K01971     866      923     0.310      857     
xau:Xaut_4365 DNA ligase D                              K01971     886      907     0.302      861     
xcc:XCC2307 ATP-dependent DNA ligase                    K01971     849      884     0.293      850     
rpa:TX73_018915 DNA ligase D                            K01971     914      883     0.289      892     
ppu:PP_3260 DNA ligase D                                K01971     833      866     0.298      822     
bps:BPSS2211 putative ATP-dependent DNA ligase          K01971    1159      855     0.378      418     
xac:XAC2414 ATP-dependent DNA ligase                    K01971     872      841     0.290      872     
bxe:Bxe_A2328 ATP-dependent DNA ligase LigD phosphoeste K01971    1001      822     0.348      442     
pde:Pden_4186 conserved hypothetical protein            K01971     330      785     0.410      329     
sur:STAUR_6997 ATP dependent DNA ligase                 K01971     836      757     0.292      816     
brh:RBRH_02846 ATP-dependent DNA ligase (EC 6.5.1.1)    K01971     309      695     0.397      292     
phe:Phep_1702 DNA ligase D                              K01971     877      586     0.447      226     
sgu:SGLAU_27360 DNA polymerase LigD, polymerase domain- K01971     308      557     0.364      319     
det:DET0850 conserved hypothetical protein                         183      551     0.495      188     
sco:SCO7355 conserved hypothetical protein SC9H11.09c              213      540     0.452      208     
chy:CHY_0025 conserved hypothetical protein             K01971     293      531     0.337      282     
sma:SAVERM_1696 putative DNA primase, small subunit                338      512     0.343      265     
mab:MAB_1033 Putative ATP-dependent DNA ligase          K01971     750      510     0.415      229     
stp:Strop_3967 DNA primase, small subunit               K01971     302      509     0.357      258     
sct:SCAT_5514 conserved protein of unknown function                335      497     0.341      255     
mta:Moth_2082 conserved hypothetical protein            K01971     306      497     0.336      259     
mva:Mvan_5542 conserved hypothetical protein                       349      494     0.357      272     
mma:MM_0209 hypothetical protein                                   152      494     0.500      156     
msm:MSMEG_6301 DNA polymerase LigD, polymerase domain              350      492     0.342      301     
nca:Noca_2856 DNA primase-like protein                  K01971     455      490     0.257      571     
mac:MA_3428 conserved hypothetical protein                         156      490     0.509      163     
mba:Mbar_A2115 conserved hypothetical protein                      151      484     0.484      157     
pfl:PFL_6269 Hypothetical protein                       K01971     186      484     0.470      166     
mtu:Rv3730c hypothetical protein                                   346      484     0.346      301     
mtc:MT3835 conserved hypothetical protein                          346      484     0.346      301     
sgr:SGR_6488 conserved hypothetical protein                        187      478     0.434      175     
rha:RHA1_ro05108 possible DNA ligase (ATP), N-terminal             342      477     0.348      293     
ase:ACPL_519 DNA ligase (ATP)                           K01971     301      474     0.325      277     
rer:RER_49750 conserved hypothetical protein                       346      474     0.350      286     
mul:MUL_4339 conserved hypothetical protein                        346      472     0.344      288     
sro:Sros_6714 DNA primase small subunit                            334      471     0.323      266     
mmi:MMAR_5265 conserved hypothetical protein                       346      471     0.344      288     
nfa:NFA_25590 hypothetical protein                                 333      465     0.315      273     
kfl:Kfla_5287 DNA polymerase LigD, polymerase domain pr            335      462     0.322      283     
gpo:GPOL_c05170 putative ATP-dependent DNA ligase       K01971     812      453     0.446      184     
ccyc:SCMU_06830 hypothetical protein                               727      452     0.304      283     
pjd:Pjdr2_4985 DNA polymerase LigD, polymerase domain p K01971     304      445     0.306      252     
bpf:BpOF4_18445 ATP-dependent DNA ligase                K01971     578      410     0.306      284     
oih:OB3034 hypothetical conserved protein               K01971     595      387     0.306      255     
bha:BH2209 BH2209; unknown conserved protein            K01971     611      376     0.282      284     
bsu:BSU13400 ATP-dependent DNA ligase YkoU              K01971     611      353     0.279      247     
ksk:KSE_05320 hypothetical protein                      K01971     173      350     0.388      160     
cne:CNC00080 expressed protein                                     325      239     0.294      194     
xom:XOO2587 conserved hypothetical protein              K01971     116      210     0.530      66      
fvr:FVEG_00690 hypothetical protein                                816      160     0.279      208     
ppp:112275498 uncharacterized protein isoform X1                  1311      156     0.250      252     
mcc:705139 xylosyltransferase 2 isoform X2              K00771     865      155     0.225      400     
tcr:506529.300 hypothetical protein                                442      155     0.248      306     
maj:MAA_00743 ABC1 domain containing protein                       437      145     0.250      200     
tru:101075596 putative fructose-2,6-bisphosphatase TIGA K14634     283      145     0.249      241     
tbr:TB927.1.4230 hypothetical protein, conserved                   426      145     0.213      291     
plu:plu2420 unnamed protein product; Some similarities            1636      145     0.249      241     
mtr:112418622 CAX-interacting protein 4                            325      143     0.226      270     
nta:107814805 transcription initiation factor TFIID sub K14649     366      141     0.242      236     
ola:101175046 CXXC-type zinc finger protein 1 isoform X K14960     648      141     0.244      250     
ecb:100069824 protein MROH8 isoform X1                            1062      141     0.296      125     
mdm:114824824 uncharacterized protein                              328      139     0.299      177     
cit:102607092 uncharacterized protein LOC102607092                 328      138     0.246      260     
ppa:PAS_chr2-1_0216 Alpha (guanylyltransferase) subunit K00987     475      135     0.238      265     
vg:40088859 Arthrobacter phage Shade; hypothetical prot            206      133     0.258      186     
vvi:100244605 transcription factor MYB1                 K09422     301      132     0.223      269     
rcu:8259290 notchless protein homolog                   K14855     471      126     0.244      312     
cfa:119872821 uncharacterized protein LOC119872821                 214      124     0.232      198     
ana:alr0246 hypothetical protein                                   206      124     0.319      91      
sce:YDR291W ATP-dependent 3'-5' DNA helicase            K06877    1077      120     0.247      150     
sly:138338141 uncharacterized protein                              462      118     0.244      234     
cge:100761370 grpE protein homolog 2, mitochondrial     K03687     224      116     0.287      108     
rno:688777 grpE protein homolog 2, mitochondrial        K03687     224      113     0.287      108     
gmx:100818237 transcription factor MYB59 isoform X1     K09422     260      111     0.255      145     
zmo:ZMO1499 phosphoribosyl-ATP diphosphatase            K01523     107      109     0.323      96      
sot:107059057 receptor-like protein 12                             337      106     0.286      126     
cel:CELE_F45C12.17 DUF418 domain-containing protein                224      105     0.295      112     
gla:GL50803_007204 RNA recognition motif family protein            159      100     0.268      168     
smar:SM39_3127 hypothetical protein                                 76       96     0.346      52      

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