SSDB Best Search Result

Entry:sve:SVEN_6395 (343 a.a.)
Name:ATP-dependent DNA ligase

Search Result : 87 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
sma:SAVERM_1696 putative DNA primase, small subunit                338     1986     0.849      331     
sgu:SGLAU_28045 hypothetical protein                               336     1970     0.837      332     
sco:SCO6709 conserved hypothetical protein                         341     1931     0.809      335     
sgr:SGR_1023 conserved hypothetical protein                        345     1881     0.787      333     
sct:SCAT_5514 conserved protein of unknown function                335     1873     0.808      333     
kfl:Kfla_3722 DNA polymerase LigD, polymerase domain pr            352     1656     0.677      347     
stp:Strop_1543 DNA primase, small subunit                          341     1520     0.630      341     
sro:Sros_6714 DNA primase small subunit                            334     1473     0.619      331     
ase:ACPL_7075 DNA ligase (ATP)                                     341     1441     0.604      338     
sen:SACE_1849 possible DNA ligase (ATP)                            347     1439     0.577      343     
amd:AMED_2655 ATP-dependent DNA ligase                             338     1422     0.601      338     
mmi:MMAR_5265 conserved hypothetical protein                       346     1330     0.596      334     
gpo:GPOL_c47200 DNA primase, small subunit                         358     1324     0.562      345     
mtu:Rv3730c hypothetical protein                                   346     1318     0.584      334     
mtc:MT3835 conserved hypothetical protein                          346     1318     0.584      334     
mul:MUL_4339 conserved hypothetical protein                        346     1312     0.590      334     
rha:RHA1_ro05108 possible DNA ligase (ATP), N-terminal             342     1296     0.583      336     
msm:MSMEG_6301 DNA polymerase LigD, polymerase domain              350     1295     0.568      338     
nca:Noca_3665 conserved hypothetical protein                       360     1264     0.550      349     
rer:RER_49750 conserved hypothetical protein                       346     1262     0.560      336     
mva:Mvan_5542 conserved hypothetical protein                       349     1261     0.562      331     
nfa:NFA_13650 hypothetical protein                                 320     1201     0.551      314     
ccyc:SCMU_06830 hypothetical protein                               727     1144     0.504      335     
mab:MAB_0280 Conserved hypothetical protein                        306     1130     0.567      300     
mta:Moth_2082 conserved hypothetical protein            K01971     306      743     0.394      292     
chy:CHY_0025 conserved hypothetical protein             K01971     293      701     0.364      286     
mlo:mll2077 probable ATP-dependent DNA ligase                      833      594     0.346      286     
phe:Phep_1702 DNA ligase D                              K01971     877      578     0.320      294     
sme:SM_b20685 putative DNA ligase                                  818      576     0.348      276     
xcc:XCC0105 ATP-dependent DNA ligase                    K01971    1001      568     0.362      276     
rsp:RSP_2679 ATP-dependent DNA ligase LigD polymerase m K01971     868      560     0.355      262     
swi:Swit_3982 DNA ligase D                              K01971     837      553     0.356      247     
eba:ebA6655 ATP-dependent DNA ligase                    K01971     742      549     0.334      296     
pde:Pden_4186 conserved hypothetical protein            K01971     330      545     0.333      297     
azc:AZC_1006 ATP-dependent DNA ligase                   K01971     900      544     0.351      276     
sur:STAUR_6997 ATP dependent DNA ligase                 K01971     836      543     0.330      270     
scl:sce3523 unnamed protein product; High confidence in K01971     762      542     0.342      298     
bxe:Bxe_A2328 ATP-dependent DNA ligase LigD phosphoeste K01971    1001      539     0.340      294     
bps:BPSS2211 putative ATP-dependent DNA ligase          K01971    1159      537     0.371      248     
pae:PA2138 multifunctional non-homologous end joining p K01971     840      533     0.337      285     
psb:Psyr_3245 ATP-dependent DNA ligase LigD phosphoeste K01971     866      532     0.331      281     
reu:Reut_B4424 ATP-dependent DNA ligase LigD polymerase K01971     930      529     0.347      300     
sjp:SJA_C1-12900 ATP-dependent DNA ligase               K01971     829      525     0.336      247     
oih:OB3034 hypothetical conserved protein               K01971     595      525     0.342      295     
atu:Atu5055 ATP-dependent DNA ligase                    K01971     884      524     0.338      311     
ret:RHE_CH00617 putative DNA ligase protein             K01971     659      522     0.337      264     
dsy:DSY0616 hypothetical protein                        K01971     818      520     0.325      255     
cpy:Cphy_1729 DNA ligase D                              K01971     813      518     0.350      254     
bja:bll6773 ORF_ID:bll6773; probable DNA ligase         K01971     892      518     0.330      294     
nar:Saro_1695 ATP-dependent DNA ligase LigD phosphoeste K01971     843      515     0.339      254     
pst:PSPTO_3464 DNA ligase, ATP-dependent, putative      K01971     851      515     0.322      276     
ppu:PP_3260 DNA ligase D                                K01971     833      515     0.333      294     
sml:Smlt2530 putative DNA ligase family protein         K01971     849      514     0.316      297     
brh:RBRH_02846 ATP-dependent DNA ligase (EC 6.5.1.1)    K01971     309      511     0.351      271     
rle:pRL120229 putative DNA ligase family protein        K01971     881      509     0.334      293     
rpa:TX73_018915 DNA ligase D                            K01971     914      508     0.333      303     
xac:XAC2414 ATP-dependent DNA ligase                    K01971     872      505     0.329      292     
ssy:SLG_04290 putative DNA ligase                       K01971     835      501     0.317      265     
xau:Xaut_4365 DNA ligase D                              K01971     886      497     0.346      286     
bsu:BSU13400 ATP-dependent DNA ligase YkoU              K01971     611      497     0.327      278     
sno:Snov_0819 DNA ligase D                              K01971     842      496     0.323      266     
pjd:Pjdr2_4985 DNA polymerase LigD, polymerase domain p K01971     304      496     0.330      285     
reh:H16_B2352 ATP-dependent DNA ligase                  K01971     910      479     0.350      260     
bpf:BpOF4_18445 ATP-dependent DNA ligase                K01971     578      466     0.313      297     
bha:BH2209 BH2209; unknown conserved protein            K01971     611      464     0.328      271     
ksk:KSE_05320 hypothetical protein                      K01971     173      291     0.379      145     
tps:THAPSDRAFT_22799 predicted protein                            1209      138     0.259      201     
tre:TRIREDRAFT_79990 hypothetical protein                          680      131     0.235      307     
vg:65114338 Gordonia phage Danyall; hypothetical protei            136      130     0.314      105     
zma:100274081 uncharacterized protein LOC100274081                 323      130     0.228      241     
tru:101068085 sodium/potassium/calcium exchanger 2-like K13750     638      123     0.255      145     
sto:STK_22180 putative NADH-quinone oxidoreductase subu K00333     404      123     0.265      117     
nve:5508181 uncharacterized protein LOC5508181                     666      119     0.304      102     
mmu:74778 ribosomal RNA-processing protein 7 homolog A  K14545     280      119     0.275      182     
xtr:100485509 NXPE family member 3                                 529      115     0.296      142     
ppp:112290478 uncharacterized protein isoform X1        K23093     303      114     0.277      65      
cge:100771360 LOW QUALITY PROTEIN: ribosomal RNA-proces K14545     280      112     0.274      175     
ocu:100347248 neuronal acetylcholine receptor subunit b K04813     494      111     0.317      101     
sty:STY1396 putative exported protein                              277      111     0.254      138     
nta:107813811 putative jasmonic acid carboxyl methyltra K08241     382      110     0.259      143     
cel:CELE_C30H7.2 Thioredoxin domain-containing protein  K17264     411      110     0.333      72      
dre:100196920 sulfotransferase family 1, cytosolic sulf K01025     301      110     0.211      223     
ola:101169738 probable E3 ubiquitin-protein ligase RNF2            272      107     0.277      94      
gmx:102666313 uncharacterized protein LOC102666313                 229      106     0.232      142     
bth:BT_4622 mobilization protein BmgA                              299      104     0.260      127     
rfq:117031472 programmed cell death 1 ligand 2 isoform  K06708     284      102     0.275      109     
cit:127898757 endoglucanase 9-like                                 122       99     0.283      99      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]