KEGG   PATHWAY: cmk04310
Entry
cmk04310                    Pathway                                
Name
Wnt signaling pathway - Callorhinchus milii (elephant shark)
Description
Wnt proteins are secreted morphogens that are required for basic developmental processes, such as cell-fate specification, progenitor-cell proliferation and the control of asymmetric cell division, in many different species and organs. There are at least three different Wnt pathways: the canonical pathway, the planar cell polarity (PCP) pathway and the Wnt/Ca2+ pathway. In the canonical Wnt pathway, the major effect of Wnt ligand binding to its receptor is the stabilization of cytoplasmic beta-catenin through inhibition of the bea-catenin degradation complex. Beta-catenin is then free to enter the nucleus and activate Wnt-regulated genes through its interaction with TCF (T-cell factor) family transcription factors and concomitant recruitment of coactivators. Planar cell polarity (PCP) signaling leads to the activation of the small GTPases RHOA (RAS homologue gene-family member A) and RAC1, which activate the stress kinase JNK (Jun N-terminal kinase) and ROCK (RHO-associated coiled-coil-containing protein kinase 1) and leads to remodelling of the cytoskeleton and changes in cell adhesion and motility. WNT-Ca2+ signalling is mediated through G proteins and phospholipases and leads to transient increases in cytoplasmic free calcium that subsequently activate the kinase PKC (protein kinase C) and CAMKII (calcium calmodulin mediated kinase II) and the phosphatase calcineurin.
Class
Environmental Information Processing; Signal transduction
Pathway map
cmk04310  Wnt signaling pathway
cmk04310

Other DBs
GO: 0016055
Organism
Callorhinchus milii (elephant shark) [GN:cmk]
Gene
103189269  wnt1; protein Wnt-1 [KO:K03209]
103179360  wnt2; protein Wnt-2 [KO:K00182]
103182404  protein Wnt-2b-A [KO:K00182]
103187749  proto-oncogene Wnt-3 [KO:K00312]
103181434  wnt4; protein Wnt-4a [KO:K00408]
103176770  wnt5a; protein Wnt-5a [KO:K00444]
103181804  wnt5b; protein Wnt-5b isoform X1 [KO:K00444]
103190982  protein Wnt-6-like [KO:K00445]
103188488  wnt6b; protein Wnt-6 [KO:K00445]
103179433  wnt7bb; protein Wnt-7b isoform X1 [KO:K00572]
103185034  wnt7aa; wingless-type MMTV integration site family, member 7Aa [KO:K00572]
121852223  LOW QUALITY PROTEIN: protein Wnt-7b-like [KO:K00572]
103182768  wnt8b; protein Wnt-8b [KO:K00714]
103183727  protein Wnt-8 [KO:K00714]
103187750  wnt9b; protein Wnt-9b [KO:K01064]
103172868  LOW QUALITY PROTEIN: protein Wnt-9a-like [KO:K01064]
103190983  wnt10b; protein Wnt-10b [KO:K01357]
103190528  wnt10a; protein Wnt-10a [KO:K01357]
103178866  protein Wnt-11b [KO:K01384]
103190568  wnt11; protein Wnt-11 [KO:K01384]
103186123  wnt16; protein Wnt-16 [KO:K01558]
103177742  cerberus [KO:K01645]
103178801  notum2; carboxylesterase notum2 isoform X1 [KO:K19882] [EC:3.1.1.98]
103175578  notum1a; palmitoleoyl-protein carboxylesterase notum1a [KO:K19882] [EC:3.1.1.98]
103186105  wif1; wnt inhibitory factor 1 [KO:K01691]
103172819  sost; sclerostin [KO:K16834]
103180898  dkk1b; dickkopf-related protein 1b [KO:K02165]
103183677  dickkopf-related protein 2 isoform X1 [KO:K02165]
103187946  dkk2; dickkopf-related protein 2 [KO:K02165]
103191219  dickkopf-related protein 4 [KO:K02165]
103180565  serpinf1; pigment epithelium-derived factor precursor [KO:K19614]
103171861  secreted frizzled-related protein 1 [KO:K02166]
103189386  sfrp2; secreted frizzled-related protein 2 [KO:K02176]
103176512  frzb; secreted frizzled-related protein 3 [KO:K25481]
103183405  secreted frizzled-related protein 4 [KO:K02185]
103187309  rspo1; R-spondin-1 [KO:K19471]
103184589  rspo2; R-spondin-2 [KO:K23097]
103182300  rspo3; R-spondin-3 [KO:K23098]
103174981  lgr4; leucine-rich repeat-containing G-protein coupled receptor 4 [KO:K04309]
103185324  leucine-rich repeat-containing G-protein coupled receptor 5 [KO:K04308]
103179094  leucine-rich repeat-containing G-protein coupled receptor 6 [KO:K08399]
103180494  E3 ubiquitin-protein ligase RNF43 [KO:K15694] [EC:2.3.2.27]
103182223  znrf3; E3 ubiquitin-protein ligase znrf3 [KO:K16273] [EC:2.3.2.27]
103176843  frizzled-7-A [KO:K02432]
103181223  frizzled-1 [KO:K02432]
103183861  frizzled-2 [KO:K02235]
103188514  LOW QUALITY PROTEIN: frizzled-3 [KO:K02329]
103184383  fzd4; frizzled-4 [KO:K02354]
103176824  frizzled-5 [KO:K02375]
103178640  fzd8a; frizzled-8a isoform X1 [KO:K02375]
103184949  LOW QUALITY PROTEIN: frizzled-6 [KO:K02376]
103180513  frizzled-9 [KO:K02842]
103184280  fzd10; LOW QUALITY PROTEIN: frizzled-10 [KO:K02842]
103174935  lrp5; low-density lipoprotein receptor-related protein 5 [KO:K03068]
103179330  lrp6; low-density lipoprotein receptor-related protein 6 isoform X1 [KO:K03068]
103186420  bambia; BMP and activin membrane-bound inhibitor homolog precursor [KO:K10162]
103183822  BMP and activin membrane-bound inhibitor homolog [KO:K10162]
103181042  protein APCDD1 [KO:K25812]
103189787  casein kinase I [KO:K08960] [EC:2.7.11.1]
103181449  segment polarity protein dishevelled homolog DVL-1 [KO:K02353]
103187995  segment polarity protein dishevelled homolog DVL-3 [KO:K02353]
103174308  LOW QUALITY PROTEIN: glycogen synthase kinase binding protein [KO:K03096]
103183639  zgc:86598; casein kinase II subunit alpha [KO:K03097] [EC:2.7.11.1]
103185904  csnk2a2b; casein kinase II subunit alpha' [KO:K03097] [EC:2.7.11.1]
103188624  casein kinase II subunit alpha [KO:K03097] [EC:2.7.11.1]
103176318  nkd2b; protein naked cuticle homolog 2-like isoform X1 [KO:K03213]
103176172  nkd1; protein naked cuticle homolog 1 isoform X1 [KO:K03213]
103177732  CXXC-type zinc finger protein 4 [KO:K03344]
103191445  sentrin-specific protease 2 isoform X1 [KO:K03345] [EC:3.4.22.68]
103180204  gsk3ba; glycogen synthase kinase-3 beta isoform X1 [KO:K03083] [EC:2.7.11.26]
103183916  ctnnb1; catenin beta-1 [KO:K02105]
103188268  axin1; axin-1 isoform X1 [KO:K02157]
103175739  axin2; axin-2 isoform X1 [KO:K04385]
103181147  apc; LOW QUALITY PROTEIN: adenomatous polyposis coli protein [KO:K02085]
103182088  apc2; LOW QUALITY PROTEIN: adenomatous polyposis coli protein 2 [KO:K02085]
103186939  csnk1a1; casein kinase I isoform X1 [KO:K08957] [EC:2.7.11.1]
103183678  tcf7; transcription factor 7 isoform X1 [KO:K02620]
103186546  tcf7l2; transcription factor 7-like 2 isoform X1 [KO:K04491]
103182161  lymphoid enhancer-binding factor 1 [KO:K04492]
103185235  lzts2a; leucine zipper putative tumor suppressor 2a [KO:K26471]
103184233  ctnnbip1; beta-catenin-interacting protein 1 [KO:K04493]
103181142  mcc; colorectal mutant cancer protein isoform X1 [KO:K26734]
103181092  sirt1; NAD-dependent protein deacetylase sirtuin-1 [KO:K11411] [EC:2.3.1.286]
103177042  transcription factor Sox-17-alpha [KO:K04495]
103177277  uncharacterized protein LOC103177277 [KO:K04496] [EC:1.1.1.428]
103181470  ctbp1; C-terminal-binding protein 1 isoform X1 [KO:K04496] [EC:1.1.1.428]
103185450  LOW QUALITY PROTEIN: C-terminal-binding protein 2 [KO:K04496] [EC:1.1.1.428]
103182069  transducin-like enhancer protein 4 isoform X1 [KO:K04497]
103182103  transducin-like enhancer protein 1 isoform X1 [KO:K04497]
103191120  transducin-like enhancer protein 3 isoform X1 [KO:K04497]
103186087  transducin-like enhancer protein 1 isoform X1 [KO:K04497]
103186089  transducin-like enhancer protein 4 isoform X1 [KO:K04497]
103176257  catenin delta-2 isoform X1 [KO:K23491]
103178725  crebbpb; CREB binding protein b isoform X1 [KO:K04498] [EC:2.3.1.48]
103189241  histone acetyltransferase p300 isoform X1 [KO:K04498] [EC:2.3.1.48]
103176669  ruvbl1; ruvB-like 1 [KO:K04499] [EC:5.6.2.4]
103187334  mothers against decapentaplegic homolog 4 [KO:K04501]
103189587  smad3b; mothers against decapentaplegic homolog 3 [KO:K23605]
103178276  map3k7; mitogen-activated protein kinase kinase kinase 7 isoform X1 [KO:K04427] [EC:2.7.11.25]
103183358  nlk2; serine/threonine-protein kinase NLK [KO:K04468] [EC:2.7.11.24]
103185113  transcriptional regulator Myc-2 [KO:K04377]
103185297  jun; transcription factor AP-1 [KO:K04448]
121850328  ccnd1; G1/S-specific cyclin-D1 [KO:K04503]
103182468  G1/S-specific cyclin-D2 isoform X1 [KO:K10151]
103185578  G1/S-specific cyclin-D2 isoform X1 [KO:K10151]
121852060  G1/S-specific cyclin-D2-like [KO:K10151]
103179054  peroxisome proliferator-activated receptor delta [KO:K04504]
103178476  presenilin-1 isoform X1 [KO:K04505] [EC:3.4.23.-]
103191072  LOW QUALITY PROTEIN: presenilin-1-like [KO:K04505] [EC:3.4.23.-]
103174709  prkacba; protein kinase, cAMP-dependent, catalytic, beta a isoform X2 [KO:K04345] [EC:2.7.11.11]
103189096  cAMP-dependent protein kinase catalytic subunit alpha isoform X1 [KO:K04345] [EC:2.7.11.11]
103176072  siah1; E3 ubiquitin-protein ligase Siah1 [KO:K04506] [EC:2.3.2.27]
103182116  S-phase kinase-associated protein 1 [KO:K03094]
103183679  S-phase kinase-associated protein 1 [KO:K03094]
103175772  tbl1xr1a; F-box-like/WD repeat-containing protein TBL1XR1a [KO:K04508]
103177163  F-box-like/WD repeat-containing protein TBL1XR1 [KO:K04508]
103177316  F-box/WD repeat-containing protein 11 isoform X2 [KO:K03362]
103187003  cul1b; cullin-1b [KO:K03347]
103189242  rbx1; E3 ubiquitin-protein ligase RBX1 [KO:K03868] [EC:2.3.2.32]
103179396  gpc4; glypican-4 [KO:K08110]
103191206  ror1; inactive tyrosine-protein kinase transmembrane receptor ROR1 [KO:K05122] [EC:2.7.10.1]
103182863  ror2; LOW QUALITY PROTEIN: tyrosine-protein kinase transmembrane receptor ROR2 [KO:K05123] [EC:2.7.10.1]
103189470  ryk; tyrosine-protein kinase RYK isoform X1 [KO:K05128] [EC:2.7.10.1]
103177446  vang-like protein 1 [KO:K04510]
103179386  prickle1b; LOW QUALITY PROTEIN: prickle-like protein 1b [KO:K04511]
103179774  prickle2b; prickle-like protein 2b isoform X1 [KO:K04511]
103182475  prickle planar cell polarity protein 3 isoform X2 [KO:K04511]
103181166  invs; inversin isoform X1 [KO:K19626]
103178516  daam1a; LOW QUALITY PROTEIN: disheveled-associated activator of morphogenesis 1 [KO:K04512]
103190354  daam2; disheveled-associated activator of morphogenesis 2-like [KO:K04512]
103176633  rhoa; transforming protein RhoA [KO:K04513]
103182401  rho-related GTP-binding protein RhoA-D [KO:K04513]
103180944  rock2a; rho-associated protein kinase 2 isoform X1 [KO:K17388] [EC:2.7.11.1]
103178707  rac1a; ras-related C3 botulinum toxin substrate 1 [KO:K04392]
103191021  ras-related C3 botulinum toxin substrate 1 isoform X1 [KO:K04392]
103191023  ras-related C3 botulinum toxin substrate 1 [KO:K04392]
103175476  rac3a; ras-related C3 botulinum toxin substrate 3 [KO:K07861]
103180867  mapk10; mitogen-activated protein kinase 10 isoform X1 [KO:K04440] [EC:2.7.11.24]
103185857  mitogen-activated protein kinase 8 isoform X2 [KO:K04440] [EC:2.7.11.24]
103183732  mitogen-activated protein kinase 9 isoform X1 [KO:K04440] [EC:2.7.11.24]
103187499  LOW QUALITY PROTEIN: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2 [KO:K05858] [EC:3.1.4.11]
103187635  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 isoform X1 [KO:K05858] [EC:3.1.4.11]
103171709  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 isoform X1 [KO:K05858] [EC:3.1.4.11]
103181591  camk2g2; calcium/calmodulin-dependent protein kinase type II subunit gamma isoform X1 [KO:K04515] [EC:2.7.11.17]
103180901  calcium/calmodulin-dependent protein kinase type II subunit delta isoform X1 [KO:K04515] [EC:2.7.11.17]
103188234  calcium/calmodulin-dependent protein kinase type II subunit alpha isoform X1 [KO:K04515] [EC:2.7.11.17]
103190417  calcium/calmodulin-dependent protein kinase type II subunit beta [KO:K04515] [EC:2.7.11.17]
121852068  LOW QUALITY PROTEIN: calcium/calmodulin-dependent protein kinase type II subunit beta-like [KO:K04515] [EC:2.7.11.17]
103177620  serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform [KO:K04348] [EC:3.1.3.16]
103185841  serine/threonine-protein phosphatase 2B catalytic subunit beta isoform isoform X2 [KO:K04348] [EC:3.1.3.16]
103186967  ppp3cb; serine/threonine-protein phosphatase 2B catalytic subunit beta isoform isoform X1 [KO:K04348] [EC:3.1.3.16]
103187759  serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform [KO:K04348] [EC:3.1.3.16]
103177901  ppp3r1a; calcineurin subunit B type 1 [KO:K06268]
103175619  protein kinase C alpha type isoform X1 [KO:K02677] [EC:2.7.11.13]
103186617  prkcba; protein kinase C, beta a [KO:K19662] [EC:2.7.11.13]
103183227  nfatc1; LOW QUALITY PROTEIN: nuclear factor of activated T-cells, cytoplasmic 1 [KO:K04446]
103191018  nfatc2a; nuclear factor of activated T-cells, cytoplasmic 2 isoform X1 [KO:K17332]
103176110  nfatc3a; nuclear factor of activated T-cells, cytoplasmic 3 isoform X1 [KO:K17333]
Compound
C00076  Calcium cation
Reference
  Authors
Hatsell S, Rowlands T, Hiremath M, Cowin P.
  Title
Beta-catenin and Tcfs in mammary development and cancer.
  Journal
J Mammary Gland Biol Neoplasia 8:145-58 (2003)
DOI:10.1023/A:1025944723047
Reference
  Authors
Yang Y.
  Title
Wnts and wing: Wnt signaling in vertebrate limb development and musculoskeletal morphogenesis.
  Journal
Birth Defects Res Part C Embryo Today 69:305-17 (2003)
DOI:10.1002/bdrc.10026
Reference
  Authors
Kalderon D.
  Title
Similarities between the Hedgehog and Wnt signaling pathways.
  Journal
Trends Cell Biol 12:523-31 (2002)
DOI:10.1016/S0962-8924(02)02388-7
Reference
  Authors
Nusse R.
  Title
Wnts and Hedgehogs: lipid-modified proteins and similarities in signaling mechanisms at the cell surface.
  Journal
Development 130:5297-305 (2003)
DOI:10.1242/dev.00821
Reference
  Authors
Jope RS, Johnson GV.
  Title
The glamour and gloom of glycogen synthase kinase-3.
  Journal
Trends Biochem Sci 29:95-102 (2004)
DOI:10.1016/j.tibs.2003.12.004
Reference
  Authors
Veeman MT, Axelrod JD, Moon RT.
  Title
A second canon. Functions and mechanisms of beta-catenin-independent Wnt signaling.
  Journal
Dev Cell 5:367-77 (2003)
DOI:10.1016/S1534-5807(03)00266-1
Reference
  Authors
Sun TQ, Lu B, Feng JJ, Reinhard C, Jan YN, Fantl WJ, Williams LT.
  Title
PAR-1 is a Dishevelled-associated kinase and a positive regulator of Wnt signalling.
  Journal
Nat Cell Biol 3:628-36 (2001)
DOI:10.1038/35083016
Reference
  Authors
Saito-Diaz K, Chen TW, Wang X, Thorne CA, Wallace HA, Page-McCaw A, Lee E
  Title
The way Wnt works: Components and mechanism.
  Journal
Growth Factors 31:1-31 (2013)
DOI:10.3109/08977194.2012.752737
Reference
  Authors
Carethers JM
  Title
Intersection of transforming growth factor-beta and Wnt signaling pathways in colorectal cancer and metastasis.
  Journal
Gastroenterology 137:33-6 (2009)
DOI:10.1053/j.gastro.2009.05.011
Reference
  Authors
Lin Z, Gao C, Ning Y, He X, Wu W, Chen YG
  Title
The pseudoreceptor BMP and activin membrane-bound inhibitor positively modulates Wnt/beta-catenin signaling.
  Journal
J Biol Chem 283:33053-8 (2008)
DOI:10.1074/jbc.M804039200
Reference
  Authors
Niehrs C
  Title
The complex world of WNT receptor signalling.
  Journal
Nat Rev Mol Cell Biol 13:767-79 (2012)
DOI:10.1038/nrm3470
Reference
  Authors
Abou Ziki MD, Mani A
  Title
Wnt signaling, a novel pathway regulating blood pressure? State of the art review.
  Journal
Atherosclerosis 262:171-178 (2017)
DOI:10.1016/j.atherosclerosis.2017.05.001
Reference
  Authors
He Y, Ki H, Kim H, Kim K
  Title
delta-Catenin interacts with LEF-1 and negatively regulates its transcriptional activity.
  Journal
Cell Biol Int 39:954-61 (2015)
DOI:10.1002/cbin.10465
Reference
  Authors
Esaki N, Enomoto A, Takagishi M, Mizutani Y, Iida T, Ushida K, Shiraki Y, Mii S, Takahashi M
  Title
The Daple-CK1epsilon complex regulates Dvl2 phosphorylation and canonical Wnt signaling.
  Journal
Biochem Biophys Res Commun 532:406-413 (2020)
DOI:10.1016/j.bbrc.2020.08.066
Reference
  Authors
Yiew NKH, Chatterjee TK, Tang YL, Pellenberg R, Stansfield BK, Bagi Z, Fulton DJ, Stepp DW, Chen W, Patel V, Kamath VM, Litwin SE, Hui DY, Rudich SM, Kim HW, Weintraub NL
  Title
A novel role for the Wnt inhibitor APCDD1 in adipocyte differentiation: Implications for diet-induced obesity.
  Journal
J Biol Chem 292:6312-6324 (2017)
DOI:10.1074/jbc.M116.758078
Related
pathway
cmk04010  MAPK signaling pathway
cmk04110  Cell cycle
cmk04115  p53 signaling pathway
cmk04120  Ubiquitin mediated proteolysis
cmk04350  TGF-beta signaling pathway
cmk04510  Focal adhesion
cmk04520  Adherens junction
KO pathway
ko04310   
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