KEGG   PATHWAY: ko03230
Entry
ko03230                     Pathway                                
Name
Viral genome structure
Class
Genetic Information Processing; Information processing in viruses
Pathway map
ko03230  Viral genome structure
ko03230

Drug
D00296  Didanosine (JAN/USP/INN)
D00353  Lamivudine (JAN/USP/INN)
D00412  Zalcitabine (JAN/USP/INN)
D00413  Zidovudine (JP18/USP/INN)
D00423  Ribavirin (JP18/USP/INN)
D00427  Ritonavir (JAN/USP/INN)
D00429  Saquinavir (JAN/USP/INN)
D00435  Nevirapine (JAN/USP/INN)
D00445  Stavudine (USAN/INN)
D00777  Amantadine hydrochloride (JP18/USP)
D00891  Abacavir sulfate (JAN/USP)
D00894  Amprenavir (JAN/USAN/INN)
D00895  Delavirdine mesylate (USAN)
D00896  Efavirenz (JAN/USP/INN)
D00897  Indinavir sulfate (USP)
D00899  Nelfinavir mesylate (USAN/INN)
D00900  Oseltamivir phosphate (JAN/USP)
D00901  Rimantadine hydrochloride (USP)
D00902  Zanamivir (USP/INN)
D01055  Emivirine (USAN/INN)
D01160  Saquinavir mesylate (USP)
D01199  Emtricitabine (JAN/USAN/INN)
D01276  Atazanavir sulfate (JAN/USAN)
D01425  Lopinavir (JAN/USP/INN)
D01655  Adefovir dipivoxil (USAN)
D01937  Zanamivir hydrate (JAN)
D01982  Tenofovir disoproxil fumarate (JAN/USAN)
D01995  Inosine pranobex (JAN)
D02297  Emtricitabine and tenofovir disoproxil
D02497  Fosamprenavir (INN)
D02498  Lopinavir and ritonavir
D02499  Enfuvirtide (USAN/INN)
D02734  Abacavir succinate (USAN)
D02768  Adefovir (USAN/INN)
D02830  Alovudine (USAN/INN)
D02861  Indinavir sulfate ethanolate (JAN)
D02867  Fosamprenavir calcium hydrate (JAN)
D02890  Amdoxovir (USAN/INN)
D03001  Atevirdine mesylate (USAN)
D03253  Brecanavir (USAN)
D03371  Capravirine (USAN/INN)
D03433  Celgosivir hydrochloride (USAN)
D03501  Ciluprevir (USAN/INN)
D03506  Cinanserin hydrochloride (USAN)
D03537  Clevudine (USAN)
D03656  Darunavir (USAN/INN)
D03829  Peramivir (USAN/INN)
D03835  Fosamprenavir calcium (USAN)
D03837  Fosamprenavir sodium (USAN)
D03839  Droxinavir hydrochloride (USAN)
D03840  Palinavir (USAN/INN)
D03842  Telinavir (USAN/INN)
D03843  Tipranavir disodium (USAN)
D03981  Elvucitabine (USAN/INN)
D04008  Entecavir (USP)
D04112  Etravirine (JAN/USAN/INN)
D04757  Lobucavir (USAN/INN)
D04759  Lodenosine (USAN)
D04786  Loviride (USAN/INN)
D05538  Mozenavir (INN)
D05588  Pradefovir mesylate (USAN)
D05695  Raluridine (USAN)
D06074  Tenofovir (USAN)
D06196  Torcitabine (USAN/INN)
D06207  Trecovirsen sodium (USAN)
D06259  Tuvirumab (USAN/INN)
D06278  Valtorcitabine dihydrochloride (USAN)
D06478  Darunavir ethanolate (JAN)
D06564  Bevirimat dimeglumine (USAN)
D06580  Dexelvucitabine (USAN/INN)
D06651  Taribavirin hydrochloride (USAN)
D06675  Telbivudine (USAN/INN)
D06676  Raltegravir (INN)
D06677  Elvitegravir (JAN/USAN)
D07057  Abacavir (INN)
D07133  Raltegravir potassium (JAN/USAN)
D07441  Amantadine (INN)
D07471  Atazanavir (INN)
D07507  Zidovudine and lamivudine
D07782  Delavirdine (INN)
D07896  Entecavir (INN)
D08259  Nelfinavir (INN)
D08306  Oseltamivir (INN)
D08483  Rimantadine (INN)
D08605  Tipranavir (INN)
D08775  Abacavir sulfate and lamivudine
D08876  Boceprevir (INN/USAN)
D08951  Nesbuvir (USAN)
D09012  Telaprevir (JAN/USAN/INN)
D09028  Valopicitabine dihydrochloride (USAN)
D09410  Laninamivir (INN)
D09537  Favipiravir (JAN/USAN/INN)
D09547  Laninamivir octanoate hydrate (JAN)
D09582  Balapiravir (USAN/INN)
D09583  Balapiravir hydrochloride (USAN)
D09616  Filibuvir (USAN/INN)
D09634  Lersivirine (USAN/INN)
D09644  Narlaprevir (USAN/INN)
D09720  Rilpivirine (JAN/USAN/INN)
D09884  Danoprevir (USAN/INN)
D09885  Danoprevir sodium (USAN)
D09906  Fosdevirine (USAN/INN)
D09958  Rilpivirine hydrochloride (JAN/USAN)
D09971  Tegobuvir (USAN/INN)
D09987  Vaniprevir (JAN/USAN/INN)
D10065  Daclatasvir (USAN)
D10066  Dolutegravir (USAN)
D10081  Simeprevir (JAN/USAN)
D10093  Asunaprevir (JAN/USAN)
D10105  Daclatasvir dihydrochloride (USAN)
D10113  Dolutegravir sodium (JAN/USAN)
D10153  Radavirsen (USAN)
D10165  Setrobuvir (USAN)
D10166  Sovaprevir (USAN)
D10366  Sofosbuvir (JAN/USAN/INN)
D10393  Deldeprevir (USAN/INN)
D10394  Deldeprevir sodium (USAN)
D10408  Vedroprevir (USAN/INN)
D10425  Lomibuvir (USAN/INN)
D10428  Tenofovir alafenamide (USAN/INN)
D10442  Ledipasvir (USAN/INN)
D10462  Faldaprevir sodium (JAN/USAN)
D10469  Simeprevir sodium (JAN)
D10477  Mericitabine (USAN/INN)
D10548  Cabotegravir (JAN/USAN/INN)
D10549  Cabotegravir sodium (JAN/USAN)
D10550  Censavudine (USAN)
D10553  Dasabuvir (USAN/INN)
D10554  Deleobuvir (USAN/INN)
D10571  Rilpivirine hydrochloride, tenofovir disoproxil fumarate and emtricitabine
D10576  Ombitasvir (USAN/INN)
D10578  Ledipasvir and sofosbuvir
D10580  Paritaprevir (USAN/INN)
D10581  Dasabuvir sodium hydrate
D10582  Dasabuvir, ombitasvir, paritaprevir and ritonavir
D10597  Paritaprevir hydrate (JAN)
D10598  Ombitasvir hydrate (JAN)
D10599  Ledipasvir acetonate (JAN)
D10600  Dolutegravir, abacavir and lamivudine
D10605  Tenofovir alafenamide fumarate (JAN/USAN)
D10610  Beclabuvir (USAN/INN)
D10611  Beclabuvir hydrochloride (JAN/USAN)
D10622  Deleobuvir sodium (JAN/USAN)
D10624  Doravirine (JAN/USAN/INN)
D10625  Elbasvir (JAN/USAN/INN)
D10639  Grazoprevir (USAN)
D10665  Samatasvir (USAN/INN)
D10707  Fostemsavir (USAN)
D10708  Fostemsavir tromethamine (USAN)
D10734  Temsavir (USAN/INN)
D10745  Ombitasvir, paritaprevir and ritonavir
D10753  Atazanavir and cobicistat
D10754  Lamivudine and raltegravir
D10755  Elvitegravir, cobicistat, emtricitabine and tenofovir alafenamide
D10756  Elvitegravir, cobicistat, emtricitabine and tenofovir disoproxil
D10778  Elbasvir and grazoprevir
D10806  Velpatasvir (JAN/USAN/INN)
D10814  Glecaprevir (USAN/INN)
D10815  Glecaprevir hydrate (JAN)
D10816  Pibrentasvir (JAN/USAN/INN)
D10832  Darunavir and cobicistat
D10834  Tenofovir disoproxil phosphate
D10835  Emtricitabine and tenofovir alafenamide
D10838  Abacavir, lamivudine and zidovudine
D10851  Efavirenz, emtricitabine and tenofovir disoproxil
D10882  Daclatasvir, asunaprevir and beclabuvir
D10894  Valtorcitabine (INN)
D10899  Voxilaprevir (USAN/INN)
D10900  Sofosbuvir, velpatasvir and voxilaprevir
D10909  Bictegravir (USAN/INN)
D10910  Bictegravir sodium (JAN/USAN)
D10919  Cosfroviximab (USAN/INN)
D10948  Larcaviximab (USAN/INN)
D10974  Porgaviximab (USAN/INN)
D10996  Uprifosbuvir (USAN/INN)
D11021  Baloxavir marboxil (JAN/USAN/INN)
D11039  Bictegravir, emtricitabine and tenofovir alafenamide
D11246  Dapivirine (USAN/INN)
D11278  Baloxavir (USAN)
D11282  Dolutegravir sodium and rilpivirine hydrochloride
D11287  Pimodivir (USAN/INN)
D11364  Adafosbuvir (USAN)
D11367  Pimodivir hydrochloride (USAN)
D11381  Gedivumab (USAN)
D11382  Darunavir, cobicistat, emtricitabine and tenofovir alafenamide
D11391  Tenofovir disoproxil maleate
D11392  Efavirenz, lamivudine and tenofovir disoproxil fumarate
D11395  Lamivudine and tenofovir disoproxil
D11396  Doravirine, lamivudine and tenofovir disoproxil
D11432  Islatravir (USAN)
D11450  Maftivimab (USAN)
D11468  Atoltivimab (USAN)
D11472  Remdesivir (JAN/USAN)
D11521  Lamivudine, nevirapine and zidovudine
D11522  Dolutegravir and lamivudine
D11565  Grazoprevir (USAN/INN)
D11721  Rovafovir etalafenamide (USAN)
D11722  Rovafovir etalafenamide citrate (USAN)
D11875  Ansuvimab (USAN)
D11914  Islatravir hydrate (JAN/USAN)
D11921  Odesivimab (USAN)
D11922  Atoltivimab, maftivimab and odesivimab
D11936  Bamlanivimab (USAN)
D11938  Casirivimab (USAN)
D11939  Imdevimab (USAN)
D11943  Molnupiravir (JAN/USAN)
D11944  Etesevimab (USAN)
D11966  Cabotegravir and rilpivirine
D11971  Tozinameran (JAN)
D11993  Tixagevimab (USAN)
D11994  Cilgavimab (USAN)
D12014  Sotrovimab (USAN/INN)
D12054  Vebicorvir (USAN/INN)
D12114  Elasomeran (JAN)
D12115  COVID-19 vaccine (ChAdOx1-S [recombinant])
D12126  Bersacapavir (USAN/INN)
D12129  COVID-19 vaccine (Ad26.COV2-S [recombinant])
D12142  Casirivimab and imdevimab
D12161  Lenacapavir (USAN/INN)
D12162  Lenacapavir sodium (JAN/USAN)
D12172  Lufotrelvir (USAN)
D12174  Bebtelovimab (USAN)
D12199  Plutavimab (USAN)
D12241  Regdanvimab (INN)
D12244  Nirmatrelvir (JAN/USAN)
D12247  Coblopasvir (INN)
D12254  Amubarvimab (USAN)
D12255  Bemnifosbuvir (USAN)
D12260  Bemnifosbuvir sulfate (USAN)
D12262  Tixagevimab and cilgavimab
D12267  Romlusevimab (USAN)
D12288  Ulonivirine (USAN)
D12302  Beludavimab (USAN)
D12322  Crexavibart (USAN/INN)
D12325  Ogalvibart (USAN/INN)
D12336  SARS-CoV-2 Spike glycoprotein vaccine antigen nvx-cov2373
D12353  Ensitrelvir fumarate (USAN)
D12389  Adintrevimab (USAN/INN)
D12406  Ensovibep (INN)
D12470  Gorivitug (USAN/INN)
D12503  Linvencorvir (USAN/INN)
D12522  Pomotrelvir (USAN/INN)
D12523  Fipravirimat (USAN/INN)
D12535  Fipravirimat mesylate (USAN)
D12610  Ufrenmeran (JAN/INN)
D12619  Ensitrelvir (USAN/INN)
D12626  Zinlirvimab (USAN/INN)
D12630  Teropavimab (USAN/INN)
D12631  Tobevibart (USAN/INN)
D12637  Darunavir hydrate
D12726  Ibuzatrelvir (USAN)
D12738  Zapomeran (JAN/INN)
D12744  Ravidasvir (USAN/INN)
D12745  Ravidasvir hydrochloride (USAN)
D12752  Darunavir propylene glycolate
D12776  Obeldesivir (USAN/INN)
D12777  Olgotrelvir (USAN)
D12778  Olgotrelvir sodium (USAN)
D12876  Pemivibart (INN)
D12894  Sonavibart (USAN)
Orthology
K22951  HIV Gag or Gag-Pol polyprotein
K25306  HIV capsid protein
K22599  HIV protease [EC:3.4.23.16 3.4.23.47]
K24802  HIV-1 reverse transcriptase / ribonuclease H [EC:2.7.7.49 2.7.7.7 3.1.26.13]
K24803  HIV-1 integrase
K22892  HIV virion infectivity factor
K22202  HIV virus protein R
K19258  HIV protein Tat
K22890  HIV-1 protein Vpu
K19287  HIV envelope glycoprotein gp160
K24266  HIV envelope glycoprotein gp120
K24801  HIV transmembrane fusion protein gp41
K22891  HIV protein Nef
K23017  Deltaretrovirus gag polyprotein
K23454  Deltaretrovirus gag-pro-pol polyprotein
K25051  HTLV-1 matrix protein
K25052  HTLV-1 capsid protein
K25053  HTLV-1 nucleocapsid protein
K25054  HTLV-1 protease [EC:3.4.23.-]
K25055  HTLV-1 reverse transcriptase / ribonuclease H [EC:2.7.7.49 2.7.7.7 3.1.26.4]
K25056  HTLV-1 integrase
K19259  Deltaretrovirus envelope glycoprotein gp62
K24862  HTLV envelope surface glycoprotein gp46
K24863  HTLV envelope transmembrane protein gp21
K23018  HTLV-1 rex polyprotein
K21857  Deltaretrovirus protein Tax-1
K23069  HTLV-1 accessory protein p12I
K23070  HTLV-1 accessory protein p13
K23068  HTLV-1 accessory protein p30II
K23071  HTLV-1 basic zipper factor
K23129  Orthohepadnavirus capsid protein
K21037  Hepadnaviridae DNA polymerase / reverse transcriptase / ribonuclease H [EC:2.7.7.7 2.7.7.49 3.1.26.4]
K23128  Orthohepadnavirus large envelope protein
K21854  Orthohepadnavirus protein X
K19358  Hepatitis C virus polyprotein
K22271  Hepatitis C virus core protein
K24861  Hepatitis C virus envelope glycoprotein E1
K22272  Hepatitis C virus envelope glycoprotein E2
K22497  Hepatitis C virus non-structural protein 2 [EC:3.4.22.-]
K22273  Hepatitis C virus serine protease / helicase NS3 [EC:3.4.21.98 3.6.1.15 5.6.2.6]
K22274  Hepatitis C virus non-structural protein 4A
K22498  Hepatitis C virus non-structural protein 4B
K22275  Hepatitis C virus non-structural protein 5A
K22472  Hepatitis C virus RNA-dependent RNA polymerase [EC:2.7.7.48]
K25281  Enterovirus genome polyprotein
K25928  Enterovirus capsid protein VP0
K25127  Enterovirus C capsid protein VP1
K25293  Enterovirus protease 2A [EC:3.4.22.29]
K25294  Enterovirus protein 2B
K01516  Enterovirus protein 2C [EC:3.6.1.15]
K25295  Enterovirus protein 3AB
K25296  Enterovirus protein 3A
K25297  Enterovirus viral protein genome-linked
K25298  Enterovirus protein 3CD
K25299  Enterovirus protease 3C [EC:3.4.22.28]
K00985  Enterovirus RNA-directed RNA polymerase [EC:2.7.7.48]
K25300  Alphavirus polyprotein P1234
K19288  Alphavirus structral polyprotein
K25804  Alphavirus spike glycoprotein E1
K25126  Alphavirus spike glycoprotein E2
K24149  Coronaviridae replicase polyprotein 1ab
K25011  SARS coronavirus host translation inhibitor nsp1
K25012  SARS coronavirus non-structural protein 2
K25013  SARS coronavirus non-structural protein 3 [EC:3.4.19.12]
K25014  SARS coronavirus non-structural protein 4
K25015  SARS coronavirus 3C-like proteinase [EC:3.4.22.69]
K25016  SARS coronavirus non-structural protein 6
K25017  SARS coronavirus non-structural protein 7
K25018  SARS coronavirus non-structural protein 8
K25019  SARS coronavirus non-structural protein 9
K25020  SARS coronavirus non-structural protein 10
K25021  Coronaviridae RNA-directed RNA polymerase [EC:2.7.7.48]
K25022  SARS coronavirus helicase [EC:5.6.2.5]
K25023  SARS coronavirus proofreading exoribonuclease [EC:3.1.13.-]
K25024  SARS coronavirus uridylate-specific endoribonuclease
K25025  SARS coronavirus 2'-O-methyltransferase [EC:2.1.1.-]
K24152  SARS coronavirus spike glycoprotein
K25001  SARS coronavirus spike protein S1
K25002  SARS coronavirus spike protein S2
K24151  SARS coronavirus envelope small membrane protein
K24150  SARS coronavirus membrane protein
K24106  SARS coronavirus nucleocapsid protein
K24579  SARS coronavirus accessory protein 3a
K24580  SARS coronavirus accessory protein 6
K24581  SARS coronavirus accessory protein 7a
K24582  SARS coronavirus accessory protein 7b
K24583  SARS coronavirus accessory protein 8
K24584  SARS coronavirus accessory protein 10
K24324  MERS coronavirus spike glycoprotein
K25335  Ebolavirus nucleoprotein
K25334  Ebolavirus polymerase cofactor VP35
K24534  Ebolavirus envelope glycoprotein
K25333  Ebolavirus RNA-directed RNA polymerase L [EC:2.7.7.48 2.7.7.88 3.6.1.- 2.1.1.-]
K19380  Morbillivirus nucleoprotein
K19377  Morbillivirus phosphoprotein
K19381  Morbillivirus matrix protein
K19379  Morbillivirus fusion glycoprotein F0
K19378  Morbillivirus hemagglutinin glycoprotein
K19376  Morbillivirus RNA-directed RNA polymerase L [EC:2.7.7.48 3.6.1.- 2.7.7.88 2.1.1.375]
K19388  Influenza virus polymerase basic protein 2
K19389  Influenza virus RNA-directed RNA polymerase catalytic subunit [EC:2.7.7.48]
K19397  Influenza A virus protein PB1-F2
K19390  Influenza virus polymerase acidic protein
K25146  Influenza A virus protein PA-X
K19251  Influenza A virus hemagglutinin
K19391  Influenza virus nucleoprotein
K19392  Influenza A/B virus neuraminidase [EC:3.2.1.18]
K19393  Influenza A/B virus matrix protein 1
K19394  Influenza A virus matrix protein 2
K19396  Influenza A virus non-structural protein 1
K19395  Influenza A virus nuclear export protein
K25160  Influenza A virus hemagglutinin HA1 chain
K25161  Influenza A virus hemagglutinin HA2 chain
K24320  Old World arenavirus glycoprotein
K25125  Old World arenavirus glycoprotein GP1
K25319  Old World arenavirus glycoprotein GP2
K25301  Mammarenavirus nucleoprotein [EC:3.1.13.-]
K25302  Mammarenavirus RING finger protein Z
K25303  Mammarenavirus RNA-directed RNA polymerase L [EC:2.7.7.48 3.1.-.-]
Reference
  Authors
de Oliveira T, Engelbrecht S, Janse van Rensburg E, Gordon M, Bishop K, zur Megede J, Barnett SW, Cassol S
  Title
Variability at human immunodeficiency virus type 1 subtype C protease cleavage sites: an indication of viral fitness?
  Journal
J Virol 77:9422-30 (2003)
DOI:10.1128/jvi.77.17.9422-9430.2003
Reference
  Authors
Hayes AM, Qian S, Yu L, Boris-Lawrie K
  Title
Tat RNA silencing suppressor activity contributes to perturbation of lymphocyte miRNA by HIV-1.
  Journal
Retrovirology 8:36 (2011)
DOI:10.1186/1742-4690-8-36
Reference
  Authors
Zhang LL, Wei JY, Wang L, Huang SL, Chen JL
  Title
Human T-cell lymphotropic virus type 1 and its oncogenesis.
  Journal
Acta Pharmacol Sin 38:1093-1103 (2017)
DOI:10.1038/aps.2017.17
Reference
  Authors
Al-Sadeq DW, Taleb SA, Zaied RE, Fahad SM, Smatti MK, Rizeq BR, Al Thani AA, Yassine HM, Nasrallah GK
  Title
Hepatitis B Virus Molecular Epidemiology, Host-Virus Interaction, Coinfection, and Laboratory Diagnosis in the MENA Region: An Update.
  Journal
Pathogens 8:E63 (2019)
DOI:10.3390/pathogens8020063
Reference
  Authors
Tellinghuisen TL, Evans MJ, von Hahn T, You S, Rice CM
  Title
Studying hepatitis C virus: making the best of a bad virus.
  Journal
J Virol 81:8853-67 (2007)
DOI:10.1128/JVI.00753-07
Reference
  Authors
Alanagreh L, Alzoughool F, Atoum M
  Title
The Human Coronavirus Disease COVID-19: Its Origin, Characteristics, and Insights into Potential Drugs and Its Mechanisms.
  Journal
Pathogens 9:E331 (2020)
DOI:10.3390/pathogens9050331
Reference
  Authors
Polycarpou A, Howard M, Farrar CA, Greenlaw R, Fanelli G, Wallis R, Klavinskis LS, Sacks S
  Title
Rationale for targeting complement in COVID-19.
  Journal
EMBO Mol Med 12:e12642 (2020)
DOI:10.15252/emmm.202012642
Reference
  Authors
Krishnamoorthy S, Swain B, Verma RS, Gunthe SS
  Title
SARS-CoV, MERS-CoV, and 2019-nCoV viruses: an overview of origin, evolution, and genetic variations.
  Journal
Virusdisease 1-13 (2020)
DOI:10.1007/s13337-020-00632-9
Reference
  Authors
Singh RK, Dhama K, Malik YS, Ramakrishnan MA, Karthik K, Khandia R, Tiwari R, Munjal A, Saminathan M, Sachan S, Desingu PA, Kattoor JJ, Iqbal HM, Joshi SK
  Title
Ebola virus - epidemiology, diagnosis, and control: threat to humans, lessons learnt, and preparedness plans - an update on its 40 year's journey.
  Journal
Vet Q 37:98-135 (2017)
DOI:10.1080/01652176.2017.1309474
Reference
  Authors
Bankamp B, Takeda M, Zhang Y, Xu W, Rota PA
  Title
Genetic characterization of measles vaccine strains.
  Journal
J Infect Dis 204 Suppl 1:S533-48 (2011)
DOI:10.1093/infdis/jir097
LinkDB

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