Entry
Name
Rap1 signaling pathway - Manis javanica (Malayan pangolin)
Description
Rap1 is a small GTPase that controls diverse processes, such as cell adhesion, cell-cell junction formation and cell polarity. Like all G proteins, Rap1 cycles between an inactive GDP-bound and an active GTP-bound conformation. A variety of extracellular signals control this cycle through the regulation of several unique guanine nucleotide exchange factors (GEFs) and GTPase activating proteins (GAPs). Rap1 plays a dominant role in the control of cell-cell and cell-matrix interactions by regulating the function of integrins and other adhesion molecules in various cell types. Rap1 also regulates MAP kinase (MAPK) activity in a manner highly dependent on the context of cell types.
Class
Environmental Information Processing; Signal transduction
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Manis javanica (Malayan pangolin) [GN:
mjv ]
Gene
108403513 RAPGEF5; rap guanine nucleotide exchange factor 5 isoform X1 [KO:K08019 ]
108388298 GRIN1; glutamate receptor ionotropic, NMDA 1 isoform X1 [KO:K05208 ]
108386142 CALML6; LOW QUALITY PROTEIN: calmodulin-like protein 6 [KO:K02183 ]
108406177 guanine nucleotide-binding protein G(s) subunit alpha isoform X1 [KO:K04632 ]
118970338 guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas-like [KO:K04632 ]
108392459 RAPGEF3; rap guanine nucleotide exchange factor 3 isoform X1 [KO:K08014 ]
108395539 RAPGEF4; rap guanine nucleotide exchange factor 4 isoform X1 [KO:K04351 ]
108397041 guanine nucleotide-binding protein G(q) subunit alpha [KO:K04634 ]
108394257 PLCB1; 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 isoform X3 [KO:K05858 ] [EC:3.1.4.11 ]
108394259 PLCB4; 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 isoform X1 [KO:K05858 ] [EC:3.1.4.11 ]
108401653 PLCB2; 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2 isoform X1 [KO:K05858 ] [EC:3.1.4.11 ]
108405921 FGF8; LOW QUALITY PROTEIN: fibroblast growth factor 8 [KO:K04358 ]
118970652 PDGFA; platelet-derived growth factor subunit A isoform X1 [KO:K04359 ]
108397360 PDGFB; platelet-derived growth factor subunit B isoform X4 [KO:K17386 ]
108400987 CSF1; macrophage colony-stimulating factor 1 isoform X1 [KO:K05453 ]
108407564 VEGFB; vascular endothelial growth factor B isoform X3 [KO:K16858 ]
108391063 NGFR; tumor necrosis factor receptor superfamily member 16 isoform X1 [KO:K02583 ]
108406801 RAPGEF1; rap guanine nucleotide exchange factor 1 isoform X18 [KO:K06277 ]
108396170 BCAR1; breast cancer anti-estrogen resistance protein 1 isoform X1 [KO:K05726 ]
108392147 MAGI1; membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 [KO:K05631 ]
108392761 MAGI2; membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2 isoform X1 [KO:K05629 ]
108392059 MAGI3; membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 isoform X1 [KO:K06112 ]
108392300 RAPGEF2; rap guanine nucleotide exchange factor 2 isoform X10 [KO:K08018 ]
108398447 RAPGEF6; rap guanine nucleotide exchange factor 6 isoform X1 [KO:K08020 ]
108407644 LAT; LOW QUALITY PROTEIN: linker for activation of T-cells family member 1 [KO:K07362 ]
108407838 SKAP1; src kinase-associated phosphoprotein 1 isoform X1 [KO:K17699 ]
108402874 GNAI2; guanine nucleotide-binding protein G(i) subunit alpha-2 [KO:K04630 ]
108400984 GNAI3; guanine nucleotide-binding protein G(i) subunit alpha [KO:K04630 ]
108388509 GNAI1; guanine nucleotide-binding protein G(i) subunit alpha-1 [KO:K04630 ]
108408793 GNAO1; guanine nucleotide-binding protein G(o) subunit alpha [KO:K04534 ]
108391312 SIPA1L1; signal-induced proliferation-associated 1-like protein 1 [KO:K17701 ]
108397006 SIPA1; signal-induced proliferation-associated protein 1 isoform X1 [KO:K08013 ]
108403350 SIPA1L2; signal-induced proliferation-associated 1-like protein 2 isoform X1 [KO:K17702 ]
108391279 SIPA1L3; signal-induced proliferation-associated 1-like protein 3 [KO:K17703 ]
108388220 RALGDS; ral guanine nucleotide dissociation stimulator isoform X2 [KO:K08732 ]
108407595 RAC1; ras-related C3 botulinum toxin substrate 1 isoform X1 [KO:K04392 ]
108392664 RAC2; ras-related C3 botulinum toxin substrate 2 isoform X1 [KO:K07860 ]
108401717 amyloid beta A4 precursor protein-binding family B member 1-interacting protein [KO:K17704 ]
108405531 ARAP3; arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 isoform X1 [KO:K12490 ]
108391531 CDC42; cell division control protein 42 homolog isoform X1 [KO:K04393 ]
108388194 VAV2; guanine nucleotide exchange factor VAV2 isoform X1 [KO:K05730 ]
108387898 TIAM1; T-lymphoma invasion and metastasis-inducing protein 1 isoform X1 [KO:K05731 ]
118973716 PARD6A; partitioning defective 6 homolog alpha isoform X1 [KO:K06093 ]
108406361 RGS14; regulator of G-protein signaling 14 isoform X1 [KO:K17706 ]
108390201 RASSF5; ras association domain-containing protein 5 isoform X2 [KO:K08015 ]
108406544 PIK3CA; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform [KO:K00922 ] [EC:2.7.1.153 ]
108390365 PIK3CD; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform isoform X1 [KO:K00922 ] [EC:2.7.1.153 ]
108400388 PIK3CB; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform isoform X1 [KO:K00922 ] [EC:2.7.1.153 ]
108383561 PIK3R2; phosphatidylinositol 3-kinase regulatory subunit beta [KO:K02649 ]
108390475 PIK3R1; phosphatidylinositol 3-kinase regulatory subunit alpha isoform X2 [KO:K02649 ]
108395975 phosphatidylinositol 3-kinase regulatory subunit gamma isoform X1 [KO:K02649 ]
Compound
Reference
Authors
Kooistra MR, Dube N, Bos JL
Title
Rap1: a key regulator in cell-cell junction formation.
Journal
Reference
Authors
Bos JL, de Rooij J, Reedquist KA
Title
Rap1 signalling: adhering to new models.
Journal
Reference
Authors
Minato N, Kometani K, Hattori M
Title
Regulation of immune responses and hematopoiesis by the Rap1 signal.
Journal
Reference
Authors
Bos JL
Title
Linking Rap to cell adhesion.
Journal
Reference
Authors
Caron E
Title
Cellular functions of the Rap1 GTP-binding protein: a pattern emerges.
Journal
Reference
Authors
Zwartkruis FJ, Bos JL
Title
Ras and Rap1: two highly related small GTPases with distinct function.
Journal
Reference
Authors
Hattori M, Minato N
Title
Rap1 GTPase: functions, regulation, and malignancy.
Journal
Reference
Authors
Pannekoek WJ, Kooistra MR, Zwartkruis FJ, Bos JL
Title
Cell-cell junction formation: the role of Rap1 and Rap1 guanine nucleotide exchange factors.
Journal
Reference
Authors
Boettner B, Van Aelst L
Title
Control of cell adhesion dynamics by Rap1 signaling.
Journal
Reference
Authors
Xia Z, Storm DR.
Title
The role of calmodulin as a signal integrator for synaptic plasticity.
Journal
Reference
Authors
Mor A, Dustin ML, Philips MR
Title
Small GTPases and LFA-1 reciprocally modulate adhesion and signaling.
Journal
Reference
Authors
Burbach BJ, Medeiros RB, Mueller KL, Shimizu Y
Title
T-cell receptor signaling to integrins.
Journal
Reference
Authors
Stork PJ
Title
Does Rap1 deserve a bad Rap?
Journal
Reference
Authors
Banihashemi B, Albert PR
Title
Dopamine-D2S receptor inhibition of calcium influx, adenylyl cyclase, and mitogen-activated protein kinase in pituitary cells: distinct Galpha and Gbetagamma requirements.
Journal
Reference
Authors
Banno A, Ginsberg MH
Title
Integrin activation.
Journal
Reference
Authors
Doebele RC, Schulze-Hoepfner FT, Hong J, Chlenski A, Zeitlin BD, Goel K, Gomes S, Liu Y, Abe MK, Nor JE, Lingen MW, Rosner MR
Title
A novel interplay between Epac/Rap1 and mitogen-activated protein kinase kinase 5/extracellular signal-regulated kinase 5 (MEK5/ERK5) regulates thrombospondin to control angiogenesis.
Journal
Reference
Authors
Breckler M, Berthouze M, Laurent AC, Crozatier B, Morel E, Lezoualc'h F
Title
Rap-linked cAMP signaling Epac proteins: compartmentation, functioning and disease implications.
Journal
Related pathway
mjv04660 T cell receptor signaling pathway
mjv04810 Regulation of actin cytoskeleton
KO pathway
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