09100 Metabolism
09120 Genetic Information Processing
09121 Transcription
09122 Translation
09123 Folding, sorting and degradation
09124 Replication and repair
03030 DNA replication [PATH:nsr03030]
03410 Base excision repair [PATH:nsr03410]
03420 Nucleotide excision repair [PATH:nsr03420]
03430 Mismatch repair [PATH:nsr03430]
03440 Homologous recombination [PATH:nsr03440]
03450 Non-homologous end-joining [PATH:nsr03450]
NS506_04267 Non-like proteinous end joining protein Ku NS506_05464 DNA ligase (ATP) NS506_07750 DNA ligase (ATP) NS506_02695 ligD; DNA ligase (ATP)
K10979 ku; DNA end-binding protein Ku K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
03460 Fanconi anemia pathway
09126 Chromosome
09125 Information processing in viruses
09130 Environmental Information Processing
09140 Cellular Processes
09150 Organismal Systems
09160 Human Diseases
09180 Brite Hierarchies
09181 Protein families: metabolism
09182 Protein families: genetic information processing
03000 Transcription factors [BR:nsr03000]
03021 Transcription machinery [BR:nsr03021]
03019 Messenger RNA biogenesis [BR:nsr03019]
03041 Spliceosome
03011 Ribosome [BR:nsr03011]
03009 Ribosome biogenesis [BR:nsr03009]
03016 Transfer RNA biogenesis [BR:nsr03016]
03012 Translation factors [BR:nsr03012]
03110 Chaperones and folding catalysts [BR:nsr03110]
04131 Membrane trafficking [BR:nsr04131]
04121 Ubiquitin system [BR:nsr04121]
03051 Proteasome [BR:nsr03051]
03032 DNA replication proteins [BR:nsr03032]
03036 Chromosome and associated proteins [BR:nsr03036]
03400 DNA repair and recombination proteins [BR:nsr03400]
NS506_03997 Methylated-DNA--[protein]-cysteine S-methyltransferase NS506_01851 Methylated-DNA--[protein]-cysteine S-methyltransferase NS506_01147 mgmT; Methylated-DNA--[protein]-cysteine S-methyltransferase NS506_06545 Uracil-DNA glycosylase NS506_05688 DNA-3-methyladenine glycosylase II NS506_01221 mutY; A/G-specific adenine glycosylase NS506_00393 DNA-(apurinic or apyrimidinic site) lyase NS506_07800 DNA helicase NS506_03971 8-oxo-dGTP diphosphatase NS506_00600 8-oxo-dGTP diphosphatase NS506_01169 8-oxo-dGTP diphosphatase NS506_04584 8-oxo-dGTP diphosphatase NS506_01465 hypothetical protein NS506_03463 8-oxo-dGTP diphosphatase NS506_04089 8-oxo-dGTP diphosphatase NS506_04577 hypothetical protein NS506_04897 8-oxo-dGTP diphosphatase NS506_05871 dUTP diphosphatase NS506_04656 G/U mismatch-specific DNA glycosylase NS506_01591 uncharacterized protein NS506_01852 DNA-3-methyladenine glycosylase II NS506_01938 DNA-3-methyladenine glycosylase I NS506_01477 mutM; DNA-formamidopyrimidine glycosylase NS506_06501 DNA-formamidopyrimidine glycosylase NS506_07314 Endonuclease 8 NS506_06926 Endonuclease 8 NS506_00303 xthA; Exodeoxyribonuclease III NS506_07378 Exodeoxyribonuclease III NS506_02035 Deoxyribonuclease IV NS506_06381 Deoxyribonuclease V NS506_06637 DNA ligase (NAD(+)) NS506_02278 ligA; DNA ligase (NAD(+)) NS506_03569 dpo1; DNA-directed DNA polymerase NS506_03607 UvrABC system protein NS506_03597 UvrABC system protein NS506_04150 UvrABC system protein NS506_01493 uvrD; DNA helicase NS506_02181 DNA helicase NS506_02189 DNA helicase NS506_02552 DNA helicase NS506_00040 rpoB; DNA-directed RNA polymerase NS506_00039 rpoC; DNA-directed RNA polymerase NS506_07500 rpoA; DNA-directed RNA polymerase NS506_04117 rpoZ; DNA-directed RNA polymerase NS506_01669 Transcription-repair-coupling factor NS506_01837 xseA; Exodeoxyribonuclease VII NS506_01838 xseB; Exodeoxyribonuclease VII NS506_03420 dnaE; DNA-directed DNA polymerase NS506_00632 dnaN; DNA-directed DNA polymerase NS506_06750 holA; DNA-directed DNA polymerase NS506_00367 holB; DNA-directed DNA polymerase NS506_03243 dnaQ; DNA-directed DNA polymerase NS506_03315 DNA-directed DNA polymerase NS506_00917 dnaX; DNA-directed DNA polymerase NS506_03023 Single-stranded DNA-binding protein NS506_00498 Single-stranded DNA-binding protein NS506_06955 Single-stranded DNA-binding protein NS506_07685 Single-stranded DNA-binding protein NS506_02608 Single-stranded DNA-binding protein NS506_02621 NaeI very short patch repair endonuclease NS506_00861 NaeI very short patch repair endonuclease NS506_06587 NaeI very short patch repair endonuclease NS506_05194 recB; Exodeoxyribonuclease V NS506_05195 recC; Exodeoxyribonuclease V NS506_05193 recD; Exodeoxyribonuclease V NS506_06105 Protein RecA NS506_03915 ruvA; DNA helicase NS506_03916 ruvB; DNA helicase NS506_03914 ruvC; Crossover junction endodeoxyribonuclease NS506_04120 priA; putative primosomal protein N' NS506_01849 Nuclease SbcCD subunit NS506_01848 Nuclease SbcCD subunit NS506_01218 DNA repair protein RadA like protein NS506_00633 DNA replication and repair protein RecF NS506_06540 recG; DNA helicase NS506_02882 DNA repair protein RecO NS506_00934 Recombination protein RecR NS506_05672 DNA repair protein RecN NS506_07021 Protein anoxia up-regulated NS506_04267 Non-like proteinous end joining protein Ku NS506_05464 DNA ligase (ATP) NS506_07750 DNA ligase (ATP) NS506_02695 ligD; DNA ligase (ATP) NS506_00636 gyrA; DNA topoisomerase (ATP-hydrolyzing) NS506_00635 gyrB; DNA topoisomerase (ATP-hydrolyzing) NS506_00369 topA; DNA topoisomerase NS506_06553 DNA-binding protein HU-alpha NS506_02543 recQ; DNA helicase NS506_06849 DNA helicase NS506_03375 DNA-directed DNA polymerase NS506_04461 DNA-directed DNA polymerase NS506_00555 dpo4; DNA-directed DNA polymerase NS506_04258 Repressor LexA NS506_06019 Repressor LexA NS506_07418 hypothetical protein NS506_07406 DNA-directed DNA polymerase NS506_06103 Regulatory protein RecX NS506_07164 dinG; DNA helicase NS506_07313 putative ATP-dependent helicase lhr NS506_06552 8-oxo-dGTP diphosphatase NS506_05665 ADP-ribose diphosphatase NS506_06712 nrdA; Ribonucleoside-diphosphate reductase NS506_06691 nrdB; Ribonucleoside-diphosphate reductase NS506_06289 Bifunctional oligoribonuclease and PAP phosphatase NrnA
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K01520 dut; dUTP diphosphatase [EC:3.6.1.23] K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] K02335 polA; DNA polymerase I [EC:2.7.7.7] K03701 uvrA; excinuclease ABC subunit A K03702 uvrB; excinuclease ABC subunit B K03703 uvrC; excinuclease ABC subunit C K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] K03111 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] K03553 recA; recombination protein RecA K03550 ruvA; holliday junction DNA helicase RuvA K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] K03546 sbcC; DNA repair protein SbcC/Rad50 K03547 sbcD; DNA repair protein SbcD/Mre11 K04485 radA; DNA repair protein RadA/Sms K03629 recF; DNA replication and repair protein RecF K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] K03584 recO; DNA repair protein RecO (recombination protein O) K06187 recR; recombination protein RecR K03631 recN; DNA repair protein RecN (Recombination protein N) K06915 herA; DNA double-strand break repair helicase HerA and related ATPase K10979 ku; DNA end-binding protein Ku K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] K03168 topA; DNA topoisomerase I [EC:5.6.2.1] K03530 hupB; DNA-binding protein HU-beta K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] K02346 dinB; DNA polymerase IV [EC:2.7.7.7] K02346 dinB; DNA polymerase IV [EC:2.7.7.7] K02346 dinB; DNA polymerase IV [EC:2.7.7.7] K01356 lexA; repressor LexA [EC:3.4.21.88] K01356 lexA; repressor LexA [EC:3.4.21.88] K14161 imuB; protein ImuB K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] K03565 recX; regulatory protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69] K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
03029 Mitochondrial biogenesis [BR:nsr03029]
09183 Protein families: signaling and cellular processes
09185 Viral protein families
09184 RNA family
09190 Not Included in Pathway or Brite
KEGG Orthology (KO) - Nocardia seriolae KEGG Orthology (KO) - Nocardia seriolae