GFIT result for
amyc
|
GFIT result for
amyc
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| amyc:CU254_01120 (232 a.a.) |
-- |
K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > arhd:VSH64_39990(?) | 235 | 84.7 | 1247 | 0 | -- | - | |||
| > amd:AMED_0475(230) | 232 | 81.5 | 1210 | 51 | <> | K03088 | rpoE | rpoE; RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > amm:AMES_0474(230) | 232 | 81.5 | 1210 | 51 | <> | K03088 | rpoE | rpoE; RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > amn:RAM_02440(230) | 232 | 81.5 | 1210 | 51 | -> | K03088 | rpoE | RNA polymerase sigma-70 factor, ECF subfamily protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > amz:B737_0475(230) | 232 | 81.5 | 1210 | 51 | <> | K03088 | rpoE | rpoE; RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aprt:MUY14_34215(230) | 232 | 81.5 | 1208 | 50 | <> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aoi:AORI_0478(232) | 235 | 81.3 | 1177 | 37 | <> | K03088 | rpoE | rpoE; RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aroo:NQK81_20425(232) | 235 | 81.3 | 1177 | 39 | <> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aja:AJAP_37250(235) | 239 | 80.3 | 1157 | 36 | <> | K03088 | rpoE | RNA polymerase sigma-W factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > amyb:BKN51_36565(236) | 239 | 79.1 | 1148 | 37 | <> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aori:SD37_38850(243) | 246 | 76.0 | 1133 | 33 | <> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aab:A4R43_32865(226) | 233 | 71.2 | 1017 | 26 | <> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > amyy:YIM_45355(226) | 218 | 74.3 | 1014 | 38 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pmad:BAY61_01965(213) | 211 | 71.1 | 990 | 15 | <> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aacd:LWP59_02100(196) | 190 | 73.7 | 951 | 26 | <> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > alo:CRK60207(203) | 207 | 72.9 | 950 | 33 | -> | K03088 | rpoE | putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > actu:Actkin_06078(213) | 217 | 70.5 | 943 | 31 | <> | K03088 | rpoE | sigM_2; RNA polymerase sigma factor SigM; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sacc:EYD13_01630(213) | 214 | 70.1 | 939 | 10 | -> | K03088 | rpoE | sigM1; RNA polymerase sigma factor SigM; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kphy:AOZ06_50515(208) | 211 | 70.1 | 929 | 43 | -> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > athm:L1857_04835(215) | 197 | 72.1 | 921 | 22 | <> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > svi:Svir_02810(223) | 202 | 71.8 | 917 | 10 | <> | K03088 | rpoE | RNA polymerase sigma factor, sigma-70 family; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > amq:AMETH_0444(215) | 191 | 73.3 | 907 | 27 | <> | K03088 | rpoE | rpoE; RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > cros:N8J89_39205(206) | 208 | 70.7 | 907 | 31 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kal:KALB_8357(199) | 205 | 70.2 | 893 | 28 | <> | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ssyi:EKG83_44655(214) | 230 | 63.9 | 884 | 41 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kut:JJ691_82570(200) | 203 | 70.4 | 874 | 38 | <> | K03088 | rpoE | rpoE_28; ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ami:Amir_6736(217) | 191 | 72.3 | 866 | 23 | <> | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > apre:CNX65_33200(217) | 191 | 72.8 | 866 | 26 | <> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ume:RM788_23035(?) | 215 | 65.1 | 866 | 0 | -- | - | |||
| > sesp:BN6_80910(214) | 188 | 71.8 | 865 | 32 | <> | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pbro:HOP40_11225(221) | 212 | 66.0 | 864 | 23 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ppel:H6H00_11285(238) | 227 | 63.0 | 862 | 23 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > paut:Pdca_60610(329) | 209 | 66.0 | 849 | 134 | <> | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > psea:WY02_13180(212) | 209 | 66.0 | 845 | 10 | <> | K03088 | rpoE | RNA polymerase sigma70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pecq:AD017_16505(212) | 209 | 66.5 | 842 | 13 | <> | K03088 | rpoE | RNA polymerase sigma70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pseq:AD006_08675(212) | 209 | 66.5 | 842 | 13 | <> | K03088 | rpoE | RNA polymerase sigma70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > phh:AFB00_14335(240) | 209 | 65.6 | 841 | 16 | <> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pseh:XF36_00455(212) | 205 | 65.9 | 840 | 8 | <> | K03088 | rpoE | RNA polymerase sigma70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > rant:RHODO2019_01705(?) | 206 | 65.0 | 839 | 0 | -- | - | |||
| > led:BBK82_16820(205) | 192 | 67.2 | 822 | 34 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sace:GIY23_20985(206) | 211 | 60.2 | 820 | 6 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pdx:Psed_5625(202) | 211 | 58.8 | 811 | 21 | <> | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > acta:C1701_12780(190) | 190 | 66.8 | 796 | 16 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aey:CDG81_20900(247) | 205 | 61.0 | 782 | 24 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sen:SACE_6951(293) | 210 | 61.4 | 782 | 80 | -> | K03088 | rpoE | putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > blap:MVA48_18610(247) | 216 | 56.9 | 763 | 35 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > jtl:M6D93_02445(289) | 233 | 53.6 | 760 | 11 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bbrg:U6N30_25820(?) | 197 | 61.4 | 758 | 0 | -- | - | |||
| > actn:L083_7652(305) | 212 | 57.1 | 756 | 66 | <> | K03088 | rpoE | adsA; RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mmar:MODMU_4999(210) | 211 | 58.3 | 753 | 24 | <> | K03088 | rpoE | sigX; RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > actr:Asp14428_53360(307) | 212 | 56.6 | 747 | 76 | <> | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ccaz:COUCH_03770(309) | 221 | 54.3 | 745 | 74 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aser:Asera_05600(281) | 207 | 57.0 | 740 | 28 | <> | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > dmat:Dmats_03420(307) | 205 | 55.6 | 740 | 67 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > dvc:Dvina_03740(307) | 205 | 55.6 | 740 | 78 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > afs:AFR_40205(313) | 212 | 55.7 | 738 | 86 | <> | K03088 | rpoE | putative RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > daur:Daura_03330(311) | 211 | 54.5 | 736 | 79 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > mchl:PVK74_18390(323) | 222 | 54.1 | 735 | 120 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > micb:MicB006_4659(323) | 222 | 54.1 | 735 | 118 | <> | K03088 | rpoE | putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > msag:GCM10017556_19080(303) | 212 | 56.1 | 734 | 156 | <> | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ams:AMIS_75870(314) | 221 | 53.4 | 733 | 57 | <> | K03088 | rpoE | putative RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bsd:BLASA_4480(259) | 226 | 55.8 | 733 | 44 | <> | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > jcy:M6B22_13550(?) | 236 | 50.4 | 733 | 0 | -- | - | |||
| > mau:Micau_5649(323) | 222 | 54.1 | 733 | 126 | <> | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > psuu:Psuf_027560(307) | 211 | 55.0 | 733 | 125 | <> | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mtua:CSH63_29090(327) | 210 | 56.2 | 731 | 149 | -> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > dros:Drose_03215(305) | 212 | 55.2 | 730 | 77 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > asic:Q0Z83_094000(?) | 229 | 52.4 | 728 | 0 | -- | - | |||
| > dfu:Dfulv_04225(277) | 223 | 52.9 | 728 | 71 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > mhaw:RMN56_14605(?) | 209 | 55.5 | 728 | 0 | -- | - | |||
| > mtem:GCE86_22810(326) | 209 | 55.5 | 728 | 133 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > saq:Sare_0420(310) | 214 | 54.7 | 728 | 55 | <- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > actl:L3i22_101990(317) | 221 | 53.4 | 726 | 65 | <> | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aih:Aiant_37260(314) | 203 | 57.6 | 726 | 51 | -> | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aou:ACTOB_008204(?) | 203 | 57.6 | 726 | 0 | -- | - | |||
| > plab:C6361_11750(291) | 222 | 53.6 | 726 | 141 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > plat:C6W10_08860(291) | 222 | 53.6 | 726 | 140 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stp:Strop_0350(311) | 214 | 54.7 | 726 | 58 | <- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mfeu:H1D33_04145(?) | 222 | 53.6 | 725 | 0 | -- | - | |||
| > cati:CS0771_08550(308) | 212 | 54.2 | 723 | 49 | <> | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > acts:ACWT_7737(314) | 203 | 57.1 | 722 | 46 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ase:ACPL_7868(314) | 203 | 57.1 | 722 | 47 | <> | K03088 | rpoE | adsA; RNA polymerase sigma-H factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > atl:Athai_01830(281) | 207 | 55.6 | 721 | 39 | <> | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mprn:Q3V37_09750(?) | 199 | 56.8 | 720 | 0 | -- | - | |||
| > mcab:HXZ27_28245(322) | 199 | 56.8 | 719 | 237 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mcra:ID554_18470(314) | 211 | 55.0 | 719 | 56 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > plk:CIK06_26090(287) | 205 | 55.6 | 719 | 92 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ver:HUT12_28910(314) | 199 | 57.3 | 719 | 69 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > vma:VAB18032_01790(315) | 199 | 56.8 | 715 | 68 | <- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > gly:K3N28_10560(275) | 212 | 54.7 | 714 | 9 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > meno:Jiend_34730(315) | 238 | 50.4 | 712 | 96 | <- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sna:Snas_5692(266) | 201 | 56.7 | 699 | 20 | <- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pry:Prubr_31830(183) | 186 | 58.1 | 698 | 19 | <- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sdur:M4V62_19590(263) | 231 | 51.9 | 697 | 29 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stri:C7M71_017505(259) | 228 | 50.9 | 697 | 14 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > salw:CP975_20030(262) | 237 | 50.2 | 691 | 26 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sfk:KY5_4536c(272) | 239 | 50.2 | 690 | 35 | <- | K03088 | rpoE | putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > skg:KJK29_15545(?) | 233 | 51.1 | 690 | 0 | -- | - | |||
| > scoe:CP976_24770(256) | 233 | 51.1 | 689 | 30 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > shaw:CEB94_23325(256) | 233 | 51.1 | 689 | 26 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |