GFIT result for
ssyi
|
GFIT result for
ssyi
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| ssyi:EKG83_44655 (214 a.a.) |
-- |
K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > sesp:BN6_80910(214) | 214 | 88.8 | 1230 | 32 | <> | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ume:RM788_23035(?) | 217 | 81.1 | 1133 | 0 | -- | - | |||
| > ami:Amir_6736(217) | 217 | 81.1 | 1121 | 23 | <> | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > apre:CNX65_33200(217) | 217 | 81.1 | 1120 | 26 | <> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > led:BBK82_16820(205) | 215 | 76.3 | 1026 | 34 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kal:KALB_8357(199) | 186 | 82.3 | 983 | 28 | <> | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > cros:N8J89_39205(206) | 200 | 74.5 | 956 | 31 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kut:JJ691_82570(200) | 179 | 78.2 | 928 | 38 | <> | K03088 | rpoE | rpoE_28; ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kphy:AOZ06_50515(208) | 188 | 74.5 | 907 | 43 | <- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aprt:MUY14_34215(230) | 210 | 71.4 | 905 | 50 | <> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > actu:Actkin_06078(213) | 186 | 74.2 | 898 | 31 | <> | K03088 | rpoE | sigM_2; RNA polymerase sigma factor SigM; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aori:SD37_38850(243) | 203 | 70.4 | 894 | 33 | <> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aja:AJAP_37250(235) | 194 | 73.2 | 892 | 36 | <> | K03088 | rpoE | RNA polymerase sigma-W factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > alo:CRK60207(203) | 177 | 76.3 | 892 | 33 | <- | K03088 | rpoE | putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > amyb:BKN51_36565(236) | 204 | 69.6 | 890 | 37 | <> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > amd:AMED_0475(230) | 193 | 73.1 | 889 | 51 | <> | K03088 | rpoE | rpoE; RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > amm:AMES_0474(230) | 193 | 73.1 | 889 | 51 | <> | K03088 | rpoE | rpoE; RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > amn:RAM_02440(230) | 193 | 73.1 | 889 | 51 | <- | K03088 | rpoE | RNA polymerase sigma-70 factor, ECF subfamily protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > amz:B737_0475(230) | 193 | 73.1 | 889 | 51 | <> | K03088 | rpoE | rpoE; RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > amyc:CU254_01120(232) | 230 | 63.9 | 884 | 28 | <> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aoi:AORI_0478(232) | 194 | 72.7 | 883 | 37 | <> | K03088 | rpoE | rpoE; RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aroo:NQK81_20425(232) | 194 | 72.7 | 883 | 39 | <> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > arhd:VSH64_39990(?) | 188 | 72.9 | 880 | 0 | -- | - | |||
| > rant:RHODO2019_01705(?) | 177 | 74.0 | 855 | 0 | -- | - | |||
| > sacc:EYD13_01630(213) | 200 | 68.5 | 848 | 10 | <- | K03088 | rpoE | sigM1; RNA polymerase sigma factor SigM; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aab:A4R43_32865(226) | 188 | 69.1 | 845 | 26 | <> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aacd:LWP59_02100(196) | 192 | 67.7 | 845 | 26 | <> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pmad:BAY61_01965(213) | 188 | 70.7 | 845 | 15 | <> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ppel:H6H00_11285(238) | 177 | 72.3 | 843 | 23 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > amyy:YIM_45355(226) | 197 | 65.5 | 838 | 38 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > svi:Svir_02810(223) | 185 | 71.9 | 833 | 10 | <> | K03088 | rpoE | RNA polymerase sigma factor, sigma-70 family; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > athm:L1857_04835(215) | 204 | 66.7 | 831 | 22 | <> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > paut:Pdca_60610(329) | 183 | 70.5 | 829 | 134 | <> | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > phh:AFB00_14335(240) | 183 | 71.0 | 829 | 16 | <> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pbro:HOP40_11225(221) | 177 | 70.6 | 821 | 23 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > amq:AMETH_0444(215) | 204 | 65.2 | 816 | 27 | <> | K03088 | rpoE | rpoE; RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pecq:AD017_16505(212) | 183 | 69.4 | 813 | 13 | <> | K03088 | rpoE | RNA polymerase sigma70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pseq:AD006_08675(212) | 183 | 69.4 | 813 | 13 | <> | K03088 | rpoE | RNA polymerase sigma70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > psea:WY02_13180(212) | 183 | 68.9 | 808 | 10 | <> | K03088 | rpoE | RNA polymerase sigma70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pseh:XF36_00455(212) | 183 | 68.9 | 808 | 8 | <> | K03088 | rpoE | RNA polymerase sigma70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sen:SACE_6951(293) | 191 | 66.5 | 808 | 80 | <- | K03088 | rpoE | putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > blap:MVA48_18610(247) | 189 | 66.1 | 807 | 35 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > mmar:MODMU_4999(210) | 180 | 68.3 | 807 | 24 | <> | K03088 | rpoE | sigX; RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sace:GIY23_20985(206) | 180 | 68.3 | 795 | 6 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bsd:BLASA_4480(259) | 177 | 67.2 | 781 | 44 | <> | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > acta:C1701_12780(190) | 184 | 65.8 | 762 | 16 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pdx:Psed_5625(202) | 180 | 64.4 | 754 | 21 | <> | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aey:CDG81_20900(247) | 186 | 64.5 | 748 | 24 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > jtl:M6D93_02445(289) | 186 | 61.8 | 742 | 11 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stri:C7M71_017505(259) | 211 | 58.3 | 742 | 14 | -> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgob:test1122_15125(266) | 197 | 58.9 | 737 | 13 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > srk:FGW37_14890(277) | 207 | 58.5 | 735 | 25 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scad:DN051_17815(256) | 193 | 60.6 | 733 | 31 | -> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sbh:SBI_06006(270) | 193 | 59.6 | 732 | 43 | -> | K03088 | rpoE | AdsA-like sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgb:WQO_14825(259) | 199 | 58.8 | 732 | 26 | -> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kab:B7C62_14195(259) | 212 | 57.1 | 731 | 24 | -> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > plab:C6361_11750(291) | 188 | 60.6 | 731 | 141 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > plat:C6W10_08860(291) | 188 | 60.6 | 731 | 140 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scha:CP983_18625(257) | 193 | 60.1 | 731 | 36 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgrf:SGFS_069300(?) | 212 | 57.1 | 731 | 0 | -- | - | |||
| > sgv:B1H19_19700(261) | 197 | 58.9 | 731 | 15 | -> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sld:T261_4497(261) | 197 | 58.9 | 731 | 18 | -> | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > slk:SLUN_22755(264) | 199 | 59.8 | 731 | 26 | -> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sseo:D0Z67_16470(261) | 197 | 59.4 | 731 | 15 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sfa:Sfla_3545(261) | 199 | 58.3 | 730 | 18 | -> | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgj:IAG43_17895(281) | 208 | 57.7 | 730 | 44 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sanu:K7396_19440(262) | 197 | 58.9 | 729 | 14 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sge:DWG14_03706(257) | 193 | 60.1 | 729 | 30 | -> | K03088 | rpoE | sigL_2; ECF RNA polymerase sigma factor SigL; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sjn:RI060_17780(?) | 192 | 59.9 | 729 | 0 | -- | - | |||
| > skg:KJK29_15545(?) | 192 | 59.9 | 729 | 0 | -- | - | |||
| > sspo:DDQ41_18215(278) | 183 | 62.3 | 728 | 22 | -> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sfi:SFUL_2998(258) | 212 | 57.1 | 727 | 15 | -> | K03088 | rpoE | ECF sigma factor AdsA; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgal:CP966_20830(256) | 193 | 59.6 | 727 | 24 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > shun:DWB77_03416(262) | 197 | 58.4 | 727 | 18 | -> | K03088 | rpoE | sigX; ECF RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stry:EQG64_14440(258) | 183 | 62.3 | 727 | 9 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > salj:SMD11_3706(268) | 193 | 60.1 | 726 | 25 | -> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sall:SAZ_20975(262) | 191 | 59.7 | 726 | 22 | -> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > salu:DC74_3969(262) | 191 | 59.7 | 726 | 20 | -> | K03088 | rpoE | ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sata:C5746_18535(258) | 198 | 58.6 | 726 | 21 | -> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scal:I6J39_19880(259) | 210 | 56.7 | 726 | 19 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scya:EJ357_26465(257) | 197 | 58.9 | 726 | 30 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sma:SAVERM_4735(258) | 199 | 58.3 | 726 | 23 | -> | K03088 | rpoE | bds; putative RNA polymerase ECF-subfamily sigma factor (BldN); K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > snr:SNOUR_22510(262) | 191 | 59.7 | 726 | 17 | -> | K03088 | rpoE | RNA polymerase sigma-70 factor, TIGR02952 family; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > snz:DC008_19740(257) | 192 | 59.9 | 726 | 28 | -> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stre:GZL_04927(262) | 191 | 59.7 | 726 | 21 | -> | K03088 | rpoE | RNA polymerase C sigma-24 subunit C ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > svu:B1H20_20065(259) | 210 | 56.7 | 726 | 18 | -> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > syun:MOV08_22925(?) | 191 | 59.7 | 726 | 0 | -- | - | |||
| > cati:CS0771_08550(308) | 196 | 58.2 | 725 | 49 | <> | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kbu:Q4V64_30035(?) | 193 | 59.6 | 725 | 0 | -- | - | |||
| > saq:Sare_0420(310) | 188 | 60.1 | 725 | 55 | -> | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scir:STRCI_004614(257) | 193 | 59.6 | 725 | 40 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scyg:S1361_22385(259) | 193 | 59.6 | 725 | 31 | -> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sdur:M4V62_19590(263) | 187 | 61.0 | 725 | 29 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sdv:BN159_3983(257) | 193 | 59.6 | 725 | 39 | -> | K03088 | rpoE | AdsA-like sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgd:ELQ87_16910(257) | 193 | 59.6 | 725 | 20 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > shau:K9S39_24435(?) | 197 | 58.4 | 725 | 0 | -- | - | |||
| > slon:LGI35_25495(263) | 200 | 59.0 | 725 | 29 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > slv:SLIV_21180(264) | 211 | 57.3 | 725 | 23 | -> | K03088 | rpoE | ECF sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > smob:J7W19_14715(270) | 201 | 58.7 | 725 | 29 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > salb:XNR_3527(268) | 193 | 60.1 | 724 | 18 | -> | K03088 | rpoE | BldN RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |