GFIT result for
fae
|
GFIT result for
fae
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| fae:FAES_4716 (182 a.a.) |
-- |
K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > fib:A6C57_21260(172) | 172 | 88.4 | 995 | 17 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > soq:LQ777_13610(172) | 172 | 77.9 | 879 | 11 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > sfol:H3H32_09550(?) | 172 | 76.2 | 865 | 0 | -- | - | |||
| > spib:G8759_18090(172) | 172 | 74.4 | 853 | 16 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > spik:EXU85_18040(172) | 172 | 75.6 | 851 | 15 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > srd:SD10_07035(172) | 172 | 73.8 | 847 | 8 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > senf:GJR95_00940(?) | 172 | 73.3 | 845 | 0 | -- | - | |||
| > sli:Slin_3339(172) | 172 | 72.7 | 837 | 16 | <- | K03088 | rpoE | ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > dfq:NFI81_02065(172) | 172 | 72.7 | 827 | 12 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > dcn:MUK70_02740(172) | 172 | 73.3 | 817 | 14 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > dyc:NFI80_09665(172) | 172 | 72.7 | 813 | 10 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > dsn:HWI92_09530(172) | 172 | 70.9 | 802 | 10 | <- | RNA polymerase sigma factor | |||
| > dpf:ON006_14660(?) | 172 | 70.9 | 800 | 0 | -- | - | |||
| > rup:DTQ70_22835(172) | 172 | 59.9 | 714 | 7 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > emz:MB380_19115(?) | 171 | 59.1 | 670 | 0 | -- | - | |||
| > aswu:HUW51_14555(170) | 169 | 58.0 | 635 | 13 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > add:HUW48_19080(170) | 169 | 54.4 | 613 | 10 | <- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > rud:TH61_05035(169) | 168 | 51.8 | 604 | 5 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > rhoz:GXP67_19060(170) | 171 | 53.2 | 600 | 14 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > nib:GU926_10880(169) | 168 | 51.2 | 595 | 10 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > rti:DC20_09210(169) | 170 | 50.0 | 590 | 7 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > tpel:P0M28_28020(?) | 168 | 52.4 | 582 | 0 | -- | - | |||
| > rsr:T7867_11945(?) | 169 | 48.5 | 534 | 0 | -- | - | |||
| > dori:FH5T_16470(181) | 166 | 44.0 | 506 | 12 | -- | RNA polymerase sigma70 factor | |||
| > mcos:GM418_18525(196) | 161 | 43.5 | 498 | 59 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fbt:D770_13750(176) | 173 | 43.9 | 495 | 7 | <- | ECF subfamily RNA polymerase sigma-24 subunit | |||
| > drc:G0Q07_08405(181) | 171 | 42.1 | 485 | 18 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > anf:AQPE_1080(?) | 163 | 41.1 | 477 | 0 | -- | - | |||
| > mrs:Murru_0053(169) | 168 | 42.3 | 467 | 6 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mlio:NYZ99_10915(170) | 169 | 41.4 | 466 | 2 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mut:GVT53_09130(169) | 168 | 42.3 | 466 | 8 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pfai:NXY11_14300(169) | 171 | 41.5 | 464 | 27 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sinh:LS482_15900(169) | 168 | 42.3 | 464 | 14 | <- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > maqi:LDL77_00285(169) | 168 | 41.7 | 463 | 10 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aalg:AREALGSMS7_04735(169) | 168 | 41.1 | 461 | 8 | <- | K03088 | rpoE | ECF RNA polymerase sigma factor SigW; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > chk:D4L85_13060(170) | 168 | 39.9 | 460 | 28 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > marb:CJ263_17730(170) | 169 | 40.8 | 460 | 6 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pgol:K6V26_15215(169) | 169 | 42.0 | 459 | 28 | <- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > parc:CI960_14745(183) | 182 | 37.4 | 458 | 16 | <- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pdi:BDI_1928(183) | 182 | 37.4 | 458 | 17 | <- | K03088 | rpoE | putative RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > tmar:MARIT_1740(169) | 170 | 41.2 | 458 | 0 | <- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > flg:LV716_14860(169) | 170 | 41.8 | 457 | 7 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > lut:Lupro_01925(169) | 170 | 41.2 | 457 | 2 | <- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > chrw:KA713_21120(170) | 169 | 39.6 | 456 | 13 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > emar:D1013_10765(169) | 168 | 42.3 | 456 | 4 | <- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pmer:INE87_02634(172) | 172 | 45.3 | 456 | 20 | -- | K03088 | rpoE | sigV; RNA polymerase sigma factor SigV; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kan:IMCC3317_00690(169) | 170 | 42.9 | 454 | 5 | -- | K03088 | rpoE | sigW_1; ECF RNA polymerase sigma factor SigW; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > asag:FGM00_09495(169) | 170 | 41.8 | 453 | 5 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kos:KORDIASMS9_04005(169) | 170 | 41.8 | 453 | 5 | -- | K03088 | rpoE | sigH; ECF RNA polymerase sigma factor SigH; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mur:EQY75_07790(169) | 168 | 40.5 | 453 | 4 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mare:EJ994_03465(169) | 168 | 40.5 | 452 | 4 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mart:BTR34_00290(169) | 170 | 42.9 | 452 | 1 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > flb:LV704_16155(169) | 170 | 42.9 | 451 | 3 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > phg:KCTC32516_02065(?) | 170 | 42.4 | 451 | 0 | -- | - | |||
| > pjo:LK449_16555(172) | 169 | 41.4 | 451 | 14 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ccm:Ccan_05890(167) | 166 | 41.6 | 450 | 3 | <- | K03088 | rpoE | Probable RNA polymerase sigma factor rfaY; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fpsz:AMR72_05245(171) | 169 | 43.2 | 449 | 2 | <- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > cagg:HYG79_00650(169) | 170 | 41.2 | 448 | 5 | <- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > plit:K8354_06015(169) | 170 | 40.0 | 447 | 5 | <- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > cbat:M666_18055(169) | 163 | 42.3 | 446 | 5 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > flo:K1I41_11735(171) | 169 | 41.4 | 446 | 2 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > cao:Celal_0059(169) | 163 | 42.3 | 445 | 3 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > cbal:M667_18050(169) | 163 | 42.3 | 445 | 4 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > falb:HYN59_09745(171) | 169 | 42.0 | 445 | 2 | <- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ppn:Palpr_1804(166) | 164 | 40.2 | 445 | 4 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > rbi:RB2501_00191(170) | 171 | 41.5 | 444 | 6 | <- | K03088 | rpoE | putative extracytoplasmic function alternative sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fbe:FF125_11480(169) | 170 | 41.8 | 442 | 7 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > gaa:HX109_12085(170) | 168 | 39.9 | 442 | 5 | <- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > lul:LPB138_03695(169) | 170 | 40.6 | 442 | 5 | <- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ten:LPB136_03395(169) | 170 | 40.0 | 442 | 1 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bsal:K6V25_11790(173) | 166 | 42.2 | 441 | 8 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > spon:HME9304_00060(169) | 170 | 41.2 | 441 | 5 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > afla:FHG64_18710(171) | 169 | 40.8 | 440 | 3 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mesq:C7H62_0077(169) | 170 | 41.2 | 440 | 1 | <- | K03088 | rpoE | RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > caph:CGC49_01785(175) | 163 | 41.7 | 437 | 1 | -- | RNA polymerase subunit sigma-70 | |||
| > capq:CGC52_01735(175) | 163 | 41.7 | 437 | 1 | -- | RNA polymerase sigma factor | |||
| > fak:FUA48_16930(171) | 170 | 41.2 | 437 | 4 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fbq:D1817_07315(?) | 169 | 39.6 | 437 | 0 | -- | - | |||
| > fmm:LVD15_13940(?) | 170 | 34.1 | 437 | 0 | -- | - | |||
| > sabu:MBM09_13160(169) | 169 | 39.1 | 437 | 4 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > flw:LVD16_10185(?) | 170 | 37.1 | 436 | 0 | -- | - | |||
| > mlt:VC82_55(169) | 170 | 40.6 | 436 | 4 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pom:MED152_02895(169) | 170 | 38.8 | 436 | 2 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bfb:VU15_06925(173) | 166 | 43.4 | 435 | 12 | <- | RNA polymerase sigma70 factor | |||
| > bfe:K6V30_04160(170) | 169 | 42.0 | 435 | 6 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bfg:BF638R_1651(173) | 166 | 43.4 | 435 | 13 | <- | putative RNA polymerase ECF-type sigma factor | |||
| > bfr:BF1639(173) | 166 | 43.4 | 435 | 12 | <- | K03088 | rpoE | putative RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bfs:BF9343_1568(173) | 166 | 43.4 | 435 | 13 | <- | K03088 | rpoE | putative RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > marm:YQ22_00295(169) | 170 | 41.2 | 435 | 3 | <- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pob:LPB03_02065(169) | 170 | 38.8 | 435 | 6 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > taj:C1A40_01140(169) | 169 | 38.5 | 435 | 2 | <- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > lpal:LDL79_00535(169) | 170 | 41.2 | 433 | 4 | <- | RNA polymerase sigma factor | |||
| > ppon:MUN68_011070(?) | 170 | 38.8 | 433 | 0 | -- | - | |||
| > smis:LDL76_12830(171) | 170 | 40.0 | 433 | 2 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > zsp:MQE36_11370(169) | 170 | 40.0 | 433 | 11 | <- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > anp:FK178_05680(169) | 171 | 40.9 | 432 | 2 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fbc:FB2170_13773(159) | 160 | 42.5 | 432 | 2 | -- | K03088 | rpoE | putative RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fua:LVD17_17040(?) | 169 | 34.9 | 432 | 0 | -- | - | |||
| > prn:BW723_13785(169) | 170 | 39.4 | 432 | 5 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fat:DVK85_13070(171) | 156 | 44.2 | 431 | 1 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |