GFIT result for
pjo
|
GFIT result for
pjo
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| pjo:LK449_16555 (172 a.a.) |
-- |
K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > pmer:INE87_02634(172) | 172 | 89.5 | 1018 | 20 | <> | K03088 | rpoE | sigV; RNA polymerase sigma factor SigV; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pfai:NXY11_21350(170) | 169 | 76.3 | 893 | 35 | <> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > parc:CI960_21140(170) | 165 | 69.1 | 778 | 22 | <> | RNA polymerase sigma factor | |||
| > pdi:BDI_2994(170) | 165 | 69.1 | 778 | 19 | <> | putative RNA polymerase ECF-type sigma factor | |||
| > bvu:BVU_0772(170) | 171 | 56.7 | 616 | 11 | -> | putative RNA polymerase ECF-type sigma factor | |||
| > bdh:GV66_03605(170) | 169 | 54.4 | 611 | 10 | <> | RNA polymerase sigma70 factor | |||
| > bdo:EL88_23120(170) | 171 | 55.0 | 610 | 11 | <> | RNA polymerase sigma70 factor | |||
| > bsal:K6V25_10825(171) | 174 | 54.0 | 595 | 12 | -> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bun:Bun01g_33660(171) | 169 | 53.8 | 585 | 8 | -> | K03088 | rpoE | DNA-directed RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bhl:Bache_1709(168) | 169 | 55.0 | 577 | 10 | -> | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > bhum:JXR92_015880(171) | 169 | 53.3 | 576 | 4 | -> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bfb:VU15_05295(171) | 174 | 51.1 | 572 | 18 | -> | RNA polymerase sigma70 factor | |||
| > bfe:K6V30_04160(170) | 171 | 53.8 | 571 | 6 | <> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bis:DXK01_012545(171) | 169 | 52.1 | 571 | 8 | -> | RNA polymerase sigma factor | |||
| > bcel:BcellWH2_04645(171) | 169 | 52.7 | 568 | 11 | -> | sigJ; ECF RNA polymerase sigma factor SigJ | |||
| > bfg:BF638R_1243(171) | 174 | 50.6 | 568 | 18 | -> | K03088 | rpoE | putative RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bfr:BF1211(171) | 174 | 50.6 | 568 | 17 | -> | K03088 | rpoE | putative RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bfs:BF9343_1119(171) | 174 | 50.6 | 568 | 18 | -> | putative RNA polymerase ECF-type sigma factor | |||
| > tfo:BFO_0919(162) | 159 | 50.9 | 549 | 2 | <> | K03088 | rpoE | Sigma-70 region 2; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > dys:G7050_05890(167) | 169 | 46.7 | 544 | 3 | <> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > dyh:G7051_06155(?) | 169 | 46.7 | 543 | 0 | -- | - | |||
| > soq:LQ777_13610(172) | 169 | 42.0 | 475 | 11 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > dcn:MUK70_02740(172) | 169 | 40.8 | 467 | 14 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > dsn:HWI92_09530(172) | 171 | 42.7 | 465 | 10 | -- | RNA polymerase sigma factor | |||
| > senf:GJR95_00940(?) | 169 | 41.4 | 465 | 0 | -- | - | |||
| > spib:G8759_18090(172) | 169 | 40.8 | 465 | 16 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > sfol:H3H32_09550(?) | 169 | 41.4 | 463 | 0 | -- | - | |||
| > sli:Slin_3339(172) | 169 | 42.0 | 463 | 16 | -- | K03088 | rpoE | ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > dpf:ON006_14660(?) | 169 | 40.8 | 460 | 0 | -- | - | |||
| > spik:EXU85_18040(172) | 169 | 42.6 | 459 | 15 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > add:HUW48_19080(170) | 169 | 42.0 | 456 | 10 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > rti:DC20_09210(169) | 168 | 43.5 | 455 | 7 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > dfq:NFI81_02065(172) | 169 | 40.8 | 454 | 12 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > fae:FAES_4716(182) | 169 | 41.4 | 451 | 17 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > rup:DTQ70_22835(172) | 174 | 42.0 | 451 | 7 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > aswu:HUW51_14555(170) | 169 | 43.8 | 449 | 13 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fib:A6C57_21260(172) | 170 | 42.9 | 448 | 17 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pfus:ADJ77_06105(169) | 163 | 42.9 | 444 | 4 | <> | RNA polymerase subunit sigma-70 | |||
| > pscj:J4856_05550(169) | 163 | 41.7 | 443 | 4 | <> | RNA polymerase sigma factor | |||
| > rud:TH61_05035(169) | 168 | 43.5 | 443 | 5 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pary:A4V02_03025(165) | 163 | 41.1 | 439 | 1 | -- | hypothetical protein | |||
| > ddb:E7747_06155(?) | 165 | 42.4 | 438 | 0 | -- | - | |||
| > nib:GU926_10880(169) | 169 | 42.6 | 438 | 10 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pmz:HMPREF0659_A5061(169) | 172 | 41.9 | 437 | 2 | <> | Sigma-70 region 2 | |||
| > dyc:NFI80_09665(172) | 168 | 38.7 | 435 | 10 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > tpel:P0M28_28020(?) | 168 | 40.5 | 430 | 0 | -- | - | |||
| > srd:SD10_07035(172) | 169 | 39.6 | 427 | 8 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > iro:RT717_08185(?) | 165 | 40.6 | 426 | 0 | -- | - | |||
| > pbuc:LK429_05255(170) | 164 | 43.3 | 426 | 1 | <> | sigma-70 family RNA polymerase sigma factor | |||
| > chk:D4L85_23985(166) | 169 | 40.2 | 418 | 29 | -- | RNA polymerase sigma factor | |||
| > pdn:HMPREF9137_0636(171) | 165 | 41.8 | 418 | 4 | <> | Sigma-70 region 2 | |||
| > tje:TJEJU_2341(169) | 168 | 39.9 | 418 | 5 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > rsr:T7867_11945(?) | 171 | 42.7 | 417 | 0 | -- | - | |||
| > osp:Odosp_2242(164) | 160 | 41.3 | 415 | 16 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > phal:H9I45_02470(169) | 168 | 39.3 | 414 | 6 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > rhoz:GXP67_19060(170) | 171 | 39.8 | 412 | 14 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > phg:KCTC32516_02065(?) | 168 | 39.3 | 411 | 0 | -- | - | |||
| > emz:MB380_19115(?) | 169 | 38.5 | 410 | 0 | -- | - | |||
| > fbt:D770_13750(176) | 173 | 39.9 | 410 | 7 | -- | ECF subfamily RNA polymerase sigma-24 subunit | |||
| > pcea:J3359_02380(169) | 168 | 39.3 | 410 | 9 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pola:BXQ17_03020(169) | 168 | 39.3 | 409 | 7 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pom:MED152_02895(169) | 168 | 38.1 | 409 | 2 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pun:NQP51_02495(169) | 168 | 39.3 | 408 | 2 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ten:LPB136_03395(169) | 168 | 39.9 | 408 | 1 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > prn:BW723_13785(169) | 168 | 38.1 | 407 | 5 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > tov:PG911_07830(169) | 168 | 38.7 | 406 | 4 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pbat:JL193_01270(169) | 168 | 38.1 | 405 | 11 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ppec:H9W90_04600(169) | 168 | 38.1 | 405 | 5 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > poa:CW731_02520(169) | 168 | 38.1 | 404 | 3 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pet:PEIBARAKI_4122(168) | 164 | 39.0 | 403 | 7 | <> | Hypothetical protein | |||
| > pob:LPB03_02065(169) | 168 | 37.5 | 401 | 6 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > trt:PG912_07445(169) | 168 | 38.7 | 401 | 6 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > plit:K8354_06015(169) | 168 | 38.7 | 400 | 5 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pni:J5A59_04980(166) | 164 | 36.0 | 399 | 4 | <> | RNA polymerase sigma factor | |||
| > pmuc:ING2E5A_0123(168) | 164 | 36.6 | 398 | 6 | <> | RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:KDS52101,1} | |||
| > pit:PIN17_A0450(166) | 164 | 36.0 | 397 | 4 | <> | sigma-70, region 4 | |||
| > tmar:MARIT_1740(169) | 168 | 38.1 | 396 | 0 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ttg:P8625_04075(?) | 168 | 37.5 | 396 | 0 | -- | - | |||
| > dori:FH5T_16470(181) | 164 | 39.0 | 395 | 12 | -- | RNA polymerase sigma70 factor | |||
| > marm:YQ22_00295(169) | 168 | 37.5 | 393 | 3 | -> | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > alut:O5O44_05860(169) | 169 | 37.9 | 392 | 0 | -- | RNA polymerase sigma factor | |||
| > caph:CGC49_01785(175) | 164 | 40.9 | 392 | 1 | -- | RNA polymerase subunit sigma-70 | |||
| > capq:CGC52_01735(175) | 164 | 40.9 | 392 | 1 | -- | RNA polymerase sigma factor | |||
| > bhf:C3V43_04975(173) | 162 | 38.9 | 391 | 7 | -- | RNA polymerase subunit sigma-70 | |||
| > pgol:K6V26_15215(169) | 165 | 43.6 | 391 | 28 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > gaa:HX109_12085(170) | 168 | 36.9 | 390 | 5 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mart:BTR34_00290(169) | 168 | 36.9 | 390 | 1 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > marx:INR76_09455(168) | 168 | 38.7 | 390 | 5 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pcou:L6468_14100(172) | 167 | 35.9 | 389 | 0 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > tsig:D6T69_09220(?) | 168 | 36.9 | 389 | 0 | -- | - | |||
| > csac:SIO70_17060(?) | 169 | 36.1 | 388 | 0 | -- | - | |||
| > mare:EJ994_03465(169) | 168 | 36.9 | 388 | 4 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > drc:G0Q07_08405(181) | 164 | 37.8 | 387 | 18 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > kan:IMCC3317_00690(169) | 168 | 36.3 | 387 | 5 | -- | K03088 | rpoE | sigW_1; ECF RNA polymerase sigma factor SigW; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > faz:M0M57_10260(169) | 168 | 38.1 | 386 | 3 | -> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ptq:P700755_000187(169) | 168 | 37.5 | 386 | 1 | -- | RNA polymerase sigma-70 factor | |||
| > pcop:I6J50_16570(169) | 165 | 35.8 | 385 | 10 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > csto:CGC58_00950(166) | 173 | 39.3 | 384 | 3 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > marb:CJ263_17730(170) | 168 | 36.9 | 384 | 6 | -> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pher:prwr041_11740(163) | 161 | 41.6 | 384 | 3 | -> | DNA-directed RNA polymerase sigma-70 factor | |||