GFIT result for
dsn
|
GFIT result for
dsn
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| dsn:HWI92_09530 (172 a.a.) |
-- |
RNA polymerase sigma factor | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > dfq:NFI81_02065(172) | 172 | 79.7 | 911 | 12 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > dyc:NFI80_09665(172) | 172 | 80.2 | 906 | 10 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > dcn:MUK70_02740(172) | 172 | 80.2 | 905 | 14 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > dpf:ON006_14660(?) | 172 | 74.4 | 839 | 0 | -- | - | |||
| > spib:G8759_18090(172) | 172 | 73.3 | 835 | 16 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > senf:GJR95_00940(?) | 172 | 73.3 | 834 | 0 | -- | - | |||
| > soq:LQ777_13610(172) | 172 | 73.3 | 824 | 11 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > fae:FAES_4716(182) | 172 | 70.9 | 802 | 17 | <- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > srd:SD10_07035(172) | 172 | 67.4 | 801 | 8 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sli:Slin_3339(172) | 172 | 67.4 | 799 | 16 | <- | K03088 | rpoE | ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > spik:EXU85_18040(172) | 172 | 71.5 | 798 | 15 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fib:A6C57_21260(172) | 172 | 70.3 | 794 | 17 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sfol:H3H32_09550(?) | 172 | 69.8 | 789 | 0 | -- | - | |||
| > rup:DTQ70_22835(172) | 172 | 57.6 | 700 | 7 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > emz:MB380_19115(?) | 171 | 56.7 | 657 | 0 | -- | - | |||
| > aswu:HUW51_14555(170) | 171 | 53.8 | 606 | 13 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > add:HUW48_19080(170) | 173 | 52.6 | 603 | 10 | <- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > rhoz:GXP67_19060(170) | 169 | 52.1 | 600 | 14 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > tpel:P0M28_28020(?) | 168 | 51.2 | 569 | 0 | -- | - | |||
| > rti:DC20_09210(169) | 168 | 47.6 | 568 | 7 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > rud:TH61_05035(169) | 170 | 49.4 | 564 | 5 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > nib:GU926_10880(169) | 168 | 47.6 | 553 | 10 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > rsr:T7867_11945(?) | 170 | 48.8 | 546 | 0 | -- | - | |||
| > fbt:D770_13750(176) | 170 | 42.9 | 490 | 7 | <- | ECF subfamily RNA polymerase sigma-24 subunit | |||
| > flo:K1I41_11735(171) | 169 | 45.6 | 490 | 2 | <- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > marb:CJ263_17730(170) | 172 | 42.4 | 481 | 6 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mlio:NYZ99_10915(170) | 172 | 42.4 | 481 | 2 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fpsz:AMR72_05245(171) | 169 | 45.6 | 479 | 2 | <- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pmer:INE87_02634(172) | 173 | 45.1 | 477 | 20 | -- | K03088 | rpoE | sigV; RNA polymerase sigma factor SigV; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > flb:LV704_16155(169) | 171 | 43.3 | 474 | 3 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > phg:KCTC32516_02065(?) | 168 | 43.5 | 473 | 0 | -- | - | |||
| > falb:HYN59_09745(171) | 169 | 44.4 | 471 | 2 | <- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > maqi:LDL77_00285(169) | 174 | 43.1 | 470 | 10 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > plit:K8354_06015(169) | 168 | 41.1 | 470 | 5 | <- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > lut:Lupro_01925(169) | 168 | 41.1 | 469 | 2 | <- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mrs:Murru_0053(169) | 174 | 43.1 | 467 | 6 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ten:LPB136_03395(169) | 168 | 41.7 | 467 | 1 | <- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sinh:LS482_15900(169) | 174 | 42.0 | 466 | 14 | <- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pjo:LK449_16555(172) | 171 | 42.7 | 465 | 14 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fak:FUA48_16930(171) | 169 | 45.0 | 464 | 4 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > feh:LZF87_14080(169) | 169 | 43.8 | 464 | 3 | <- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > tov:PG911_07830(169) | 168 | 39.9 | 464 | 4 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > flg:LV716_14860(169) | 172 | 42.4 | 463 | 7 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > asag:FGM00_09495(169) | 168 | 39.9 | 461 | 5 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fcb:LOS89_04415(171) | 169 | 45.6 | 461 | 3 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fcu:NOX80_08740(172) | 169 | 44.4 | 461 | 3 | <- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fop:FNB79_15760(169) | 168 | 38.7 | 459 | 5 | <- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > hws:RNZ46_03160(?) | 168 | 38.7 | 459 | 0 | -- | - | |||
| > kan:IMCC3317_00690(169) | 169 | 40.8 | 459 | 5 | <- | K03088 | rpoE | sigW_1; ECF RNA polymerase sigma factor SigW; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kos:KORDIASMS9_04005(169) | 168 | 39.9 | 459 | 5 | -- | K03088 | rpoE | sigH; ECF RNA polymerase sigma factor SigH; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mesq:C7H62_0077(169) | 168 | 40.5 | 459 | 1 | <- | K03088 | rpoE | RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sze:AW14_07505(169) | 168 | 38.1 | 459 | 2 | <- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fek:C1H87_19845(169) | 163 | 38.7 | 458 | 26 | <- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mart:BTR34_00290(169) | 171 | 41.5 | 458 | 1 | <- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ppec:H9W90_04600(169) | 168 | 39.9 | 458 | 5 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > prn:BW723_13785(169) | 168 | 40.5 | 458 | 5 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aalg:AREALGSMS7_04735(169) | 171 | 42.1 | 457 | 8 | <- | K03088 | rpoE | ECF RNA polymerase sigma factor SigW; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fbq:D1817_07315(?) | 168 | 39.3 | 457 | 0 | -- | - | |||
| > gaa:HX109_12085(170) | 171 | 41.5 | 457 | 5 | <- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > rbi:RB2501_00191(170) | 175 | 41.7 | 457 | 6 | -- | K03088 | rpoE | putative extracytoplasmic function alternative sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > trt:PG912_07445(169) | 168 | 39.9 | 457 | 6 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fpb:NLJ00_00520(169) | 169 | 42.0 | 456 | 6 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > tmar:MARIT_1740(169) | 168 | 39.9 | 456 | 0 | <- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > emar:D1013_10765(169) | 174 | 42.0 | 455 | 4 | <- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fcc:LOS86_09735(171) | 168 | 45.2 | 455 | 3 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > tje:TJEJU_2341(169) | 168 | 39.3 | 455 | 5 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fgl:EM308_17330(169) | 169 | 42.6 | 454 | 2 | <- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mut:GVT53_09130(169) | 174 | 42.0 | 454 | 8 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pcea:J3359_02380(169) | 168 | 39.3 | 454 | 9 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fok:KK2020170_24940(?) | 169 | 43.8 | 453 | 0 | -- | - | |||
| > marm:YQ22_00295(169) | 171 | 41.5 | 453 | 3 | <- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > phal:H9I45_02470(169) | 168 | 39.3 | 453 | 6 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pob:LPB03_02065(169) | 168 | 39.9 | 453 | 6 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sabu:MBM09_13160(169) | 169 | 38.5 | 453 | 4 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > alut:O5O44_05860(169) | 168 | 38.7 | 452 | 0 | <- | RNA polymerase sigma factor | |||
| > pbat:JL193_01270(169) | 168 | 39.3 | 452 | 11 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > psyn:E9099_12780(169) | 168 | 38.7 | 452 | 4 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ffl:HYN86_00460(169) | 169 | 43.2 | 451 | 8 | <- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > marf:CJ739_341(169) | 168 | 38.1 | 451 | 13 | <- | K03088 | rpoE | ECF RNA polymerase sigma factor SigW; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mlt:VC82_55(169) | 171 | 41.5 | 451 | 4 | <- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > clh:IX49_00420(169) | 169 | 40.8 | 450 | 2 | <- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > cly:Celly_0151(169) | 169 | 40.8 | 450 | 4 | <- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > oll:CW732_16240(169) | 168 | 38.7 | 450 | 5 | <- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aest:RBH94_10875(?) | 168 | 38.1 | 449 | 0 | -- | - | |||
| > bsal:K6V25_10825(171) | 169 | 39.1 | 449 | 12 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > comn:PBN93_00735(169) | 169 | 40.2 | 449 | 3 | <- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fjo:Fjoh_0094(169) | 169 | 41.4 | 449 | 6 | <- | K03088 | rpoE | ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > parc:CI960_21140(170) | 168 | 42.9 | 449 | 22 | -- | RNA polymerase sigma factor | |||
| > pdi:BDI_2994(170) | 168 | 42.9 | 449 | 19 | -- | putative RNA polymerase ECF-type sigma factor | |||
| > ppon:MUN68_011070(?) | 168 | 39.9 | 449 | 0 | -- | - | |||
| > fhu:M0M44_00490(169) | 169 | 42.0 | 448 | 7 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fjg:BB050_02411(169) | 169 | 42.0 | 448 | 7 | <- | K03088 | rpoE | sigE_2; ECF RNA polymerase sigma factor SigE; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > lul:LPB138_03695(169) | 168 | 40.5 | 448 | 5 | <- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > taj:C1A40_01140(169) | 169 | 39.1 | 448 | 2 | <- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > tpac:PG913_07540(169) | 168 | 38.7 | 448 | 1 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fse:DI487_02390(171) | 170 | 44.1 | 447 | 2 | <- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mare:EJ994_03465(169) | 174 | 40.2 | 447 | 4 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > oci:FEZ18_02470(169) | 168 | 38.7 | 447 | 4 | <- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > poa:CW731_02520(169) | 168 | 39.3 | 447 | 3 | <- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pun:NQP51_02495(169) | 168 | 38.7 | 447 | 2 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |