GFIT result for
rud
|
GFIT result for
rud
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| rud:TH61_05035 (169 a.a.) |
-- |
K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > nib:GU926_10880(169) | 169 | 88.8 | 982 | 10 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > rti:DC20_09210(169) | 169 | 85.8 | 955 | 7 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > add:HUW48_19080(170) | 169 | 58.6 | 651 | 10 | -> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aswu:HUW51_14555(170) | 169 | 58.6 | 645 | 13 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fae:FAES_4716(182) | 168 | 51.8 | 604 | 17 | -> | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > rsr:T7867_11945(?) | 167 | 54.5 | 602 | 0 | -- | - | |||
| > rhoz:GXP67_19060(170) | 169 | 53.3 | 597 | 14 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fib:A6C57_21260(172) | 168 | 50.0 | 592 | 17 | -> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > srd:SD10_07035(172) | 168 | 51.8 | 584 | 8 | -> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sfol:H3H32_09550(?) | 168 | 51.8 | 582 | 0 | -- | - | |||
| > sli:Slin_3339(172) | 168 | 51.8 | 582 | 16 | -> | K03088 | rpoE | ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > senf:GJR95_00940(?) | 168 | 52.4 | 581 | 0 | -- | - | |||
| > spik:EXU85_18040(172) | 168 | 53.0 | 581 | 15 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > spib:G8759_18090(172) | 168 | 51.8 | 578 | 16 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > dsn:HWI92_09530(172) | 170 | 49.4 | 564 | 10 | -> | RNA polymerase sigma factor | |||
| > soq:LQ777_13610(172) | 168 | 51.2 | 562 | 11 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > dpf:ON006_14660(?) | 168 | 51.2 | 549 | 0 | -- | - | |||
| > tpel:P0M28_28020(?) | 167 | 50.9 | 548 | 0 | -- | - | |||
| > dfq:NFI81_02065(172) | 170 | 48.2 | 536 | 12 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > dyc:NFI80_09665(172) | 168 | 46.4 | 535 | 10 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > afla:FHG64_18710(171) | 169 | 49.7 | 533 | 3 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > rup:DTQ70_22835(172) | 168 | 47.0 | 530 | 7 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > dcn:MUK70_02740(172) | 168 | 47.0 | 526 | 14 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > emz:MB380_19115(?) | 169 | 47.3 | 519 | 0 | -- | - | |||
| > gaa:HX109_12085(170) | 169 | 49.7 | 515 | 5 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > anp:FK178_05680(169) | 169 | 49.7 | 514 | 2 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kos:KORDIASMS9_04005(169) | 169 | 49.1 | 511 | 5 | -- | K03088 | rpoE | sigH; ECF RNA polymerase sigma factor SigH; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > marb:CJ263_17730(170) | 170 | 47.6 | 505 | 6 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > lul:LPB138_03695(169) | 169 | 47.9 | 504 | 5 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > gfl:GRFL_2969(169) | 169 | 47.3 | 503 | 2 | -> | K03088 | rpoE | RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > lut:Lupro_01925(169) | 169 | 47.3 | 503 | 2 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fbt:D770_13750(176) | 168 | 46.4 | 501 | 7 | -> | ECF subfamily RNA polymerase sigma-24 subunit | |||
| > fbe:FF125_11480(169) | 169 | 47.3 | 500 | 7 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mang:RBH95_06305(?) | 169 | 45.6 | 500 | 0 | -- | - | |||
| > mlio:NYZ99_10915(170) | 170 | 47.6 | 499 | 2 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > smis:LDL76_12830(171) | 169 | 46.2 | 497 | 2 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aue:C5O00_14170(168) | 169 | 48.5 | 495 | 7 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mare:EJ994_03465(169) | 169 | 47.3 | 495 | 4 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sinh:LS482_15900(169) | 169 | 47.3 | 493 | 14 | -> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ahz:APS56_15340(169) | 169 | 44.4 | 491 | 3 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fop:FNB79_15760(169) | 169 | 45.6 | 490 | 5 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kan:IMCC3317_00690(169) | 169 | 46.2 | 489 | 5 | -- | K03088 | rpoE | sigW_1; ECF RNA polymerase sigma factor SigW; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > cagg:HYG79_00650(169) | 169 | 46.2 | 488 | 5 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > rbi:RB2501_00191(170) | 169 | 47.3 | 488 | 6 | -- | K03088 | rpoE | putative extracytoplasmic function alternative sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > tmp:F9Y86_14920(169) | 169 | 45.6 | 488 | 1 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mart:BTR34_00290(169) | 169 | 46.2 | 487 | 1 | -> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mesq:C7H62_0077(169) | 169 | 44.4 | 486 | 1 | -> | K03088 | rpoE | RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aic:JK629_14600(168) | 169 | 46.2 | 485 | 4 | -> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fmm:LVD15_13940(?) | 171 | 42.1 | 485 | 0 | -- | - | |||
| > lvn:BWR22_05815(169) | 169 | 42.6 | 485 | 2 | -> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > phg:KCTC32516_02065(?) | 169 | 45.0 | 485 | 0 | -- | - | |||
| > tsig:D6T69_09220(?) | 169 | 45.0 | 485 | 0 | -- | - | |||
| > taj:C1A40_01140(169) | 169 | 44.4 | 484 | 2 | -> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > tje:TJEJU_2341(169) | 169 | 44.4 | 484 | 5 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > tmar:MARIT_1740(169) | 169 | 43.8 | 484 | 0 | -> | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bia:GMA17_06855(169) | 169 | 42.6 | 482 | 2 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > win:WPG_2609(169) | 169 | 43.8 | 482 | 5 | -> | K03088 | rpoE | RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > zsp:MQE36_11370(169) | 169 | 45.6 | 482 | 11 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > alut:O5O44_05860(169) | 169 | 44.4 | 481 | 0 | -- | RNA polymerase sigma factor | |||
| > fbq:D1817_07315(?) | 169 | 43.2 | 481 | 0 | -- | - | |||
| > marm:YQ22_00295(169) | 169 | 46.2 | 481 | 3 | -> | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ten:LPB136_03395(169) | 169 | 44.4 | 481 | 1 | -> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fek:C1H87_19845(169) | 169 | 43.8 | 480 | 26 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mur:EQY75_07790(169) | 169 | 44.4 | 480 | 4 | -> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mut:GVT53_09130(169) | 169 | 45.6 | 480 | 8 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ttg:P8625_04075(?) | 169 | 44.4 | 480 | 0 | -- | - | |||
| > marx:INR76_09455(168) | 169 | 46.7 | 479 | 5 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ppon:MUN68_011070(?) | 169 | 43.8 | 479 | 0 | -- | - | |||
| > fak:FUA48_16930(171) | 169 | 45.6 | 478 | 4 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > wij:BWZ20_14175(169) | 169 | 43.2 | 478 | 4 | -> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > anf:AQPE_1080(?) | 169 | 43.2 | 477 | 0 | -- | - | |||
| > faz:M0M57_10260(169) | 169 | 43.2 | 477 | 3 | -> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fbm:MQE35_02695(169) | 169 | 43.8 | 477 | 5 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > hws:RNZ46_03160(?) | 169 | 42.6 | 477 | 0 | -- | - | |||
| > maqi:LDL77_00285(169) | 169 | 45.6 | 477 | 10 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > marf:CJ739_341(169) | 170 | 45.9 | 477 | 13 | -- | K03088 | rpoE | ECF RNA polymerase sigma factor SigW; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > comn:PBN93_00735(169) | 169 | 45.6 | 476 | 3 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fpsz:AMR72_05245(171) | 169 | 45.0 | 476 | 2 | -> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > grs:C7S20_16055(168) | 169 | 46.2 | 476 | 1 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sze:AW14_07505(169) | 169 | 43.2 | 476 | 2 | -> | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > tov:PG911_07830(169) | 169 | 45.0 | 476 | 4 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > lan:Lacal_2017(169) | 169 | 41.4 | 475 | 4 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > oaq:DZC78_04975(169) | 169 | 42.0 | 475 | 3 | -> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > spon:HME9304_00060(169) | 169 | 45.6 | 475 | 5 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > zpr:ZPR_2064(169) | 169 | 43.2 | 475 | 6 | -- | K03088 | rpoE | RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > laci:CW733_02330(169) | 169 | 42.0 | 474 | 5 | -> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pbat:JL193_01270(169) | 169 | 43.2 | 474 | 11 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > psyn:E9099_12780(169) | 169 | 42.0 | 474 | 4 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aalg:AREALGSMS7_04735(169) | 169 | 43.2 | 473 | 8 | -- | K03088 | rpoE | ECF RNA polymerase sigma factor SigW; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > feh:LZF87_14080(169) | 169 | 43.8 | 473 | 3 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > oll:CW732_16240(169) | 169 | 42.0 | 473 | 5 | -> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > phal:H9I45_02470(169) | 169 | 43.2 | 473 | 6 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > plit:K8354_06015(169) | 169 | 42.6 | 473 | 5 | -> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > trt:PG912_07445(169) | 169 | 45.0 | 473 | 6 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > zga:ZOBELLIA_52(169) | 169 | 45.6 | 473 | 6 | -> | K03088 | rpoE | RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > falb:HYN59_09745(171) | 169 | 44.4 | 472 | 2 | -> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mrs:Murru_0053(169) | 169 | 45.0 | 472 | 6 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sabu:MBM09_13160(169) | 169 | 42.6 | 472 | 4 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aest:RBH94_10875(?) | 169 | 43.8 | 471 | 0 | -- | - | |||
| > cbal:M667_18050(169) | 169 | 45.6 | 471 | 4 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |