GFIT result for
ypb
|
GFIT result for
ypb
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| ypb:YPTS_3805 (1520 a.a.) |
-- |
YD repeat protein | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > ypo:BZ17_2985(1520) | 1520 | 99.9 | 10239 | 10 | <> | RHS repeat-associated core domain protein | |||
| > yps:YPTB3615(1520) | 1520 | 99.9 | 10239 | 8 | <> | putative membrane protein | |||
| > ypu:BZ21_2943(1520) | 1520 | 99.9 | 10239 | 9 | <> | RHS repeat-associated core domain protein | |||
| > ypc:BZ23_3215(1520) | 1520 | 99.9 | 10227 | 11 | <> | RHS repeat-associated core domain protein | |||
| > ypf:BZ19_3080(1527) | 1389 | 99.4 | 9315 | 13 | -> | RHS repeat-associated core domain protein | |||
| > ypi:YpsIP31758_0341(1527) | 1389 | 99.4 | 9315 | 13 | -> | YD/RHS repeat protein | |||
| > ypa:YPA_3420(1512) | 1401 | 98.1 | 9237 | 9 | -> | putative membrane protein | |||
| > ype:YPO3615(1512) | 1401 | 98.1 | 9237 | 9 | -> | putative membrane protein | |||
| > yph:YPC_4402(1512) | 1401 | 98.1 | 9237 | 7 | -> | putative membrane protein | |||
| > ypj:CH55_2586(1512) | 1401 | 98.1 | 9237 | 8 | -> | RHS repeat-associated core domain protein | |||
| > ypk:y0255(1514) | 1401 | 98.1 | 9237 | 8 | -> | Rhs-like core protein | |||
| > ypl:CH46_1410(1512) | 1401 | 98.1 | 9237 | 9 | -> | RHS repeat-associated core domain protein | |||
| > ypn:YPN_3555(1512) | 1401 | 98.1 | 9237 | 8 | -> | membrane protein | |||
| > ypp:YPDSF_0222(1512) | 1401 | 98.1 | 9237 | 8 | -> | membrane protein | |||
| > ypt:A1122_07485(1512) | 1401 | 98.1 | 9237 | 9 | -> | Rhs-like core protein | |||
| > ypv:BZ15_4059(1512) | 1401 | 98.1 | 9237 | 9 | -> | RHS repeat-associated core domain protein | |||
| > ypw:CH59_2370(1512) | 1401 | 98.1 | 9237 | 8 | -> | RHS repeat-associated core domain protein | |||
| > ypx:YPD8_3232(1512) | 1401 | 98.1 | 9237 | 9 | -> | hypothetical protein | |||
| > ypz:YPZ3_3105(1512) | 1401 | 98.1 | 9237 | 9 | -> | hypothetical protein | |||
| > ypm:YP_3933(1513) | 1401 | 97.9 | 9209 | 8 | -> | rhsA3; putative membrane protein | |||
| > ypd:YPD4_3093(1512) | 1401 | 97.6 | 9177 | 9 | -> | hypothetical protein | |||
| > ypy:YPK_0410(1189) | 1189 | 99.4 | 8028 | 7 | <- | YD repeat protein | |||
| > ypq:DJ40_2799(1168) | 1063 | 98.8 | 7137 | 8 | -- | RHS repeat-associated core domain protein | |||
| > ypr:BZ20_2500(1168) | 1063 | 98.8 | 7137 | 7 | -- | RHS repeat-associated core domain protein | |||
| > ysi:BF17_05685(1500) | 1415 | 69.5 | 6549 | 9 | -> | hypothetical protein | |||
| > yal:AT01_1864(1509) | 1462 | 59.4 | 5786 | 2 | -> | RHS repeat-associated core domain protein | |||
| > xbo:XBJ1_0281(1525) | 1487 | 50.0 | 4672 | 9 | -> | Putative membrane protein | |||
| > xbv:XBW1_1180(1530) | 1487 | 49.1 | 4655 | 5 | -> | Putative membrane protein | |||
| > xgr:QL128_20250(?) | 1416 | 50.6 | 4634 | 0 | -- | - | |||
| > pakh:B0X70_01635(1527) | 1422 | 49.2 | 4495 | 22 | -> | hypothetical protein | |||
| > plui:CE143_01620(1527) | 1422 | 49.2 | 4494 | 22 | -> | hypothetical protein | |||
| > plu:plu3120(1498) | 1404 | 49.4 | 4473 | 25 | -- | unnamed protein product; Some similarities with hypothetical protein. RHS protein signature. Putative transmembrane protein | |||
| > plum:A4R40_15595(1498) | 1404 | 49.4 | 4473 | 22 | -- | hypothetical protein | |||
| > xbu:HGO23_14430(1531) | 1426 | 49.2 | 4470 | 5 | -> | PAAR domain-containing protein | |||
| > xdo:XDD1_1491(1552) | 1430 | 49.1 | 4466 | 19 | -> | Putative membrane protein | |||
| > sfg:AV650_13880(1546) | 1434 | 48.0 | 4428 | 6 | -> | hypothetical protein | |||
| > erwi:GN242_06600(1545) | 1533 | 45.3 | 4215 | 20 | -> | hypothetical protein | |||
| > pay:PAU_03014(1279) | 1282 | 47.4 | 3947 | 25 | -> | Putative membrane protein | |||
| > rvc:J9880_23440(1418) | 1373 | 45.0 | 3758 | 10 | -- | DUF6531 domain-containing protein | |||
| > lya:RDV84_06435(?) | 1560 | 41.0 | 3727 | 0 | -- | - | |||
| > race:JHW33_25420(1423) | 1310 | 46.2 | 3722 | 3 | -- | RHS domain-containing protein | |||
| > xpo:XPG1_0243(1565) | 1154 | 49.0 | 3693 | 6 | -- | conserved protein of unknown function | |||
| > xnm:XNC2_1428(1545) | 1111 | 47.9 | 3445 | 17 | -- | Complete genome; segment 11/17 | |||
| > pmr:PMI1120(1703) | 1256 | 43.5 | 3440 | 2 | -- | Rhs-family protein | |||
| > ptha:OI982_05130(?) | 1186 | 43.4 | 3413 | 0 | -- | - | |||
| > psta:BGK56_00310(1588) | 1192 | 43.1 | 3407 | 5 | -- | type IV secretion protein Rhs | |||
| > psi:S70_18055(1594) | 1110 | 45.6 | 3395 | 10 | -- | Rhs family protein | |||
| > pmag:JI723_13005(1580) | 1228 | 41.9 | 3392 | 3 | -- | RHS repeat protein | |||
| > pcol:F1325_14145(1511) | 1098 | 44.4 | 3309 | 2 | -- | DUF4150 domain-containing protein | |||
| > prot:BTA34_12355(1508) | 1098 | 44.4 | 3300 | 4 | -- | hypothetical protein | |||
| > ptrl:OU419_15255(?) | 1505 | 37.7 | 2966 | 0 | -- | - | |||
| > bft:MNO13_13850(1452) | 1421 | 37.2 | 2958 | 7 | -- | DUF4150 domain-containing protein | |||
| > buf:D8682_01645(1473) | 1367 | 37.7 | 2938 | 4 | -- | DUF4150 domain-containing protein | |||
| > lew:DAI21_08465(1456) | 1141 | 42.0 | 2918 | 0 | -- | hypothetical protein | |||
| > cro:ROD_13591(1477) | 1229 | 40.0 | 2870 | 3 | -- | putative Rhs protein | |||
| > supe:P0H77_18735(1479) | 1121 | 41.7 | 2848 | 12 | -- | DUF4150 domain-containing protein | |||
| > pami:JCM7686_2967(1611) | 1498 | 34.6 | 2806 | 12 | -> | hypothetical protein | |||
| > toe:QMG90_03420(1446) | 1102 | 41.2 | 2794 | 8 | -- | DUF4150 domain-containing protein | |||
| > sbg:SBG_1846(1535) | 1114 | 40.5 | 2792 | 5 | -- | Rhs-family protein | |||
| > sbz:A464_2174(1530) | 1102 | 41.1 | 2781 | 11 | -- | hypothetical protein | |||
| > sbv:N643_09065(1543) | 1107 | 40.8 | 2777 | 10 | -- | membrane protein | |||
| > paro:CUV01_10170(1527) | 1427 | 35.2 | 2703 | 8 | -> | hypothetical protein | |||
| > pzh:CX676_10920(1356) | 1271 | 37.9 | 2655 | 5 | -- | hypothetical protein | |||
| > palp:JHW40_01745(1581) | 1431 | 34.3 | 2602 | 15 | -> | PAAR/RHS domain-containing protein | |||
| > psap:JHX88_05970(1594) | 1575 | 31.6 | 2510 | 6 | -- | PAAR domain-containing protein | |||
| > bpsl:WS57_02645(1536) | 1469 | 33.3 | 2400 | 20 | -> | hypothetical protein | |||
| > gbz:JZM60_07255(1459) | 1487 | 33.9 | 2395 | 6 | -> | PAAR domain-containing protein | |||
| > bch:Bcen2424_5023(1494) | 1422 | 34.5 | 2386 | 35 | -> | YD repeat protein | |||
| > mmai:sS8_3559(1546) | 1403 | 35.1 | 2377 | 35 | -> | putative rhs-related transmembrane protein | |||
| > bcj:BCAM2253(1515) | 1370 | 34.2 | 2357 | 51 | -> | RHS-family protein | |||
| > bceo:I35_6145(1515) | 1370 | 34.0 | 2349 | 46 | -> | Rhs-family protein | |||
| > bmul:NP80_4978(1534) | 1435 | 33.9 | 2339 | 25 | -> | RHS repeat-associated core domain protein | |||
| > bcm:Bcenmc03_5261(1487) | 1369 | 34.4 | 2338 | 38 | -> | YD repeat protein | |||
| > gma:AciX8_3261(1486) | 1378 | 33.5 | 2319 | 4 | -> | RHS repeat-associated core domain protein | |||
| > rsm:CMR15_mp20245(1475) | 1525 | 32.4 | 2318 | 27 | -> | putative rhs-related transmembrane protein | |||
| > bac:BamMC406_4951(1495) | 1371 | 33.6 | 2304 | 44 | -> | YD repeat protein | |||
| > rnc:GO999_19750(1521) | 1444 | 33.9 | 2303 | 19 | -> | hypothetical protein | |||
| > rsl:RPSI07_mp1170(1538) | 1435 | 34.1 | 2297 | 22 | -> | putative rhs-related transmembrane protein | |||
| > rse:F504_4047(1517) | 1417 | 34.2 | 2294 | 17 | -> | Phage tail fiber protein | |||
| > bgd:bgla_1g12200(1496) | 1356 | 34.5 | 2293 | 54 | -> | Rhs-related membrane protein | |||
| > bpyr:ABD05_24040(1533) | 1468 | 33.1 | 2289 | 18 | -> | membrane protein | |||
| > rpu:CDC45_23325(1517) | 1417 | 34.1 | 2279 | 28 | -> | hypothetical protein | |||
| > rso:RSp1137(1517) | 1417 | 34.1 | 2279 | 32 | -> | putative rhs-related transmembrane protein | |||
| > tcar:U0034_13540(?) | 1415 | 34.0 | 2256 | 0 | -- | - | |||
| > rsg:JK151_13280(1523) | 1442 | 33.6 | 2244 | 16 | -> | PAAR domain-containing protein | |||
| > pcaf:DSC91_001370(1461) | 1417 | 32.8 | 2205 | 21 | -> | hypothetical protein | |||
| > rwe:KOL96_01530(1541) | 1421 | 32.6 | 2198 | 18 | -> | PAAR domain-containing protein | |||
| > bpsm:BBQ_5175(1541) | 1510 | 31.5 | 2162 | 38 | -> | RHS repeat-associated core domain protein | |||
| > bpsu:BBN_4421(1541) | 1510 | 31.5 | 2162 | 37 | -> | RHS repeat-associated core domain protein | |||
| > bmal:DM55_4253(1537) | 1509 | 31.5 | 2159 | 24 | -> | RHS repeat-associated core domain protein | |||
| > bmaq:DM76_4953(1537) | 1509 | 31.5 | 2159 | 24 | -> | RHS repeat-associated core domain protein | |||
| > bmab:BM45_3338(1541) | 1510 | 31.5 | 2158 | 29 | -> | RHS repeat-associated core domain protein | |||
| > bmae:DM78_3919(1541) | 1510 | 31.5 | 2158 | 26 | -> | RHS repeat-associated core domain protein | |||
| > bmaf:DM51_4925(1541) | 1510 | 31.5 | 2158 | 30 | -> | RHS repeat-associated core domain protein | |||
| > bmai:DM57_10695(1541) | 1510 | 31.5 | 2158 | 28 | -> | type IV secretion protein Rhs | |||
| > bmaz:BM44_4216(1541) | 1510 | 31.5 | 2158 | 30 | -> | RHS repeat-associated core domain protein | |||
| > bml:BMA10229_0509(1541) | 1510 | 31.5 | 2158 | 27 | -> | YD repeat protein | |||
| > bmn:BMA10247_A1059(1541) | 1510 | 31.5 | 2158 | 28 | -- | YD repeat protein | |||
| > bmv:BMASAVP1_0238(1541) | 1510 | 31.5 | 2158 | 22 | -> | YD repeat protein | |||
| > bpd:BURPS668_A1403(1541) | 1510 | 31.5 | 2157 | 35 | -> | substrate-binding repeat protein | |||