GFIT result for
ypq
|
GFIT result for
ypq
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| ypq:DJ40_2799 (1168 a.a.) |
-- |
RHS repeat-associated core domain protein | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > ypr:BZ20_2500(1168) | 1168 | 100.0 | 7988 | 7 | <> | RHS repeat-associated core domain protein | |||
| > ypa:YPA_3420(1512) | 1166 | 92.1 | 7147 | 9 | -- | putative membrane protein | |||
| > ype:YPO3615(1512) | 1166 | 92.1 | 7147 | 9 | -- | putative membrane protein | |||
| > yph:YPC_4402(1512) | 1166 | 92.1 | 7147 | 7 | -- | putative membrane protein | |||
| > ypj:CH55_2586(1512) | 1166 | 92.1 | 7147 | 8 | -- | RHS repeat-associated core domain protein | |||
| > ypk:y0255(1514) | 1166 | 92.1 | 7147 | 8 | -- | Rhs-like core protein | |||
| > ypl:CH46_1410(1512) | 1166 | 92.1 | 7147 | 9 | -- | RHS repeat-associated core domain protein | |||
| > ypm:YP_3933(1513) | 1166 | 92.1 | 7147 | 8 | -- | rhsA3; putative membrane protein | |||
| > ypn:YPN_3555(1512) | 1166 | 92.1 | 7147 | 8 | -- | membrane protein | |||
| > ypp:YPDSF_0222(1512) | 1166 | 92.1 | 7147 | 8 | -- | membrane protein | |||
| > ypt:A1122_07485(1512) | 1166 | 92.1 | 7147 | 9 | -- | Rhs-like core protein | |||
| > ypv:BZ15_4059(1512) | 1166 | 92.1 | 7147 | 9 | -- | RHS repeat-associated core domain protein | |||
| > ypw:CH59_2370(1512) | 1166 | 92.1 | 7147 | 8 | -- | RHS repeat-associated core domain protein | |||
| > ypx:YPD8_3232(1512) | 1166 | 92.1 | 7147 | 9 | -- | hypothetical protein | |||
| > ypz:YPZ3_3105(1512) | 1166 | 92.1 | 7147 | 9 | -- | hypothetical protein | |||
| > ypc:BZ23_3215(1520) | 1063 | 98.9 | 7146 | 11 | -- | RHS repeat-associated core domain protein | |||
| > ypb:YPTS_3805(1520) | 1063 | 98.8 | 7137 | 7 | -- | YD repeat protein | |||
| > ypo:BZ17_2985(1520) | 1063 | 98.8 | 7137 | 10 | -- | RHS repeat-associated core domain protein | |||
| > yps:YPTB3615(1520) | 1063 | 98.8 | 7137 | 8 | -- | putative membrane protein | |||
| > ypu:BZ21_2943(1520) | 1063 | 98.8 | 7137 | 9 | -- | RHS repeat-associated core domain protein | |||
| > ypy:YPK_0410(1189) | 1063 | 98.7 | 7129 | 7 | -- | YD repeat protein | |||
| > ypf:BZ19_3080(1527) | 1161 | 92.2 | 7128 | 13 | -- | RHS repeat-associated core domain protein | |||
| > ypi:YpsIP31758_0341(1527) | 1161 | 92.2 | 7128 | 13 | -- | YD/RHS repeat protein | |||
| > ypd:YPD4_3093(1512) | 1166 | 91.6 | 7087 | 9 | -- | hypothetical protein | |||
| > ysi:BF17_05685(1500) | 1063 | 74.6 | 5411 | 9 | -- | hypothetical protein | |||
| > yal:AT01_1864(1509) | 1066 | 64.3 | 4708 | 2 | -- | RHS repeat-associated core domain protein | |||
| > erwi:GN242_06600(1545) | 1192 | 49.7 | 3851 | 20 | -> | hypothetical protein | |||
| > xpo:XPG1_3235(1544) | 1201 | 48.5 | 3802 | 6 | -- | conserved protein of unknown function | |||
| > xbo:XBJ1_0281(1525) | 1189 | 49.6 | 3769 | 9 | -- | Putative membrane protein | |||
| > pakh:B0X70_01635(1527) | 1087 | 51.1 | 3711 | 22 | -- | hypothetical protein | |||
| > rvc:J9880_23440(1418) | 1170 | 48.7 | 3711 | 10 | -- | DUF6531 domain-containing protein | |||
| > plui:CE143_01620(1527) | 1087 | 51.1 | 3710 | 22 | -- | hypothetical protein | |||
| > xbv:XBW1_1180(1530) | 1094 | 51.1 | 3694 | 5 | -- | Putative membrane protein | |||
| > race:JHW33_25420(1423) | 1158 | 48.5 | 3678 | 3 | -- | RHS domain-containing protein | |||
| > xbu:HGO23_01185(1531) | 1070 | 51.2 | 3676 | 4 | -- | RHS repeat protein | |||
| > xgr:QL128_20250(?) | 1078 | 51.3 | 3670 | 0 | -- | - | |||
| > xdo:XDD1_1491(1552) | 1115 | 50.0 | 3669 | 19 | -- | Putative membrane protein | |||
| > plu:plu3120(1498) | 1065 | 50.9 | 3655 | 25 | -- | unnamed protein product; Some similarities with hypothetical protein. RHS protein signature. Putative transmembrane protein | |||
| > plum:A4R40_15595(1498) | 1065 | 50.9 | 3655 | 22 | -- | hypothetical protein | |||
| > sfg:AV650_13880(1546) | 1075 | 50.1 | 3647 | 6 | -- | hypothetical protein | |||
| > pmr:PMI1120(1703) | 1079 | 47.2 | 3426 | 2 | -- | Rhs-family protein | |||
| > xnm:XNC2_1428(1545) | 1115 | 48.0 | 3414 | 17 | -- | Complete genome; segment 11/17 | |||
| > pmag:JI723_13005(1580) | 1178 | 42.8 | 3359 | 3 | -- | RHS repeat protein | |||
| > psta:BGK56_00310(1588) | 1153 | 43.5 | 3350 | 5 | -- | type IV secretion protein Rhs | |||
| > ptha:OI982_05130(?) | 1072 | 45.3 | 3341 | 0 | -- | - | |||
| > psi:S70_18055(1594) | 1083 | 45.7 | 3327 | 10 | -- | Rhs family protein | |||
| > pcol:F1325_14145(1511) | 1111 | 44.0 | 3290 | 2 | -- | DUF4150 domain-containing protein | |||
| > prot:BTA34_12355(1508) | 1170 | 43.0 | 3285 | 4 | -- | hypothetical protein | |||
| > pay:PAU_03014(1279) | 944 | 47.9 | 2998 | 25 | -- | Putative membrane protein | |||
| > bft:MNO13_20470(1399) | 1192 | 40.7 | 2945 | 7 | -- | DUF6531 domain-containing protein | |||
| > lew:DAI21_08465(1456) | 1192 | 41.5 | 2942 | 0 | -- | hypothetical protein | |||
| > buf:D8682_01645(1473) | 1195 | 41.0 | 2924 | 4 | -- | DUF4150 domain-containing protein | |||
| > ptrl:OU419_15255(?) | 1174 | 42.2 | 2919 | 0 | -- | - | |||
| > lya:RDV84_06435(?) | 1174 | 41.7 | 2908 | 0 | -- | - | |||
| > supe:P0H77_18735(1479) | 1128 | 41.6 | 2826 | 12 | -- | DUF4150 domain-containing protein | |||
| > cro:ROD_13591(1477) | 1203 | 40.0 | 2819 | 3 | -- | putative Rhs protein | |||
| > sbv:N643_09065(1543) | 1167 | 39.8 | 2791 | 10 | -- | membrane protein | |||
| > sbg:SBG_1846(1535) | 1135 | 40.3 | 2788 | 5 | -- | Rhs-family protein | |||
| > toe:QMG90_03420(1446) | 1088 | 41.4 | 2777 | 8 | -- | DUF4150 domain-containing protein | |||
| > sbz:A464_2174(1530) | 1196 | 39.4 | 2756 | 11 | -- | hypothetical protein | |||
| > pzh:CX676_10920(1356) | 1073 | 36.7 | 2231 | 5 | -- | hypothetical protein | |||
| > ddc:Dd586_1279(1657) | 1212 | 35.2 | 2229 | 2 | -- | YD repeat protein | |||
| > pami:JCM7686_2967(1611) | 1124 | 35.1 | 2224 | 12 | -- | hypothetical protein | |||
| > dso:A4U42_15895(1660) | 1213 | 34.6 | 2213 | 2 | -- | hypothetical protein | |||
| > paro:CUV01_10170(1527) | 1099 | 35.3 | 2178 | 8 | -- | hypothetical protein | |||
| > palp:JHW40_01745(1581) | 1081 | 34.7 | 2164 | 15 | -- | PAAR/RHS domain-containing protein | |||
| > psap:JHX88_05970(1594) | 1152 | 33.5 | 2091 | 6 | -- | PAAR domain-containing protein | |||
| > paqu:DMB82_0005205(1729) | 1205 | 33.5 | 2045 | 5 | -- | DUF6531 domain-containing protein | |||
| > pcac:OI450_15625(1622) | 1195 | 33.2 | 2032 | 3 | -- | DUF6531 domain-containing protein | |||
| > pacb:M9782_18645(1718) | 1205 | 33.7 | 2027 | 0 | -- | DUF6531 domain-containing protein | |||
| > mmai:sS8_3596(1447) | 1179 | 34.9 | 2009 | 35 | -- | RHS repeat-associated core domain protein | |||
| > bcj:BCAM2253(1515) | 1087 | 35.0 | 2006 | 51 | -- | RHS-family protein | |||
| > bceo:I35_6145(1515) | 1087 | 34.9 | 2004 | 46 | -- | Rhs-family protein | |||
| > bch:Bcen2424_5023(1494) | 1073 | 35.6 | 2003 | 35 | -- | YD repeat protein | |||
| > gma:AciX8_3261(1486) | 1216 | 33.2 | 1996 | 4 | -- | RHS repeat-associated core domain protein | |||
| > rsm:CMR15_mp20245(1475) | 1161 | 34.2 | 1993 | 27 | -- | putative rhs-related transmembrane protein | |||
| > bpsl:WS57_02645(1536) | 1073 | 35.6 | 1977 | 20 | -- | hypothetical protein | |||
| > ppoo:LW347_16420(1766) | 1091 | 34.7 | 1974 | 7 | -- | DUF6531 domain-containing protein | |||
| > pari:I2D83_05600(1758) | 1119 | 34.5 | 1972 | 3 | -- | RHS domain-containing protein | |||
| > rnc:GO999_19750(1521) | 1174 | 34.5 | 1972 | 19 | -- | hypothetical protein | |||
| > rse:F504_4047(1517) | 1140 | 35.0 | 1971 | 17 | -- | Phage tail fiber protein | |||
| > ddd:Dda3937_04312(1658) | 1202 | 33.0 | 1966 | 5 | -- | Putative membrane protein | |||
| > bgd:bgla_1g12200(1496) | 1189 | 33.9 | 1962 | 54 | -- | Rhs-related membrane protein | |||
| > pvz:OA04_34950(1770) | 1139 | 34.0 | 1960 | 7 | -- | rhsC; putative type VI secreted toxin | |||
| > bmul:NP80_4978(1534) | 1071 | 35.2 | 1959 | 25 | -- | RHS repeat-associated core domain protein | |||
| > gbz:JZM60_07255(1459) | 1103 | 34.9 | 1956 | 6 | -- | PAAR domain-containing protein | |||
| > schk:GII14_04930(1638) | 1121 | 32.5 | 1955 | 4 | -- | hypothetical protein | |||
| > bcm:Bcenmc03_5261(1487) | 1071 | 34.7 | 1952 | 38 | -- | YD repeat protein | |||
| > rpu:CDC45_23325(1517) | 1140 | 34.7 | 1952 | 28 | -- | hypothetical protein | |||
| > rso:RSp1137(1517) | 1140 | 34.7 | 1952 | 32 | -- | putative rhs-related transmembrane protein | |||
| > lbq:CKQ53_03110(1674) | 1111 | 33.2 | 1949 | 1 | -- | hypothetical protein | |||
| > dze:Dd1591_2818(1679) | 1172 | 32.8 | 1946 | 9 | -- | YD repeat protein | |||
| > pato:GZ59_34370(1603) | 1181 | 32.8 | 1944 | 5 | -- | Rhs protein | |||
| > patr:EV46_16945(1603) | 1181 | 32.8 | 1944 | 6 | -- | hypothetical protein | |||
| > tcar:U0034_13540(?) | 1136 | 34.5 | 1944 | 0 | -- | - | |||
| > pct:PC1_3233(1639) | 1124 | 33.2 | 1941 | 2 | -- | YD repeat protein | |||
| > bac:BamMC406_4951(1495) | 1107 | 34.4 | 1939 | 44 | -- | YD repeat protein | |||
| > pec:W5S_4434(1776) | 1092 | 33.8 | 1939 | 28 | -- | Substrate-binding repeat protein | |||
| > pqu:IG609_004570(1767) | 1119 | 33.8 | 1936 | 6 | -- | RHS domain-containing protein | |||
| > pcc:PCC21_032190(1597) | 1089 | 33.7 | 1934 | 6 | -- | YD repeat-containing protein | |||