KEGG   PATHWAY: ajm03050
Entry
ajm03050                    Pathway                                
Name
Proteasome - Artibeus jamaicensis (Jamaican fruit-eating bat)
Description
The proteasome is a protein-destroying apparatus involved in many essential cellular functions, such as regulation of cell cycle, cell differentiation, signal transduction pathways, antigen processing for appropriate immune responses, stress signaling, inflammatory responses, and apoptosis. It is capable of degrading a variety of cellular proteins in a rapid and timely fashion and most substrate proteins are modified by ubiquitin before their degradation by the proteasome. The proteasome is a large protein complex consisting of a proteolytic core called the 20S particle and ancillary factors that regulate its activity in various ways. The most common form is the 26S proteasome containing one 20S core particle and two 19S regulatory particles that enable the proteasome to degrade ubiquitinated proteins by an ATP-dependent mechanism. Another form is the immunoproteasome containing two 11S regulatory particles, PA28 alpha and PA28 beta, which are induced by interferon gamma under the conditions of intensified immune response. Other regulatory particles include PA28 gamma and PA200. Although PA28 gamma also belongs to a family of activators of the 20S proteasome, it is localized within the nucleus and forms a homoheptamer. PA28 gamma has been implicated in the regulation of cell cycle progression and apoptosis. PA200 has been identified as a large nuclear protein that stimulates proteasomal hydrolysis of peptides.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
ajm03050  Proteasome
ajm03050

Other DBs
GO: 0000502
Organism
Artibeus jamaicensis (Jamaican fruit-eating bat) [GN:ajm]
Gene
119045752  PSMD3; 26S proteasome non-ATPase regulatory subunit 3 [KO:K03033]
119060767  PSMD9; 26S proteasome non-ATPase regulatory subunit 9 [KO:K06693]
119036277  PSMD12; 26S proteasome non-ATPase regulatory subunit 12 [KO:K03035]
119047838  PSMD11; 26S proteasome non-ATPase regulatory subunit 11 [KO:K03036]
119042405  PSMD6; 26S proteasome non-ATPase regulatory subunit 6 [KO:K03037]
119061931  PSMD7; 26S proteasome non-ATPase regulatory subunit 7 [KO:K03038]
119057991  26S proteasome non-ATPase regulatory subunit 7 homolog A [KO:K03038]
119060970  PSMD13; 26S proteasome non-ATPase regulatory subunit 13 [KO:K03039]
119045645  PSMD14; 26S proteasome non-ATPase regulatory subunit 14 isoform X1 [KO:K03030]
119057823  26S proteasome non-ATPase regulatory subunit 14 homolog [KO:K03030]
119046729  PSMD8; 26S proteasome non-ATPase regulatory subunit 8 [KO:K03031]
119042895  SEM1; 26S proteasome complex subunit SEM1 [KO:K10881]
119062394  26S proteasome complex subunit SEM1-like [KO:K10881]
119035018  PSMD4; 26S proteasome non-ATPase regulatory subunit 4 isoform X1 [KO:K03029]
119056444  PSMD2; 26S proteasome non-ATPase regulatory subunit 2 [KO:K03028]
119054299  PSMD1; 26S proteasome non-ATPase regulatory subunit 1 [KO:K03032]
119055367  ADRM1; proteasomal ubiquitin receptor ADRM1 [KO:K06691]
119065618  PSMC2; 26S proteasome regulatory subunit 7 [KO:K03061]
119037883  PSMC1; 26S proteasome regulatory subunit 4 [KO:K03062]
119053912  26S proteasome regulatory subunit 4 homolog A [KO:K03062]
119036290  PSMC5; 26S proteasome regulatory subunit 8 [KO:K03066]
119056989  PSMC6; 26S proteasome regulatory subunit 10B [KO:K03064]
119064475  PSMC3; 26S proteasome regulatory subunit 6A [KO:K03065]
119040442  PSMC4; 26S proteasome regulatory subunit 6B [KO:K03063]
119042328  26S proteasome regulatory subunit 6B homolog [KO:K03063]
119037298  PSME1; proteasome activator complex subunit 1 isoform X1 [KO:K06696]
119037321  PSME2; proteasome activator complex subunit 2 isoform X1 [KO:K06697]
119051831  PSME3; proteasome activator complex subunit 3 [KO:K06698]
119058941  PSME4; proteasome activator complex subunit 4 isoform X1 [KO:K06699]
119038778  proteasome subunit alpha type-6 [KO:K02730] [EC:3.4.25.1]
119039405  LOW QUALITY PROTEIN: proteasome subunit alpha type-6-like [KO:K02730] [EC:3.4.25.1]
119040241  LOW QUALITY PROTEIN: proteasome subunit alpha type-6-like [KO:K02730] [EC:3.4.25.1]
119042355  PSMA6; proteasome subunit alpha type-6 [KO:K02730] [EC:3.4.25.1]
119034617  PSMA2; proteasome subunit alpha type-2 [KO:K02726] [EC:3.4.25.1]
119051999  proteasome subunit alpha type-4-1 [KO:K02728] [EC:3.4.25.1]
119057256  PSMA4; proteasome subunit alpha type-4 [KO:K02728] [EC:3.4.25.1]
119036180  PSMA8; proteasome subunit alpha-type 8 [KO:K02731] [EC:3.4.25.1]
119039310  proteasome subunit alpha type-4-like [KO:K02731] [EC:3.4.25.1]
119055344  PSMA7; proteasome subunit alpha type-7 [KO:K02731] [EC:3.4.25.1]
119052774  proteasome subunit alpha type-5 [KO:K02729] [EC:3.4.25.1]
119054563  PSMA5; proteasome subunit alpha type-5 [KO:K02729] [EC:3.4.25.1]
119053088  PSMA1; proteasome subunit alpha type-1 [KO:K02725] [EC:3.4.25.1]
119046747  proteasome subunit alpha type-1 [KO:K02725] [EC:3.4.25.1]
119045120  PSMA3; proteasome subunit alpha type-3 [KO:K02727] [EC:3.4.25.1]
119043212  PSMB6; proteasome subunit beta type-6 [KO:K02738] [EC:3.4.25.1]
119038244  proteasome subunit beta type-6-like [KO:K02738] [EC:3.4.25.1]
119038245  proteasome subunit beta type-6-like [KO:K02738] [EC:3.4.25.1]
119056326  proteasome subunit beta type-6-like [KO:K02738] [EC:3.4.25.1]
119062599  PSMB7; proteasome subunit beta type-7 [KO:K02739] [EC:3.4.25.1]
119045787  PSMB3; proteasome subunit beta type-3 [KO:K02735] [EC:3.4.25.1]
119052383  PSMB2; proteasome subunit beta type-2 [KO:K02734] [EC:3.4.25.1]
119035962  proteasome subunit beta type-5-A-like [KO:K02737] [EC:3.4.25.1]
119037312  PSMB5; proteasome subunit beta type-5 [KO:K02737] [EC:3.4.25.1]
119034917  PSMB1; proteasome subunit beta type-1 [KO:K02732] [EC:3.4.25.1]
119058600  proteasome subunit beta type-1 [KO:K02732] [EC:3.4.25.1]
119058606  proteasome subunit beta type-1-like [KO:K02732] [EC:3.4.25.1]
119054642  proteasome subunit beta type-7-like [KO:K02736] [EC:3.4.25.1]
119048111  PSMB4; proteasome subunit beta type-4 [KO:K02736] [EC:3.4.25.1]
119049936  PSMB9; proteasome subunit beta type-9 [KO:K02741] [EC:3.4.25.1]
119061881  PSMB10; proteasome subunit beta type-10 [KO:K02733] [EC:3.4.25.1]
119049934  PSMB8; proteasome subunit beta type-8 [KO:K02740] [EC:3.4.25.1]
119037238  PSMB11; proteasome subunit beta type-11 [KO:K11598] [EC:3.4.25.1]
119042309  IFNG; interferon gamma [KO:K04687]
119047699  PSMF1; proteasome inhibitor PI31 subunit isoform X1 [KO:K06700]
119043170  LOW QUALITY PROTEIN: proteasome maturation protein-like [KO:K11599]
119048372  proteasome maturation protein-like [KO:K11599]
119056675  proteasome maturation protein-like [KO:K11599]
119064955  proteasome maturation protein [KO:K11599]
Reference
  Authors
Hirano Y, Murata S, Tanaka K
  Title
Large- and small-scale purification of mammalian 26S proteasomes.
  Journal
Methods Enzymol 399:227-40 (2005)
DOI:10.1016/S0076-6879(05)99015-0
Reference
  Authors
Saeki Y, Tanaka K
  Title
Cell biology: two hands for degradation.
  Journal
Nature 453:460-1 (2008)
DOI:10.1038/453460a
Reference
  Authors
Smith DM, Benaroudj N, Goldberg A
  Title
Proteasomes and their associated ATPases: a destructive combination.
  Journal
J Struct Biol 156:72-83 (2006)
DOI:10.1016/j.jsb.2006.04.012
Reference
  Authors
Strehl B, Seifert U, Kruger E, Heink S, Kuckelkorn U, Kloetzel PM
  Title
Interferon-gamma, the functional plasticity of the ubiquitin-proteasome system, and MHC class I antigen processing.
  Journal
Immunol Rev 207:19-30 (2005)
DOI:10.1111/j.0105-2896.2005.00308.x
Reference
  Authors
Darwin KH
  Title
Prokaryotic ubiquitin-like protein (Pup), proteasomes and pathogenesis.
  Journal
Nat Rev Microbiol 7:485-91 (2009)
DOI:10.1038/nrmicro2148
Reference
  Authors
Tomko RJ Jr, Hochstrasser M
  Title
Molecular architecture and assembly of the eukaryotic proteasome.
  Journal
Annu Rev Biochem 82:415-45 (2013)
DOI:10.1146/annurev-biochem-060410-150257
Reference
  Authors
Budenholzer L, Cheng CL, Li Y, Hochstrasser M
  Title
Proteasome Structure and Assembly.
  Journal
J Mol Biol 429:3500-3524 (2017)
DOI:10.1016/j.jmb.2017.05.027
Reference
  Authors
Cloos J, Roeten MS, Franke NE, van Meerloo J, Zweegman S, Kaspers GJ, Jansen G
  Title
(Immuno)proteasomes as therapeutic target in acute leukemia.
  Journal
Cancer Metastasis Rev 36:599-615 (2017)
DOI:10.1007/s10555-017-9699-4
Reference
  Authors
Sakata E, Bohn S, Mihalache O, Kiss P, Beck F, Nagy I, Nickell S, Tanaka K, Saeki Y, Forster F, Baumeister W
  Title
Localization of the proteasomal ubiquitin receptors Rpn10 and Rpn13 by electron cryomicroscopy.
  Journal
Proc Natl Acad Sci U S A 109:1479-84 (2012)
DOI:10.1073/pnas.1119394109
Related
pathway
ajm04120  Ubiquitin mediated proteolysis
KO pathway
ko03050   
LinkDB

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