KEGG   PATHWAY: arp00195
Entry
arp00195                    Pathway                                
Name
Photosynthesis - Arthrospira platensis
Description
Photosynthesis in green plants and specialized bacteria is the process of utilizing light energy to synthesize organic compounds from carbon dioxide and water. It consists of the light dependent part (light reaction) and the light independent part (dark reaction, carbon fixation). The light reaction takes place in thylakoid, a membrane-bound compartment inside chloroplasts and cyanobacteria. The light energy is used by photosystems I and II to generate proton motive force and reducing power (NADPH or NADH). The proton motive force is used by ATP synthase to generate ATP, essentially in the same way as the mitochondrial respiratory chain. The supplies of ATP and NAD(P)H are then used to fix carbon dioxide.
Class
Metabolism; Energy metabolism
Pathway map
arp00195  Photosynthesis
arp00195

Module
arp_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:arp00195]
arp_M00161  Photosystem II [PATH:arp00195]
arp_M00163  Photosystem I [PATH:arp00195]
Organism
Arthrospira platensis [GN:arp]
Gene
NIES39_K03030  psbAIV; photosystem II reaction center D1 protein [KO:K02703] [EC:1.10.3.9]
NIES39_K03080  psbAIII; photosystem II reaction center D1 protein [KO:K02703] [EC:1.10.3.9]
NIES39_O04720  psbA1; photosystem II reaction center D1 protein [KO:K02703] [EC:1.10.3.9]
NIES39_Q03010  psbAV; photosystem II reaction center D1 protein [KO:K02703] [EC:1.10.3.9]
NIES39_R00140  psbAII; photosystem II reaction center D1 protein [KO:K02703] [EC:1.10.3.9]
NIES39_Q02360  psbB; photosystem II CP47 protein [KO:K02704]
NIES39_H00660  psbC; photosystem II CP43 protein [KO:K02705]
NIES39_H00650  psbD1; photosystem II reaction center D2 protein [KO:K02706] [EC:1.10.3.9]
NIES39_D03780  psbDII; photosystem II reaction center D2 protein [KO:K02706] [EC:1.10.3.9]
NIES39_A08090  psbE; photosystem II cytochrome b559 alpha subunit [KO:K02707]
NIES39_A08080  cytochrome b559 beta subunit [KO:K02708]
NIES39_J03950  psbH; photosystem II PsbH protein, PSII-H [KO:K02709]
NIES39_N00010  psbI; photosystem II reaction center PsbI protein [KO:K02710]
NIES39_A08060  psbJ; photosystem II PsbJ protein [KO:K02711]
NIES39_Q02940  psbK; photosystem II PsbK protein, PSII-K [KO:K02712]
NIES39_A08070  psbL; photosystem II PsbL protein [KO:K02713]
NIES39_J00040  psbM; photosystem II PsbM protein, PSII-M [KO:K02714]
NIES39_O06150  psbO; photosystem II manganese-stabilizing protein precursor [KO:K02716]
NIES39_E01320  psbP2; photosystem II oxygen-evolving complex protein PsbP [KO:K02717]
NIES39_Q02350  psbTc; photosystem II PsbTc protein [KO:K02718]
NIES39_B00960  psbU; photosystem II 12 kD extrinsic protein [KO:K02719]
NIES39_J05860  psbV2; cytochrome c550 like protein [KO:K02720]
NIES39_J05870  psbV1; cytochrome c550 [KO:K02720]
NIES39_O03300  psbX; photosystem II PsbX protein, PSII-X [KO:K02722]
NIES39_A02930  psbY; photosystem II protein PsbY [KO:K02723]
NIES39_D03920  psbZ; photosystem II PsbZ protein, PSII-Z [KO:K02724]
NIES39_J01230  psb27; photosystem II 11 kD protein [KO:K08902]
NIES39_D07260  psb28; photosystem II Psb28 protein [KO:K08903]
NIES39_A01290  psb28; photosystem II Psb28-2 protein [KO:K08904]
NIES39_D05970  psaA; photosystem I reaction center subunit Ia [KO:K02689] [EC:1.97.1.12]
NIES39_D05980  psaB; photosystem I reaction center subunit Ib [KO:K02690] [EC:1.97.1.12]
NIES39_Q02290  psaC; photosystem I iron-sulfur protein PsaC [KO:K02691] [EC:1.97.1.12]
NIES39_G00250  psaD; photosystem I reaction center subunit II [KO:K02692]
NIES39_M01060  psaE; photosystem I reaction center subunit IV [KO:K02693]
NIES39_C00620  psaF; photosystem I reaction center subunit III, plastocyanin docking protein [KO:K02694]
NIES39_K00580  psaI; photosystem I subunit VIII [KO:K02696]
NIES39_C00610  psaJ; photosystem I reaction center subunit IV [KO:K02697]
NIES39_J00550  psaK2; photosystem I reaction center subunit X [KO:K02698]
NIES39_K00650  psaK1; photosystem I reaction center subunit X [KO:K02698]
NIES39_K00590  psaL; photosystem I reaction center subunit XI [KO:K02699]
NIES39_A03290  psaM; photosystem I reaction center subunit XII [KO:K02700]
NIES39_O05440  psaX; photosystem I PsaX protein [KO:K02702]
NIES39_L01880  petA; apocytochrome f [KO:K02634]
NIES39_M02420  petB; cytochrome b6 [KO:K02635]
NIES39_L01870  petC; cytochrome b6-f complex iron-sulfur subunit [KO:K02636] [EC:7.1.1.6]
NIES39_M02410  petD; cytochrome b6-f complex subunit IV [KO:K02637]
NIES39_L02800  petG; cytochrome b6-f complex subunit 5 [KO:K02640]
NIES39_O05270  petM; cytochrome b6-f complex subunit PetM [KO:K02643]
NIES39_A02580  petN_ycf6; cytochrome b6-f complex subunit VIII [KO:K03689]
NIES39_B00120  petF; 2Fe-2S ferredoxin I [KO:K02639]
NIES39_Q00700  2Fe-2S ferredoxin [KO:K02639]
NIES39_E01650  2Fe-2S ferredoxin [KO:K02639]
NIES39_L02790  petH; ferredoxin--NADP+ oxidoreductase [KO:K02641] [EC:1.18.1.2]
NIES39_O04350  petJ; cytochrome c6 [KO:K08906]
NIES39_C03460  petJ; cytochrome c6 [KO:K08906]
NIES39_H00700  atpE; ATP synthase epsilon chain [KO:K02114]
NIES39_H00710  atpB; ATP synthase beta chain [KO:K02112] [EC:7.1.2.2 7.2.2.1]
NIES39_A08240  atpC; ATP synthase gamma chain [KO:K02115]
NIES39_A08250  atpA; ATP synthase alpha chain [KO:K02111] [EC:7.1.2.2 7.2.2.1]
NIES39_A08260  atpD; ATP synthase delta chain [KO:K02113]
NIES39_A08270  atpF; ATP synthase b chain [KO:K02109]
NIES39_A08280  atpG; ATP synthase b' chain [KO:K02109]
NIES39_A08290  atpH; ATP synthase c chain [KO:K02110]
NIES39_A08300  atpI; ATP synthase a chain [KO:K02108]
Compound
C00001  H2O
C00002  ATP
C00005  NADPH
C00006  NADP+
C00007  Oxygen
C00008  ADP
C00009  Orthophosphate
C00034  Manganese
C00080  H+
C02061  Plastoquinone
C16693  Plastoquinol
Reference
  Authors
Ferreira KN, Iverson TM, Maghlaoui K, Barber J, Iwata S.
  Title
Architecture of the photosynthetic oxygen-evolving center.
  Journal
Science 303:1831-8 (2004)
DOI:10.1126/science.1093087
Reference
  Authors
Kamiya N, Shen JR.
  Title
Crystal structure of oxygen-evolving photosystem II from Thermosynechococcus vulcanus at 3.7-A resolution.
  Journal
Proc Natl Acad Sci U S A 100:98-103 (2003)
DOI:10.1073/pnas.0135651100
Reference
  Authors
Zouni A, Witt HT, Kern J, Fromme P, Krauss N, Saenger W, Orth P.
  Title
Crystal structure of photosystem II from Synechococcus elongatus at 3.8 A resolution.
  Journal
Nature 409:739-743 (2001)
DOI:10.1038/35055589
Reference
  Authors
Jordan P, Fromme P, Witt HT, Klukas O, Saenger W, Krauss N.
  Title
Three-dimensional structure of cyanobacterial photosystem I at 2.5 A resolution.
  Journal
Nature 411:909-917 (2001)
DOI:10.1038/35082000
Reference
  Authors
Jones MR, Fyfe PK.
  Title
Photosynthesis: new light on biological oxygen production.
  Journal
Curr Biol 17:R318-R321 (2001)
DOI:10.1016/S0960-9822(01)00174-9
Reference
  Authors
Shen G, Zhao J, Reimer SK, Antonkine ML, Cai Q, Weiland SM, Golbeck JH, Bryant DA.
  Title
Assembly of photosystem I. I. Inactivation of the rubA gene encoding a membrane-associated rubredoxin in the cyanobacterium Synechococcus sp. PCC 7002 causes a loss of photosystem I activity.
  Journal
J Biol Chem 277:20343-54 (2002)
DOI:10.1074/jbc.M201103200
Related
pathway
arp00196  Photosynthesis - antenna proteins
arp00710  Carbon fixation by Calvin cycle
KO pathway
ko00195   
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