KEGG   PATHWAY: cda00240
Entry
cda00240                    Pathway                                
Name
Pyrimidine metabolism - Corynebacterium diphtheriae HC04
Class
Metabolism; Nucleotide metabolism
Pathway map
cda00240  Pyrimidine metabolism
cda00240

Module
cda_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:cda00240]
cda_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:cda00240]
Other DBs
GO: 0006220 0006213
Organism
Corynebacterium diphtheriae HC04 [GN:cda]
Gene
CDHC04_0371  [KO:K21636] [EC:1.1.98.6]
CDHC04_0549  upp; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
CDHC04_0560  maf; Maf-like protein [KO:K06287] [EC:3.6.1.-]
CDHC04_0597  tmk; thymidylate kinase [KO:K00943] [EC:2.7.4.9]
CDHC04_0746  thyA; thymidylate synthase [KO:K00560] [EC:2.1.1.45]
CDHC04_1110  cmk; cytidylate kinase [KO:K00945] [EC:2.7.4.25]
CDHC04_1177  pyrD; dihydroorotate dehydrogenase 2 [KO:K00254] [EC:1.3.5.2]
CDHC04_1240  pyrF; orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
CDHC04_1241  carB; carbamoyl phosphate synthase large subunit [KO:K01955] [EC:6.3.5.5]
CDHC04_1242  carA; carbamoyl phosphate synthase small subunit [KO:K01956] [EC:6.3.5.5]
CDHC04_1243  pyrC; dihydroorotase [KO:K01465] [EC:3.5.2.3]
CDHC04_1244  pyrB; aspartate carbamoyltransferase catalytic subunit [KO:K00609] [EC:2.1.3.2]
CDHC04_1245  pyrR; pyrimidine regulatory protein [KO:K02825] [EC:2.4.2.9]
CDHC04_1322  dut2; deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
CDHC04_1386  thyX2; FAD-dependent thymidylate synthase [KO:K03465] [EC:2.1.1.148]
CDHC04_1427  pyrH; uridylate kinase [KO:K09903] [EC:2.7.4.22]
CDHC04_1591  [KO:K02566] [EC:3.1.3.5]
CDHC04_1650  iunH; inosine-uridine preferring nucleoside hydrolase [KO:K25589]
CDHC04_1676  ndk; nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
CDHC04_1752  nrdF1; ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
CDHC04_1755  nrdE; ribonucleotide-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
CDHC04_1809  nrdF2; ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
CDHC04_2022  pyrE; orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
CDHC04_2066  dcd; deoxycytidine triphosphate deaminase [KO:K01494] [EC:3.5.4.13]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
cda00030  Pentose phosphate pathway
cda00220  Arginine biosynthesis
cda00250  Alanine, aspartate and glutamate metabolism
cda00280  Valine, leucine and isoleucine degradation
KO pathway
ko00240   

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