Chondrinema litorale: OQ292_04650
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Entry
OQ292_04650 CDS
T09098
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
clit
Chondrinema litorale
Pathway
clit01501
beta-Lactam resistance
clit01503
Cationic antimicrobial peptide (CAMP) resistance
clit02020
Two-component system
clit03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
OQ292_04650
09132 Signal transduction
02020 Two-component system
OQ292_04650
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OQ292_04650
01503 Cationic antimicrobial peptide (CAMP) resistance
OQ292_04650
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clit02000
]
OQ292_04650
02044 Secretion system [BR:
clit02044
]
OQ292_04650
01504 Antimicrobial resistance genes [BR:
clit01504
]
OQ292_04650
Transporters [BR:
clit02000
]
Other transporters
Pores ion channels [TC:
1
]
OQ292_04650
Secretion system [BR:
clit02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
OQ292_04650
RTX toxin transporter
OQ292_04650
Multiple protein transporter
OQ292_04650
RaxAB-RaxC type I secretion system protein
OQ292_04650
Antimicrobial resistance genes [BR:
clit01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
OQ292_04650
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
OQ292_04650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
UZR95105
LinkDB
All DBs
Position
complement(1141739..1143109)
Genome browser
AA seq
456 aa
AA seq
DB search
MYLNTIRNGILLFCLLLTHLTFSQDNDNSTAYSLEECVTFALQNAVAIKNAYIDMQSADA
SVNEIRADGLPQITGQVQFIDNYNLQKTLLPENFFDPEGSESVLVPVQLGVRFSGNVGVT
LNQLIFDGTFFLGLKAAKTYKELAQKNMERSKIETVEAVTKAYYNALISEERLKLAEENY
NRLDTLLRQTTAMFENGFSEKIDVDRIRVNMNNVKSQLANIEQMNQVSLILLKFQMGMKV
SDPITLEGKISDVKDEFLQIDGREDINYNNRIEYSINQTQIELDKLNIKRYNVGYLPSLY
AFAGIGANSGAQEISNLMNFGDYWFSNGNYGFTLSIPIFDGLRKKYQIEQARLTLLKSEN
NSWNIENMIETELAQAQIALESNITILNSERDNMELADEIYRVSNIKYQEGVGSSFELVD
AETSLTQAQTNYYNALYNALIAKIDYLKAIGELGSE
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtatctaaacacaattagaaatgggatattacttttttgtctgctgttaacccattta
acgttttcgcaagacaatgataatagtactgcttactcactggaagagtgtgtgacgttt
gccctccaaaatgcagttgctattaaaaatgcatacatagatatgcaatctgcagatgca
agtgtaaatgagatacgagcagatggcttacctcaaattacaggtcaagttcagtttatt
gataattataatttacagaaaacattactgccagaaaacttctttgatcctgaaggatca
gagtctgtattagtgcctgtacaattgggagtgagatttagtggaaatgttggtgtaaca
cttaatcaactaatttttgatggtactttttttctaggtttaaaagctgctaaaacctat
aaagagttagcacaaaaaaacatggaaagatcaaaaattgaaacagttgaggcggttaca
aaagcatattataatgcgcttattagcgaagagcgattaaaattagctgaggaaaattat
aacagattagatacactgttgaggcaaactactgcgatgtttgagaatggtttttctgaa
aaaatcgatgtggacaggataagggtgaatatgaataatgtaaaatcacagcttgcaaac
attgaacagatgaatcaggtaagtttgatccttttaaagtttcaaatggggatgaaagta
tctgaccctattactcttgaaggtaaaattagtgatgtgaaagacgaatttctccaaatt
gatggaagagaagatattaattataataacagaattgaatactcaattaatcaaacacag
atcgagctagataagcttaatataaagagatataatgtaggctatttgccatcactttat
gcatttgcaggaattggtgctaattctggagcacaagagataagtaatttaatgaatttt
ggtgattactggtttagtaatggaaattatggtttcaccctaagtattccaatatttgat
ggactcagaaaaaaatatcaaatcgagcaagcacgccttactctattaaagtcagaaaat
aatagttggaatattgaaaatatgattgagacagagttagcacaggctcaaatagcttta
gaaagtaatataactattcttaatagtgaaagagataatatggagttggctgatgaaatt
tatagggtgtcaaatatcaaatatcaagaaggtgttggttcgagtttcgaattggtagat
gctgaaacatcgcttactcaggcgcaaacaaattactacaatgcgctttacaatgcacta
attgcaaagattgattacctaaaagctataggtgagttaggcagtgaataa
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