Chondrinema litorale: OQ292_15050
Help
Entry
OQ292_15050 CDS
T09098
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
clit
Chondrinema litorale
Pathway
clit01501
beta-Lactam resistance
clit02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OQ292_15050
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OQ292_15050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clit02000
]
OQ292_15050
01504 Antimicrobial resistance genes [BR:
clit01504
]
OQ292_15050
Transporters [BR:
clit02000
]
Other transporters
Pores ion channels [TC:
1
]
OQ292_15050
Antimicrobial resistance genes [BR:
clit01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OQ292_15050
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
OQ292_15050
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
OQ292_15050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
HEPN_SAV2148
Motif
Other DBs
NCBI-ProteinID:
UZR93176
LinkDB
All DBs
Position
3644110..3645537
Genome browser
AA seq
475 aa
AA seq
DB search
MKKLKIYQLAIPVVVSFLVQSCFVAKNYQKPELSTENLYRTDLDLDSNSLASMSWDKLFT
DPVLQGYIRSGLENNYDMLIALQTLKAAESNMLQGKESYLPTLDIGPTWTHQTYSQNSQF
GRLFTGSLDQFELTANASWEADIWGKIRSTKRSAIAAYLGTVAAQQAIQTELVANIASIY
YQILAADAQLKVAESTLENRVSSVEVIHSLKESGSVNEVAVKQTEAQQYGTEIIIQDLKY
NIKILENTLSILLGEAPGEINRGSFEAQTIDAEVTPGVPALLLSRRPDVVSAEFNFRQAF
ENTNIAKSNFYPSLTISASVGLQSLELRNWFSANSIFSTLITGITQPILNKRQIRTNYEV
AQANQQTAYLQYEQTLLNAGKEVSDALATYKNETEKLIIRNNQLEALKNAADYSDELLQY
GLVNYLEVLTAKDSALNTELDLISNKYNQLNAVITLYRSLGGGYQPLPVLTTEEN
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactaaaaatatatcaattagcgattccggtggtggttagttttctggtgcaa
tcttgttttgtggcaaaaaactatcagaaaccggagttaagtaccgagaacttgtaccgc
acagatttagacctagatagtaattctttggcttctatgtcgtgggacaagctttttaca
gaccctgttttacaaggttatattcgtagtggtttagagaataattacgatatgcttatc
gcattgcaaactctaaaagccgctgaatctaatatgttgcaaggtaaagagtcttatttg
ccaactttagatataggcccaacttggacacaccagacttattcacaaaacagtcagttt
ggtaggttatttactggttctttagatcagtttgaattaacagcaaatgcttcgtgggag
gctgatatttggggtaaaattagaagtacaaaacgttcggctatagctgcttatttaggt
acagtggcagcccaacaagctattcaaactgaattggttgctaacatagcttcaatttac
tatcagattttggcggctgatgcacagcttaaagtagctgaatctacattagaaaacaga
gtttcaagtgttgaagtaattcattctcttaaagagtctggtagtgtaaatgaggtagct
gtaaagcaaacagaagcacagcaatacggtacagagattattattcaagacttaaagtac
aatatcaaaattcttgaaaatacattaagtatcttattgggcgaagctccaggtgaaata
aacagaggaagctttgaggcacaaactattgatgcagaggttacccccggagtgcctgct
ttattgctaagtcgcagaccagatgtagtaagtgccgagtttaattttagacaagctttt
gaaaataccaatattgcaaagagtaatttctatccatcgcttactatttcagcttctgtt
ggtttgcaaagtttagaactcagaaactggtttagtgccaactctatcttttctacttta
ataacaggtattactcaaccaattctaaacaaaagacagataagaacaaactacgaagtt
gctcaggctaatcagcaaacagcttatttacaatatgagcaaacattgttaaatgcaggc
aaggaagtgtctgatgctttggcgacttataaaaacgaaacagaaaaactaataataaga
aacaatcaactcgaagcattaaaaaatgctgctgattactcagatgagttactccaatat
ggtttggtaaactatttggaagtacttacagcaaaagatagtgcattaaataccgagtta
gatttaataagtaataaatacaaccagctaaatgcggtaattacattgtaccgctcattg
ggtggtggttaccaacctcttcccgtattaacaacagaagaaaactaa
DBGET
integrated database retrieval system
