Chondrinema litorale: OQ292_22345
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Entry
OQ292_22345 CDS
T09098
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
clit
Chondrinema litorale
Pathway
clit01501
beta-Lactam resistance
clit01503
Cationic antimicrobial peptide (CAMP) resistance
clit02020
Two-component system
clit03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
OQ292_22345
09132 Signal transduction
02020 Two-component system
OQ292_22345
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OQ292_22345
01503 Cationic antimicrobial peptide (CAMP) resistance
OQ292_22345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clit02000
]
OQ292_22345
02044 Secretion system [BR:
clit02044
]
OQ292_22345
01504 Antimicrobial resistance genes [BR:
clit01504
]
OQ292_22345
Transporters [BR:
clit02000
]
Other transporters
Pores ion channels [TC:
1
]
OQ292_22345
Secretion system [BR:
clit02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
OQ292_22345
RTX toxin transporter
OQ292_22345
Multiple protein transporter
OQ292_22345
RaxAB-RaxC type I secretion system protein
OQ292_22345
Antimicrobial resistance genes [BR:
clit01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
OQ292_22345
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
OQ292_22345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
UZR96400
LinkDB
All DBs
Position
unnamed2:complement(487234..488559)
Genome browser
AA seq
441 aa
AA seq
DB search
MRYFILILFIGCIASANAQTGFTLSECIDYTLNNHPTLSVYENNRSIAKAQSSQSVASYL
PQVTGSANFTDNLKLQTTILPAGTFGPEPAEVQLGTQFNTVVGVDFSQTIYDQSKITGIK
AGKPYEAMTKYQEELNKEVITYNTAKAYFQVLTFKEQLSLLYSNQEKYEEMLSVLQYQFE
KGVVLQKDVDRAKVNLNSINYQIEDATTKEQLALNTLKNTMGMPLDSTLLVQEAIDYELF
ATADMHNDLSLERLTEVQINKKQIELQEINLQMQKAKFSPTLDFVGKYGSQALSQDFDDA
FSDWRSFSYVGISLKLPLFTGFKRSSQVKEEKLNLENELTNFEINKRDLKLRFENAQTSV
GTAYSSFQSNRDNMQLSKKLLDVTEYQYQQGVASLTDYLNDDTAYKTAQTNYINSLYNLM
VTQLDYQKSQGSLLQFINTIK
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaggtattttattttaatattatttattggatgcatagcaagtgcaaatgcacaaacg
ggtttcacactgagtgagtgtattgattataccctgaataatcatccgacactttcagtc
tatgaaaacaacaggtctattgccaaagcacaatctagccaaagtgtagctagctatttg
ccacaagttacaggctcagccaattttactgataacctaaaattgcaaacgactatttta
cccgcaggaacttttggcccagagccagcagaagtacaattaggtactcagtttaatact
gtagtaggtgtagattttagccaaacaatttacgatcaatcgaagattactggtattaag
gcaggtaagccttacgaagcgatgaccaagtatcaggaagagctcaacaaagaagtaatc
acttataatacagccaaagcgtattttcaggtgcttacttttaaagagcaacttagttta
ctgtatagcaatcaggaaaagtacgaggagatgctttcggtactccaatatcaatttgaa
aagggagtagttttacaaaaagatgtagatcgagccaaggtaaatctcaattcaatcaat
taccaaattgaagatgcaaccaccaaagaacaattggcacttaataccctaaaaaataca
atgggtatgccattagatagcacattgttagtacaagaagctattgattatgagctgttt
gccacagcagatatgcataatgatttatctctggagagactgacagaagttcaaataaat
aaaaagcaaattgaacttcaagagataaatctgcaaatgcagaaagccaagtttagtcct
actttagactttgtaggcaaatatggttcgcaagctttaagtcaagattttgatgatgca
ttttcagactggaggagcttctcttatgtaggtatttcacttaaactgccattattcaca
ggatttaaacgtagtagtcaggtaaaagaagaaaagttaaatctagaaaacgaactcacc
aatttcgagatcaacaagagagatttaaagttacgcttcgaaaatgctcaaacatctgta
ggtacagcttatagttctttccagagcaatagagacaatatgcaattgtctaaaaaatta
ctcgatgttacagaatatcaatatcaacagggagtggctagtttaacagactacctcaac
gatgatactgcctacaaaacagctcagacaaattatataaacagcctttacaacttaatg
gtaactcagttggattaccaaaaatctcaaggctcactattgcaatttataaacactatt
aaataa
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