Chondrinema litorale: OQ292_24445
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Entry
OQ292_24445 CDS
T09098
Name
(GenBank) TolC family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
clit
Chondrinema litorale
Pathway
clit01501
beta-Lactam resistance
clit02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OQ292_24445
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OQ292_24445
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clit02000
]
OQ292_24445
01504 Antimicrobial resistance genes [BR:
clit01504
]
OQ292_24445
Transporters [BR:
clit02000
]
Other transporters
Pores ion channels [TC:
1
]
OQ292_24445
Antimicrobial resistance genes [BR:
clit01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OQ292_24445
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
OQ292_24445
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
OQ292_24445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
UZR96850
LinkDB
All DBs
Position
unnamed3:complement(380659..382074)
Genome browser
AA seq
471 aa
AA seq
DB search
MKRFNLSIYIIAGFLLFFVSCRVTKDYQSPNINSKEYLRVNKDHSIDTLAEVPQIPWKSF
FTDTLLQNYIEAALVENYDMKIAFERIEIAEAIHHQSKQAFLPNISGNVSVARSKLAFTQ
GFGIIDDVTQYDLGLSVSWEADIWGKLKSANKAQLARLLQSKAYQHAVQAALITNIASQY
YQLIALDEQLNILQRTAENRKANVTSIQKLQTANVVNSVAVLQSQANQYDAEIAIFNVEK
QIWEVENALAVLLGKSTAKIERTRFDEINDKSPLPVFESINAELMANRPDVIQAELAYRS
AFELTNVARTQFYPSFTLTGAGGFSSFEFSDLFTENIGLFGNVAAGLFQPIFNKGINEAN
LKTAKSEQQIAFYNFEYTLLKAGQEISDAYNSFQKANLKIEKRVLQLEALSKSVDDTKKL
LQYNSQTNYTDVLTSEQNLLAAEIGNVNDILEQKIALINLYRALGGGWNEN
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgatttaatctttctatttatataatagcgggcttcctcttgttttttgtttct
tgtagagttacaaaagattaccaaagccctaacattaactctaaagaatatcttagagtt
aataaagatcattcaattgatactttagctgaagtaccccaaatcccttggaaatcattt
tttactgatacgcttttgcaaaattatattgaagcagcattggtagagaattacgatatg
aaaatagcctttgaaaggatagaaatcgcagaggctattcaccatcagagtaaacaagca
tttttgcctaatatatctggcaatgtatctgttgccagatctaagttggcatttacccaa
ggttttggaattatagatgatgtaacgcaatacgatttagggctcagtgtatcttgggaa
gctgatatttggggtaaattaaaaagtgcaaataaggcacagttagcaagactcttgcag
tcaaaagcttatcaacacgctgtgcaagcagcattaatcacaaatattgctagccaatat
tatcagttaattgcattggatgagcaattgaatattttacaaagaacagctgagaataga
aaggctaatgtaacatcaattcaaaagttacaaacggctaatgtggtaaatagcgtggca
gttttgcaaagccaagcgaatcaatacgatgcagaaatagccatatttaatgtagagaag
caaatttgggaagtagaaaatgctttagctgtgcttttagggaaatcaactgcaaaaatt
gaacgaactagatttgatgaaataaatgataaaagtccgttaccagtttttgaaagtatt
aatgcagaattaatggcaaaccgccctgatgtaatacaggcagaacttgcttaccgcagt
gcatttgaacttaccaatgttgccagaacccaattttatccatcatttacactaactgga
gcaggtggtttttcgagttttgagtttagcgatttgtttacagaaaacattggacttttt
ggcaatgtagcggctggtttatttcaaccaatttttaataaaggtattaatgaggctaat
ttaaaaactgccaagtctgaacagcaaattgcattttataatttcgaatatactttgcta
aaagctggacaagagatttcagatgcctataattcttttcaaaaggcaaatctgaaaatt
gaaaagcgggttttacaacttgaagctctatctaaatctgtagatgacactaaaaagtta
ttacagtataattctcaaactaattatacagatgtattaacatcagaacagaatttactt
gctgcagaaattggcaatgtgaatgacatcctagaacaaaaaattgcccttatcaatctt
tacagagcattaggtggcggttggaatgaaaactaa
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