Chondrinema litorale: OQ292_25970
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Entry
OQ292_25970 CDS
T09098
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
clit
Chondrinema litorale
Pathway
clit01501
beta-Lactam resistance
clit01503
Cationic antimicrobial peptide (CAMP) resistance
clit02020
Two-component system
clit03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
OQ292_25970
09132 Signal transduction
02020 Two-component system
OQ292_25970
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OQ292_25970
01503 Cationic antimicrobial peptide (CAMP) resistance
OQ292_25970
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clit02000
]
OQ292_25970
02044 Secretion system [BR:
clit02044
]
OQ292_25970
01504 Antimicrobial resistance genes [BR:
clit01504
]
OQ292_25970
Transporters [BR:
clit02000
]
Other transporters
Pores ion channels [TC:
1
]
OQ292_25970
Secretion system [BR:
clit02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
OQ292_25970
RTX toxin transporter
OQ292_25970
Multiple protein transporter
OQ292_25970
RaxAB-RaxC type I secretion system protein
OQ292_25970
Antimicrobial resistance genes [BR:
clit01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
OQ292_25970
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
OQ292_25970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
NUP
Motif
Other DBs
NCBI-ProteinID:
UZR97352
LinkDB
All DBs
Position
unnamed4:254373..255878
Genome browser
AA seq
501 aa
AA seq
DB search
MQQFNFQHSIFKPSRLIAIFLLSVQFAFAQQTDQMSIEEVIDRATTTSLLALKSTNIYLA
GYWQYNSYKASLLPQVNLKLTPVDYNRSFSQQWNSNEEAFAYYETQTLNNYSTVSIDQNL
AFSGGTLSLQSSLDHLENLTDDQYSAFNASPVQLAYTQPILGFNDFKWKKKLSPLAYELA
KREYLEVMQQARLFAINYYFDLLIAQVSLEIAKSNQATSDTLYHIGLKRFEIASITKEDL
LNLELNKYSASIEVARTGKEVKVAQYNLTSFLGMSKDALITPMIPENNFVKNIPLEKAIE
NGMRYNPEPLRLEESMLEAEKNLDQINKDTRFNANVVAQFGLNNSDKTLRQTYNNLTNRQ
AVAVGIQIPLVDWGQGKGERMLALKQMEVAQIEMEQSKMDFEQEIVLNVIDYNLQHQLVE
NALRAAEISEEAYQLTKKRFILGNVDVLKLNASAEARQQEKESYIDALYNLWRVYYEIQE
LTLFDYGKDTPLSADFDSMIK
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagtttaactttcaacatagcatctttaaaccatcaaggttgatagccatcttc
ctgttaagtgttcaatttgcctttgcccaacaaactgatcaaatgagtattgaggaggta
attgatagggctaccactacttcactattggcattaaaatctactaatatttatctggct
ggttattggcaatataattcatacaaggcttccttgctacctcaagtcaacctaaagctt
actccagttgattataatcgttctttttctcagcaatggaatagtaatgaagaagcattt
gcttattacgaaacacaaacactgaacaattattccactgtttccatcgatcaaaatttg
gctttttctggtggtacactttctctgcaaagtagtttagatcatttagaaaacttgaca
gacgatcaatattcggcttttaatgcaagtccagtgcaactggcttacacacagccaatt
ttgggctttaatgatttcaagtggaaaaaaaagttgagtccgttagcttacgaattggca
aaaagagagtatctggaagtaatgcagcaagcaagactttttgcgattaattactatttt
gatttgctcatagcacaagtcagtttagaaattgcaaaaagcaatcaggcaacatcagat
actttatatcatattggtttaaagcgttttgaaatagcttccatcactaaagaagattta
ctcaatttagaactcaataagtattcggcttctatcgaggtagcaagaacaggcaaagaa
gtaaaagtggctcaatataaccttacttcattcttaggcatgagtaaagatgcgctcatt
acaccaatgattcctgaaaataacttcgtgaaaaatatccctttagaaaaagctattgaa
aacgggatgaggtataatcctgagccattgcgcttagaagaaagtatgttagaagcagaa
aaaaatctagatcagataaataaagacactcgctttaatgccaatgtagttgcgcagttc
ggtttaaataatagtgataaaacgcttaggcagacttataataatttaaccaaccggcag
gctgtggcagttggtattcaaataccattagtagactgggggcaaggaaaaggagagaga
atgttggcattaaaacaaatggaagtagctcaaattgaaatggaacaaagtaaaatggat
tttgagcaagagattgtcttgaacgtaatcgattataatttgcaacatcaacttgttgag
aatgctttgcgtgccgctgaaatttctgaggaggcttatcaacttaccaaaaagcgcttt
atactgggcaatgtagatgtgcttaaacttaatgcttctgctgaagcgaggcagcaagaa
aaagagtcttatattgatgctttgtataacctttggcgcgtgtattatgagattcaggag
ctcacgctatttgattatggaaaagatacaccactttcggctgattttgatagtatgata
aaatga
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