Chondrinema litorale: OQ292_34640
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Entry
OQ292_34640 CDS
T09098
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
clit
Chondrinema litorale
Pathway
clit01501
beta-Lactam resistance
clit02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OQ292_34640
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OQ292_34640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clit02000
]
OQ292_34640
01504 Antimicrobial resistance genes [BR:
clit01504
]
OQ292_34640
Transporters [BR:
clit02000
]
Other transporters
Pores ion channels [TC:
1
]
OQ292_34640
Antimicrobial resistance genes [BR:
clit01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OQ292_34640
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
OQ292_34640
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
OQ292_34640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
CTD12
Motif
Other DBs
NCBI-ProteinID:
UZR99147
LinkDB
All DBs
Position
unnamed14:complement(23812..25257)
Genome browser
AA seq
481 aa
AA seq
DB search
MKYTGNIFIIILLTLVGCKIHEPYNRPSFKEPANFYGSKNNSGEDSISLAETNWKDFFSD
SILISLIDTALKNNIDLQIADEYIEIGVSRLKQSKANYLPSVTAAPFKYRRDLYSENYNN
YGSNRSRTFYDGETAPTSLYTERMEYESSIDLSWEIDIWGKLKSLKKASLSSYLKSIEFQ
KAVRTSLIAEIATTYSNLILLESQIEVFKGNLSLSDSTLRMVELQYDAGEVTSLAVKQTQ
SQKLRAQTLIPQLEREYFKQENRLNRLIGRYPESIATEELDWDMHEGDYVAGMPLELIRN
RPDVAAAEFSLQESYARVGIANAMRYPSISLGASVGLNSFELEKLLNPAGSGFLLLNGMV
FQPIFQKRKLRTNYEIALSDKKIAELEFKDKFLQAINEVSDALVAIEKLEEEYELAQERV
TAARNSVKDASLLFRSGLANYLEVLTAQSEALDSELNLEDVKMQIFAANVELYRSLGGGW
R
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatactggaaatatatttataataatacttctgacacttgttggatgtaaaata
catgaaccctataatcgaccgagtttcaaagaacctgctaatttttatggttcaaaaaat
aactctggagaagattctattagcttagctgaaaccaattggaaagatttttttagtgat
tcaattttgatttcactaatcgatacagcattaaagaataacatcgatcttcaaatagca
gatgaatatatagaaataggtgtatcgcgactgaaacagtctaaagccaattatttgcct
tctgtaacagcggcaccatttaaatatagaagagatctctattcagagaattataacaac
tatggttctaatcgttcaagaaccttttatgatggagaaacagcaccaacttctttatat
acagaaaggatggagtatgaatcatcaatcgatcttagttgggaaatagacatttggggt
aagttaaaatctttaaagaaagctagcttaagctcatatttaaaatcaattgagtttcag
aaagcagtgcgtacatcattgatcgctgaaatagctactacttactcaaatttgatatta
ctcgaatcgcaaatagaagtttttaaaggaaacttatctctgagtgatagtacacttcgt
atggttgagttacagtacgatgctggtgaggtaacatctctagcggtaaaacaaactcag
tctcaaaagttaagagcacaaaccttaattcctcaattagagagagagtatttcaaacaa
gaaaataggctgaatcgcttaataggccgttacccagaaagcatagctacagaagagtta
gattgggatatgcacgaaggtgattatgtggcgggtatgccattagagcttatcagaaat
agaccagatgtggcagcggctgagttttctttgcaggaaagttatgctagagtaggtata
gctaatgcaatgcgatatccttcaatcagtttgggtgcaagtgtcggtttaaattctttt
gaattagaaaaattgttaaatccggcaggttcaggttttctcttacttaacggaatggtt
tttcaaccgattttccaaaagagaaagctaagaacaaactacgagatagctctttctgat
aaaaaaattgcagaactagaatttaaggataaattcctccaagcaattaatgaggtttct
gatgctttagtagctattgagaaattggaagaagagtatgaattagcacaagaaagggta
acagctgcgcgtaattcagttaaagatgcttcactattattccgaagtggtttggcaaat
taccttgaggttcttaccgctcaaagtgaggcactagatagtgaactaaacttagaagat
gtaaaaatgcagatttttgctgccaatgtagaactttacagaagtcttggtggtggttgg
agataa
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