Chondrinema litorale: OQ292_39310
Help
Entry
OQ292_39310 CDS
T09098
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
clit
Chondrinema litorale
Pathway
clit01501
beta-Lactam resistance
clit01503
Cationic antimicrobial peptide (CAMP) resistance
clit02020
Two-component system
clit03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
OQ292_39310
09132 Signal transduction
02020 Two-component system
OQ292_39310
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OQ292_39310
01503 Cationic antimicrobial peptide (CAMP) resistance
OQ292_39310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clit02000
]
OQ292_39310
02044 Secretion system [BR:
clit02044
]
OQ292_39310
01504 Antimicrobial resistance genes [BR:
clit01504
]
OQ292_39310
Transporters [BR:
clit02000
]
Other transporters
Pores ion channels [TC:
1
]
OQ292_39310
Secretion system [BR:
clit02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
OQ292_39310
RTX toxin transporter
OQ292_39310
Multiple protein transporter
OQ292_39310
RaxAB-RaxC type I secretion system protein
OQ292_39310
Antimicrobial resistance genes [BR:
clit01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
OQ292_39310
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
OQ292_39310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
UZR99941
LinkDB
All DBs
Position
unnamed22:complement(49531..50862)
Genome browser
AA seq
443 aa
AA seq
DB search
MRNIKYIFLLLISLFTSFLCKAQTVSDATGLGIQEIIAITLENNYDIKISKNTSKSTSID
AVPGNAGYLPTVALSGSYNYSSSNSDIVFADPTMPEISASGAVTENIAAGVTLNYNIYSG
GNRKYTYEKLKNENYLSDLQLQQSIETSVLNVVSQFLNVVNYYDSYEINKESVDISLKRY
ERAENNYSFGAMSKLELLNAEVDLRNDSTNLVQSKVAFEKSIKDLNNLMGIDPDSTYTIN
PDFTIEDDLVVAELIEDALNKNTSYLLARSTIRSRELDLKITKTNYLPTLDFSGGYEYSN
VSYGASFISTQKGLGWNAGISVSYNIFDAGSRKREKEKAEIQVINQQLSIDQTKNNLKTD
LLKAYDDYQSNINLLSLTERNVKTAMINYERSTEAFSTGQITGIELREAQLNLLNAKYNV
SLQRLQAKISEVSLHYYSGNLVK
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatattaaatatatatttctgttactaatctcactatttacttcttttttatgc
aaagcacaaacagtgagtgatgctacaggattaggtattcaggaaataatagcaattacg
ttagaaaacaattatgatattaaaataagtaagaatacttcaaaatctacttcaattgat
gctgtgccaggaaatgccggttatttgccaactgtggcactttctggaagttacaattac
tcttctagtaattcagatattgtttttgctgatcctactatgcccgagatttctgcttct
ggggcagttacagaaaacatagctgcgggagtaacattaaactataacatatatagtggt
ggcaatagaaaatatacttacgaaaaactgaaaaacgaaaactatctttcagacctacaa
cttcaacaaagcattgaaacttctgtgctgaatgtggtttcgcagtttttaaatgtggta
aattattacgactcatatgaaattaataaagagtctgttgacatttcgctaaaaaggtat
gagagggctgaaaataattactcttttggagcaatgagtaaacttgaattattaaatgct
gaggttgaccttagaaatgatagtactaatttagttcaatcaaaagtcgcatttgagaaa
tcgataaaagatcttaataatctaatggggattgatccagattcaacttacacaattaat
cctgactttaccatagaagatgatttggtggttgctgagttaatagaagatgctttaaat
aaaaatacaagctacctattggctagatctacaatacgatctagagaattagatttgaaa
ataacaaaaacaaattacctgcctactttagatttttctggtggttatgagtatagcaat
gttagctatggagccagctttataagtactcaaaaaggcctcggttggaatgcaggaatt
agtgtatcatacaatatttttgatgcaggtagcaggaaaagggaaaaagaaaaggctgaa
atacaggtaataaatcaacaattatcgatagatcagacaaaaaataatttgaaaacagat
ttgctaaaagcatacgatgactatcaatctaacataaacttgctaagccttactgaacgt
aatgtgaaaacagcaatgataaattatgaaagaagtacagaagctttcagtacaggacaa
attacaggaatagaattaagagaagcccagctaaatctattaaatgccaagtataatgta
agcctgcaacgtttacaagcaaagatatcagaagttagtctacattattattcaggcaac
cttgtaaagtaa
DBGET
integrated database retrieval system
