KEGG   PATHWAY: dnm03050
Entry
dnm03050                    Pathway                                
Name
Proteasome - Dasypus novemcinctus (nine-banded armadillo)
Description
The proteasome is a protein-destroying apparatus involved in many essential cellular functions, such as regulation of cell cycle, cell differentiation, signal transduction pathways, antigen processing for appropriate immune responses, stress signaling, inflammatory responses, and apoptosis. It is capable of degrading a variety of cellular proteins in a rapid and timely fashion and most substrate proteins are modified by ubiquitin before their degradation by the proteasome. The proteasome is a large protein complex consisting of a proteolytic core called the 20S particle and ancillary factors that regulate its activity in various ways. The most common form is the 26S proteasome containing one 20S core particle and two 19S regulatory particles that enable the proteasome to degrade ubiquitinated proteins by an ATP-dependent mechanism. Another form is the immunoproteasome containing two 11S regulatory particles, PA28 alpha and PA28 beta, which are induced by interferon gamma under the conditions of intensified immune response. Other regulatory particles include PA28 gamma and PA200. Although PA28 gamma also belongs to a family of activators of the 20S proteasome, it is localized within the nucleus and forms a homoheptamer. PA28 gamma has been implicated in the regulation of cell cycle progression and apoptosis. PA200 has been identified as a large nuclear protein that stimulates proteasomal hydrolysis of peptides.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
dnm03050  Proteasome
dnm03050

Other DBs
GO: 0000502
Organism
Dasypus novemcinctus (nine-banded armadillo) [GN:dnm]
Gene
101431882  PSMD3; 26S proteasome non-ATPase regulatory subunit 3 [KO:K03033]
101443144  PSMD9; 26S proteasome non-ATPase regulatory subunit 9 [KO:K06693]
101420436  PSMD12; LOW QUALITY PROTEIN: 26S proteasome non-ATPase regulatory subunit 12 [KO:K03035]
101439386  PSMD11; LOW QUALITY PROTEIN: 26S proteasome non-ATPase regulatory subunit 11 [KO:K03036]
101431001  PSMD6; 26S proteasome non-ATPase regulatory subunit 6 [KO:K03037]
101443291  PSMD7; 26S proteasome non-ATPase regulatory subunit 7 [KO:K03038]
101415689  PSMD13; 26S proteasome non-ATPase regulatory subunit 13 [KO:K03039]
101420685  PSMD14; 26S proteasome non-ATPase regulatory subunit 14 [KO:K03030]
101433348  PSMD8; 26S proteasome non-ATPase regulatory subunit 8 [KO:K03031]
101421174  PSMD4; 26S proteasome non-ATPase regulatory subunit 4 isoform X1 [KO:K03029]
101432441  PSMD2; 26S proteasome non-ATPase regulatory subunit 2 [KO:K03028]
101423375  PSMD1; 26S proteasome non-ATPase regulatory subunit 1 [KO:K03032]
101413566  ADRM1; LOW QUALITY PROTEIN: proteasomal ubiquitin receptor ADRM1 [KO:K06691]
101446378  PSMC2; 26S proteasome regulatory subunit 7 [KO:K03061]
101416831  PSMC1; 26S proteasome regulatory subunit 4 [KO:K03062]
101445299  PSMC5; 26S protease regulatory subunit 8 [KO:K03066]
101428360  PSMC6; 26S proteasome regulatory subunit 10B [KO:K03064]
101436834  PSMC3; 26S proteasome regulatory subunit 6A isoform X1 [KO:K03065]
101414631  PSMC4; 26S proteasome regulatory subunit 6B [KO:K03063]
101445479  PSME1; proteasome activator complex subunit 1 [KO:K06696]
101437584  PSME2; proteasome activator complex subunit 2 [KO:K06697]
105747350  proteasome activator complex subunit 3 [KO:K06698]
101446749  PSME3; LOW QUALITY PROTEIN: proteasome activator complex subunit 3 [KO:K06698]
101444821  PSME4; LOW QUALITY PROTEIN: proteasome activator complex subunit 4 [KO:K06699]
101413442  PSMA6; proteasome subunit alpha type-6 [KO:K02730] [EC:3.4.25.1]
101442089  PSMA2; proteasome subunit alpha type-2 [KO:K02726] [EC:3.4.25.1]
101424495  PSMA4; proteasome subunit alpha type-4 [KO:K02728] [EC:3.4.25.1]
101416667  PSMA7; proteasome subunit alpha type-7 [KO:K02731] [EC:3.4.25.1]
101442217  PSMA8; proteasome subunit alpha type-7-like isoform X1 [KO:K02731] [EC:3.4.25.1]
101423206  PSMA5; LOW QUALITY PROTEIN: proteasome subunit alpha type-5 [KO:K02729] [EC:3.4.25.1]
101441413  PSMA1; LOW QUALITY PROTEIN: proteasome subunit alpha type-1 [KO:K02725] [EC:3.4.25.1]
101426202  proteasome subunit alpha type-3-like [KO:K02727] [EC:3.4.25.1]
101420460  PSMA3; proteasome subunit alpha type-3 isoform X1 [KO:K02727] [EC:3.4.25.1]
101411043  PSMB6; LOW QUALITY PROTEIN: proteasome subunit beta type-6 [KO:K02738] [EC:3.4.25.1]
101428566  LOW QUALITY PROTEIN: proteasome subunit beta type-7-like [KO:K02739] [EC:3.4.25.1]
101421409  PSMB7; proteasome subunit beta type-7 [KO:K02739] [EC:3.4.25.1]
101417745  proteasome subunit beta type-3-like [KO:K02735] [EC:3.4.25.1]
101416657  PSMB3; proteasome subunit beta type-3 [KO:K02735] [EC:3.4.25.1]
101426960  PSMB2; proteasome subunit beta type-2 [KO:K02734] [EC:3.4.25.1]
101414488  PSMB5; proteasome subunit beta type-5 [KO:K02737] [EC:3.4.25.1]
101434834  PSMB1; proteasome subunit beta type-1 [KO:K02732] [EC:3.4.25.1]
101427222  PSMB4; proteasome subunit beta type-4 [KO:K02736] [EC:3.4.25.1]
101422439  PSMB9; proteasome subunit beta type-9 [KO:K02741] [EC:3.4.25.1]
101434444  PSMB10; proteasome subunit beta type-10 isoform X2 [KO:K02733] [EC:3.4.25.1]
101422881  PSMB8; proteasome subunit beta type-8 isoform X1 [KO:K02740] [EC:3.4.25.1]
101429169  PSMB11; proteasome subunit beta type-11 [KO:K11598] [EC:3.4.25.1]
101422877  IFNG; interferon gamma [KO:K04687]
101411636  PSMF1; proteasome inhibitor PI31 subunit [KO:K06700]
101427569  POMP; proteasome maturation protein [KO:K11599]
101445757  proteasome maturation protein-like [KO:K11599]
Reference
  Authors
Hirano Y, Murata S, Tanaka K
  Title
Large- and small-scale purification of mammalian 26S proteasomes.
  Journal
Methods Enzymol 399:227-40 (2005)
DOI:10.1016/S0076-6879(05)99015-0
Reference
  Authors
Saeki Y, Tanaka K
  Title
Cell biology: two hands for degradation.
  Journal
Nature 453:460-1 (2008)
DOI:10.1038/453460a
Reference
  Authors
Smith DM, Benaroudj N, Goldberg A
  Title
Proteasomes and their associated ATPases: a destructive combination.
  Journal
J Struct Biol 156:72-83 (2006)
DOI:10.1016/j.jsb.2006.04.012
Reference
  Authors
Strehl B, Seifert U, Kruger E, Heink S, Kuckelkorn U, Kloetzel PM
  Title
Interferon-gamma, the functional plasticity of the ubiquitin-proteasome system, and MHC class I antigen processing.
  Journal
Immunol Rev 207:19-30 (2005)
DOI:10.1111/j.0105-2896.2005.00308.x
Reference
  Authors
Darwin KH
  Title
Prokaryotic ubiquitin-like protein (Pup), proteasomes and pathogenesis.
  Journal
Nat Rev Microbiol 7:485-91 (2009)
DOI:10.1038/nrmicro2148
Reference
  Authors
Tomko RJ Jr, Hochstrasser M
  Title
Molecular architecture and assembly of the eukaryotic proteasome.
  Journal
Annu Rev Biochem 82:415-45 (2013)
DOI:10.1146/annurev-biochem-060410-150257
Reference
  Authors
Budenholzer L, Cheng CL, Li Y, Hochstrasser M
  Title
Proteasome Structure and Assembly.
  Journal
J Mol Biol 429:3500-3524 (2017)
DOI:10.1016/j.jmb.2017.05.027
Reference
  Authors
Cloos J, Roeten MS, Franke NE, van Meerloo J, Zweegman S, Kaspers GJ, Jansen G
  Title
(Immuno)proteasomes as therapeutic target in acute leukemia.
  Journal
Cancer Metastasis Rev 36:599-615 (2017)
DOI:10.1007/s10555-017-9699-4
Reference
  Authors
Sakata E, Bohn S, Mihalache O, Kiss P, Beck F, Nagy I, Nickell S, Tanaka K, Saeki Y, Forster F, Baumeister W
  Title
Localization of the proteasomal ubiquitin receptors Rpn10 and Rpn13 by electron cryomicroscopy.
  Journal
Proc Natl Acad Sci U S A 109:1479-84 (2012)
DOI:10.1073/pnas.1119394109
Related
pathway
dnm04120  Ubiquitin mediated proteolysis
KO pathway
ko03050   
LinkDB

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