KEGG   PATHWAY: els03050
Entry
els03050                    Pathway                                
Name
Proteasome - Esox lucius (northern pike)
Description
The proteasome is a protein-destroying apparatus involved in many essential cellular functions, such as regulation of cell cycle, cell differentiation, signal transduction pathways, antigen processing for appropriate immune responses, stress signaling, inflammatory responses, and apoptosis. It is capable of degrading a variety of cellular proteins in a rapid and timely fashion and most substrate proteins are modified by ubiquitin before their degradation by the proteasome. The proteasome is a large protein complex consisting of a proteolytic core called the 20S particle and ancillary factors that regulate its activity in various ways. The most common form is the 26S proteasome containing one 20S core particle and two 19S regulatory particles that enable the proteasome to degrade ubiquitinated proteins by an ATP-dependent mechanism. Another form is the immunoproteasome containing two 11S regulatory particles, PA28 alpha and PA28 beta, which are induced by interferon gamma under the conditions of intensified immune response. Other regulatory particles include PA28 gamma and PA200. Although PA28 gamma also belongs to a family of activators of the 20S proteasome, it is localized within the nucleus and forms a homoheptamer. PA28 gamma has been implicated in the regulation of cell cycle progression and apoptosis. PA200 has been identified as a large nuclear protein that stimulates proteasomal hydrolysis of peptides.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
els03050  Proteasome
els03050

Other DBs
GO: 0000502
Organism
Esox lucius (northern pike) [GN:els]
Gene
105007810  psmd3; 26S proteasome non-ATPase regulatory subunit 3 [KO:K03033]
105026097  psmd9; 26S proteasome non-ATPase regulatory subunit 9 [KO:K06693]
105021574  psmd12; 26S proteasome non-ATPase regulatory subunit 12 [KO:K03035]
105007394  26S proteasome non-ATPase regulatory subunit 11B [KO:K03036]
105028427  26S proteasome non-ATPase regulatory subunit 11A [KO:K03036]
105017275  psmd6; 26S proteasome non-ATPase regulatory subunit 6 [KO:K03037]
105022176  psmd7; 26S proteasome non-ATPase regulatory subunit 7 [KO:K03038]
105007370  psmd13; 26S proteasome non-ATPase regulatory subunit 13 [KO:K03039]
105020011  psmd14; 26S proteasome non-ATPase regulatory subunit 14 [KO:K03030]
105029600  psmd8; 26S proteasome non-ATPase regulatory subunit 8 [KO:K03031]
105030262  sem1; 26S proteasome complex subunit SEM1 [KO:K10881]
105008611  26S proteasome non-ATPase regulatory subunit 4-like [KO:K03029]
105029227  26S proteasome non-ATPase regulatory subunit 4 isoform X1 [KO:K03029]
105016666  psmd2; 26S proteasome non-ATPase regulatory subunit 2 [KO:K03028]
105025347  psmd1; 26S proteasome non-ATPase regulatory subunit 1 [KO:K03032]
105022338  proteasomal ubiquitin receptor ADRM1 [KO:K06691]
105027948  proteasomal ubiquitin receptor ADRM1 [KO:K06691]
105020338  psmc2; 26S proteasome regulatory subunit 7 [KO:K03061]
105017692  26S proteasome regulatory subunit 4 [KO:K03062]
105015471  psmc1; 26S proteasome regulatory subunit 4 [KO:K03062]
105006186  psmc5; 26S proteasome regulatory subunit 8 [KO:K03066]
105015522  psmc6; proteasome (prosome, macropain) 26S subunit, ATPase, 6 [KO:K03064]
105017573  26S protease regulatory subunit 10B-like [KO:K03064]
105017356  psmc3; 26S proteasome regulatory subunit 6A isoform X1 [KO:K03065]
105031108  psmc4; 26S proteasome regulatory subunit 6B isoform X1 [KO:K03063]
105019501  psme1; proteasome activator complex subunit 1 [KO:K06696]
105030052  psme2; proteasome activator complex subunit 2 [KO:K06697]
105007570  psme3; proteasome activator complex subunit 3 isoform X2 [KO:K06698]
105027620  proteasome activator complex subunit 3-like [KO:K06698]
105008183  psme4; proteasome activator complex subunit 4 isoform X1 [KO:K06699]
105015311  proteasome subunit alpha type-6 isoform X1 [KO:K02730] [EC:3.4.25.1]
105015479  psma6; proteasome subunit alpha type-6 [KO:K02730] [EC:3.4.25.1]
105026880  proteasome subunit alpha type-6 isoform X1 [KO:K02730] [EC:3.4.25.1]
105012375  psma2; proteasome subunit alpha type-2 [KO:K02726] [EC:3.4.25.1]
105018690  proteasome subunit alpha type-4 [KO:K02728] [EC:3.4.25.1]
105014027  psma4; proteasome subunit alpha type-4 [KO:K02728] [EC:3.4.25.1]
105011885  proteasome subunit alpha type-7 [KO:K02731] [EC:3.4.25.1]
105018818  psma8; proteasome subunit alpha-type 8 [KO:K02731] [EC:3.4.25.1]
105025742  psma7; proteasome subunit alpha type-7 [KO:K02731] [EC:3.4.25.1]
105025120  psma5; proteasome subunit alpha type-5 [KO:K02729] [EC:3.4.25.1]
105018632  psma1; proteasome subunit alpha type-1 [KO:K02725] [EC:3.4.25.1]
114829595  proteasome subunit alpha type-1-like [KO:K02725] [EC:3.4.25.1]
114834052  proteasome subunit alpha type-1-like [KO:K02725] [EC:3.4.25.1]
114834054  proteasome subunit alpha type-1-like [KO:K02725] [EC:3.4.25.1]
105030845  psma3; proteasome subunit alpha type-3 isoform X2 [KO:K02727] [EC:3.4.25.1]
105010830  proteasome subunit beta type-6-like [KO:K02738] [EC:3.4.25.1]
105006396  proteasome subunit beta type-6-like [KO:K02738] [EC:3.4.25.1]
105009103  proteasome subunit beta type-6-B like protein [KO:K02738] [EC:3.4.25.1]
105021767  psmb7; proteasome subunit beta type-7 [KO:K02739] [EC:3.4.25.1]
105028056  psb7; proteasome subunit beta type-7 [KO:K02739] [EC:3.4.25.1]
105009102  proteasome subunit beta type-7-like [KO:K02739] [EC:3.4.25.1]
105021457  psmb3; proteasome subunit beta type-3 [KO:K02735] [EC:3.4.25.1]
105027904  psmb2; proteasome subunit beta type-2 [KO:K02734] [EC:3.4.25.1]
105011798  proteasome subunit beta type-5 [KO:K02737] [EC:3.4.25.1]
105021428  proteasome subunit beta type-5 [KO:K02737] [EC:3.4.25.1]
105021198  psmb1; proteasome subunit beta type-1 [KO:K02732] [EC:3.4.25.1]
105012698  psmb4; proteasome subunit beta type-4 [KO:K02736] [EC:3.4.25.1]
105009101  proteasome subunit beta type-9 [KO:K02741] [EC:3.4.25.1]
105009104  proteasome subunit beta type-8-like [KO:K02740] [EC:3.4.25.1]
105011799  proteasome subunit beta type-11 [KO:K11598] [EC:3.4.25.1]
105022161  proteasome subunit beta type-11 [KO:K11598] [EC:3.4.25.1]
105017796  ifng1; interferon gamma 1 precursor [KO:K04687]
105008682  psmf1; proteasome inhibitor PI31 subunit [KO:K06700]
105019621  pomp; proteasome maturation protein [KO:K11599]
Reference
  Authors
Hirano Y, Murata S, Tanaka K
  Title
Large- and small-scale purification of mammalian 26S proteasomes.
  Journal
Methods Enzymol 399:227-40 (2005)
DOI:10.1016/S0076-6879(05)99015-0
Reference
  Authors
Saeki Y, Tanaka K
  Title
Cell biology: two hands for degradation.
  Journal
Nature 453:460-1 (2008)
DOI:10.1038/453460a
Reference
  Authors
Smith DM, Benaroudj N, Goldberg A
  Title
Proteasomes and their associated ATPases: a destructive combination.
  Journal
J Struct Biol 156:72-83 (2006)
DOI:10.1016/j.jsb.2006.04.012
Reference
  Authors
Strehl B, Seifert U, Kruger E, Heink S, Kuckelkorn U, Kloetzel PM
  Title
Interferon-gamma, the functional plasticity of the ubiquitin-proteasome system, and MHC class I antigen processing.
  Journal
Immunol Rev 207:19-30 (2005)
DOI:10.1111/j.0105-2896.2005.00308.x
Reference
  Authors
Darwin KH
  Title
Prokaryotic ubiquitin-like protein (Pup), proteasomes and pathogenesis.
  Journal
Nat Rev Microbiol 7:485-91 (2009)
DOI:10.1038/nrmicro2148
Reference
  Authors
Tomko RJ Jr, Hochstrasser M
  Title
Molecular architecture and assembly of the eukaryotic proteasome.
  Journal
Annu Rev Biochem 82:415-45 (2013)
DOI:10.1146/annurev-biochem-060410-150257
Reference
  Authors
Budenholzer L, Cheng CL, Li Y, Hochstrasser M
  Title
Proteasome Structure and Assembly.
  Journal
J Mol Biol 429:3500-3524 (2017)
DOI:10.1016/j.jmb.2017.05.027
Reference
  Authors
Cloos J, Roeten MS, Franke NE, van Meerloo J, Zweegman S, Kaspers GJ, Jansen G
  Title
(Immuno)proteasomes as therapeutic target in acute leukemia.
  Journal
Cancer Metastasis Rev 36:599-615 (2017)
DOI:10.1007/s10555-017-9699-4
Reference
  Authors
Sakata E, Bohn S, Mihalache O, Kiss P, Beck F, Nagy I, Nickell S, Tanaka K, Saeki Y, Forster F, Baumeister W
  Title
Localization of the proteasomal ubiquitin receptors Rpn10 and Rpn13 by electron cryomicroscopy.
  Journal
Proc Natl Acad Sci U S A 109:1479-84 (2012)
DOI:10.1073/pnas.1119394109
Related
pathway
els04120  Ubiquitin mediated proteolysis
KO pathway
ko03050   
LinkDB

DBGET integrated database retrieval system