KEGG   PATHWAY: elu02010
Entry
elu02010                    Pathway                                
Name
ABC transporters - Escherichia coli UM146
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
Pathway map
elu02010  ABC transporters
elu02010

Other DBs
GO: 0043190 0043191 0043192
TC: 3.A.1
Organism
Escherichia coli UM146 [GN:elu]
Gene
UM146_00005  [KO:K09972] [EC:7.4.2.1]
UM146_00010  [KO:K09971]
UM146_00015  [KO:K09970]
UM146_00020  [KO:K09969]
UM146_00100  [KO:K10439]
UM146_00105  [KO:K10441] [EC:7.5.2.7]
UM146_00110  [KO:K10440]
UM146_00375  [KO:K06861] [EC:7.5.2.5]
UM146_00405  [KO:K02065]
UM146_00410  [KO:K02066]
UM146_00415  [KO:K02067]
UM146_00420  [KO:K07323]
UM146_00425  [KO:K07122]
UM146_01455  [KO:K07091]
UM146_01460  [KO:K11720]
UM146_01600  [KO:K09688]
UM146_01605  [KO:K09689] [EC:7.6.2.12]
UM146_01665  [KO:K10107]
UM146_01885  [KO:K16787] [EC:7.-.-.-]
UM146_01890  [KO:K16786] [EC:7.-.-.-]
UM146_01895  [KO:K16785]
UM146_03185  proX; glycine betaine transporter periplasmic subunit [KO:K02002]
UM146_03190  [KO:K02001]
UM146_03195  [KO:K02000] [EC:7.6.2.9]
UM146_03980  [KO:K23545]
UM146_03985  [KO:K23547]
UM146_03990  [KO:K23546]
UM146_04500  [KO:K02048]
UM146_04505  [KO:K02046]
UM146_04510  cysW; sulfate/thiosulfate transporter permease subunit [KO:K02047]
UM146_04515  [KO:K02045] [EC:7.3.2.3]
UM146_05260  [KO:K10013]
UM146_05265  [KO:K10014]
UM146_05270  [KO:K10016]
UM146_05275  [KO:K10015]
UM146_05280  [KO:K10017] [EC:7.4.2.1]
UM146_05745  [KO:K06159]
UM146_05800  [KO:K02193] [EC:7.6.2.5]
UM146_05805  [KO:K02194]
UM146_05810  [KO:K02195]
UM146_05815  [KO:K02196]
UM146_05890  [KO:K13896]
UM146_05895  [KO:K13895]
UM146_05900  [KO:K13894]
UM146_05905  [KO:K13893]
UM146_06040  [KO:K10540]
UM146_06045  [KO:K10542] [EC:7.5.2.11]
UM146_06050  mglC; beta-methylgalactoside transporter inner membrane component [KO:K10541]
UM146_06130  [KO:K05845]
UM146_06135  [KO:K05846]
UM146_06140  [KO:K05847] [EC:7.6.2.9]
UM146_06145  [KO:K05846]
UM146_07300  [KO:K14698] [EC:7.-.-.-]
UM146_07305  [KO:K14699] [EC:7.-.-.-]
UM146_07580  [KO:K02424]
UM146_07590  [KO:K10009]
UM146_07595  [KO:K10010] [EC:7.4.2.1]
UM146_07665  [KO:K10537]
UM146_07670  araG; L-arabinose transporter ATP-binding protein [KO:K10539] [EC:7.5.2.12]
UM146_07675  araH; L-arabinose transporter permease protein [KO:K10538]
UM146_07855  znuB; high-affinity zinc transporter membrane component [KO:K09816]
UM146_07860  znuC; high-affinity zinc transporter ATPase [KO:K09817] [EC:7.2.2.20]
UM146_07865  znuA; high-affinity zinc transporter periplasmic component [KO:K09815]
UM146_08595  [KO:K06073]
UM146_08605  [KO:K06074] [EC:7.6.2.8]
UM146_09575  [KO:K02471]
UM146_10125  [KO:K15580]
UM146_10185  [KO:K10112] [EC:7.5.2.-]
UM146_10270  [KO:K19226]
UM146_10275  [KO:K19227]
UM146_10280  [KO:K19228]
UM146_10285  [KO:K19229]
UM146_10290  [KO:K19230]
UM146_10835  [KO:K10823]
UM146_10840  oppD; oligopeptide transporter ATP-binding component [KO:K15583]
UM146_10845  [KO:K15582]
UM146_10850  oppB; oligopeptide transporter permease [KO:K15581]
UM146_10855  [KO:K15580]
UM146_11305  [KO:K11604]
UM146_11310  [KO:K11607]
UM146_11315  [KO:K11605]
UM146_11320  [KO:K11606]
UM146_11690  potA; putrescine/spermidine ABC transporter ATPase protein [KO:K11072] [EC:7.6.2.11]
UM146_11695  potB; spermidine/putrescine ABC transporter membrane protein [KO:K11071]
UM146_11700  potC; spermidine/putrescine ABC transporter membrane protein [KO:K11070]
UM146_11705  potD; spermidine/putrescine ABC transporter periplasmic substrate-binding protein [KO:K11069]
UM146_11730  [KO:K09808]
UM146_11735  lolD; lipoprotein transporter ATP-binding subunit [KO:K09810] [EC:7.6.2.-]
UM146_11740  [KO:K09808]
UM146_12300  [KO:K18895]
UM146_12875  ssuC; alkanesulfonate transporter permease subunit [KO:K15554]
UM146_12880  ssuB; aliphatic sulfonates transport ATP-binding subunit [KO:K15555] [EC:7.6.2.14]
UM146_12980  [KO:K11085] [EC:7.5.2.6]
UM146_13100  [KO:K16013]
UM146_13105  [KO:K16012]
UM146_13250  [KO:K05685] [EC:7.6.2.-]
UM146_13330  artP; arginine transporter ATP-binding subunit [KO:K10000] [EC:7.4.2.1]
UM146_13335  [KO:K09997]
UM146_13340  [KO:K09999]
UM146_13345  artM; arginine transporter permease subunit ArtM [KO:K09998]
UM146_13350  [KO:K09996]
UM146_13365  [KO:K11074]
UM146_13370  [KO:K11075]
UM146_13375  potG; putrescine transporter ATP-binding subunit [KO:K11076] [EC:7.6.2.16]
UM146_13380  [KO:K11073]
UM146_13490  [KO:K13891]
UM146_13495  [KO:K13890]
UM146_13500  [KO:K13889]
UM146_13505  [KO:K13892]
UM146_13590  glnH; glutamine ABC transporter periplasmic protein [KO:K10036]
UM146_13595  glnP; glutamine ABC transporter permease protein [KO:K10037]
UM146_13600  glnQ; glutamine ABC transporter ATP-binding protein [KO:K10038] [EC:7.4.2.1]
UM146_13830  modC; molybdate transporter ATP-binding protein [KO:K02017] [EC:7.3.2.5]
UM146_13835  modB; molybdate ABC transporter permease protein [KO:K02018]
UM146_13840  modA; molybdate transporter periplasmic protein [KO:K02020]
UM146_13855  [KO:K05776]
UM146_14275  [KO:K10001]
UM146_14280  [KO:K10003]
UM146_14285  [KO:K10002]
UM146_14290  [KO:K10004] [EC:7.4.2.1]
UM146_14545  [KO:K23185]
UM146_14555  [KO:K23186]
UM146_14560  [KO:K23187]
UM146_14565  [KO:K23188]
UM146_15110  [KO:K18890]
UM146_15115  [KO:K18889]
UM146_15525  [KO:K15552]
UM146_15530  tauB; taurine transporter ATP-binding subunit [KO:K10831] [EC:7.6.2.7]
UM146_15535  tauA; taurine transporter substrate binding subunit [KO:K15551]
UM146_17340  ugpC; glycerol-3-phosphate transporter ATP-binding subunit [KO:K05816] [EC:7.6.2.10]
UM146_17345  [KO:K05815]
UM146_17350  [KO:K05814]
UM146_17355  [KO:K05813]
UM146_17360  livF; leucine/isoleucine/valine transporter ATP-binding subunit [KO:K01996]
UM146_17365  livG; leucine/isoleucine/valine transporter ATP-binding subunit [KO:K01995]
UM146_17370  livM; leucine/isoleucine/valine transporter permease subunit [KO:K01998]
UM146_17375  [KO:K01997]
UM146_17380  [KO:K01999]
UM146_17395  [KO:K01999]
UM146_17435  ftsX; cell division protein FtsX [KO:K09811]
UM146_17440  [KO:K09812]
UM146_17505  [KO:K15584]
UM146_17510  [KO:K15585]
UM146_17515  nikC; nickel transporter permease NikC [KO:K15586]
UM146_17520  nikD; nickel transporter ATP-binding protein NikD [KO:K15587] [EC:7.2.2.11]
UM146_17525  nikE; nickel transporter ATP-binding protein NikE [KO:K10824] [EC:7.2.2.11]
UM146_17870  dppF; dipeptide transporter ATP-binding subunit [KO:K12372]
UM146_17875  dppD; dipeptide transporter ATP-binding subunit [KO:K12371]
UM146_17880  [KO:K12370]
UM146_17885  [KO:K12369]
UM146_17890  [KO:K12368]
UM146_18000  xylF; D-xylose transporter subunit XylF [KO:K10543]
UM146_18005  [KO:K10545] [EC:7.5.2.10]
UM146_18010  [KO:K10544]
UM146_18510  [KO:K02073]
UM146_18815  pstB; phosphate transporter ATP-binding protein [KO:K02036] [EC:7.3.2.1]
UM146_18820  pstA; phosphate transporter permease subunit PtsA [KO:K02038]
UM146_18825  pstC; phosphate transporter permease subunit PstC [KO:K02037]
UM146_18830  [KO:K02040]
UM146_18930  [KO:K06726] [EC:5.4.99.62]
UM146_18935  [KO:K10441] [EC:7.5.2.7]
UM146_18940  rbsC; ribose ABC transporter permease protein [KO:K10440]
UM146_18945  [KO:K10439]
UM146_19815  [KO:K23163]
UM146_20275  malG; maltose transporter permease [KO:K10110]
UM146_20280  malF; maltose transporter membrane protein [KO:K10109]
UM146_20285  malE; maltose ABC transporter periplasmic protein [KO:K10108]
UM146_20295  [KO:K10111] [EC:7.5.2.-]
UM146_20670  [KO:K10551] [EC:7.5.2.8]
UM146_20675  [KO:K10549]
UM146_20750  [KO:K02042]
UM146_20755  [KO:K02044]
UM146_20760  [KO:K02041] [EC:7.3.2.2]
UM146_21400  [KO:K23508]
UM146_21405  [KO:K10820] [EC:7.5.2.9]
UM146_21410  [KO:K23509]
UM146_21415  [KO:K23509]
UM146_21565  [KO:K07091]
UM146_21570  [KO:K11720]
UM146_21840  [KO:K11004]
UM146_23125  thiQ; thiamine transporter ATP-binding subunit [KO:K02062] [EC:7.6.2.15]
UM146_23130  thiP; thiamine transporter membrane protein [KO:K02063]
UM146_23135  tbpA; thiamine transporter substrate binding subunit [KO:K02064]
UM146_23570  [KO:K10829] [EC:7.2.2.16]
UM146_23575  [KO:K23227]
UM146_23580  [KO:K23228]
UM146_23605  [KO:K06858]
UM146_23795  metQ; DL-methionine transporter substrate-binding subunit [KO:K02073]
UM146_23800  [KO:K02072]
UM146_23805  metN; DL-methionine transporter ATP-binding subunit [KO:K02071]
Compound
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00032  Heme
C00034  Manganese
C00037  Glycine
C00038  Zinc cation
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00070  Copper
C00077  L-Ornithine
C00079  L-Phenylalanine
C00086  Urea
C00088  Nitrite
C00089  Sucrose
C00093  sn-Glycerol 3-phosphate
C00095  D-Fructose
C00098  Oligopeptide
C00107  Dipeptide
C00114  Choline
C00116  Glycerol
C00120  Biotin
C00121  D-Ribose
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00137  myo-Inositol
C00140  N-Acetyl-D-glucosamine
C00148  L-Proline
C00151  L-Amino acid
C00159  D-Mannose
C00175  Cobalt ion
C00181  D-Xylose
C00183  L-Valine
C00185  Cellobiose
C00188  L-Threonine
C00208  Maltose
C00212  Adenosine
C00243  Lactose
C00244  Nitrate
C00245  Taurine
C00255  Riboflavin
C00259  L-Arabinose
C00288  HCO3-
C00291  Nickel
C00294  Inosine
C00299  Uridine
C00315  Spermidine
C00320  Thiosulfate
C00330  Deoxyguanosine
C00333  D-Galacturonate
C00338  Lipopolysaccharide
C00378  Thiamine
C00379  Xylitol
C00387  Guanosine
C00392  Mannitol
C00407  L-Isoleucine
C00430  5-Aminolevulinate
C00470  Pectate
C00475  Cytidine
C00487  Carnitine
C00491  L-Cystine
C00492  Raffinose
C00503  Erythritol
C00526  Deoxyuridine
C00559  Deoxyadenosine
C00719  Betaine
C00794  D-Sorbitol
C00855  D-Methionine
C00865  Phospholipid
C00881  Deoxycytidine
C00919  Choline sulfate
C00973  Cyclomaltodextrin
C01083  alpha,alpha-Trehalose
C01153  Orthophosphoric monoester
C01157  Hydroxyproline
C01177  Inositol 1-phosphate
C01181  4-Trimethylammoniobutanoate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C01330  Sodium cation
C01417  Cyanate
C01487  D-Allose
C01606  Phthalate
C01630  Xylobiose
C01667  Bacitracin
C01674  Chitobiose
C01682  Nopaline
C01684  D-Rhamnose
C01762  Xanthosine
C01834  Lipoprotein
C01835  Maltotriose
C01935  Maltodextrin
C01946  Oleandomycin
C02160  Isomaltotriose
C02273  Digalacturonate
C03557  2-Aminoethylphosphonate
C03611  Galactose oligosaccharide
C03619  Methyl beta-D-galactoside
C04114  (E)-4-(Trimethylammonio)but-2-enoate
C04137  Octopine
C05349  Ciprofloxacin
C05402  Melibiose
C05512  Deoxyinosine
C05776  Vitamin B12
C06227  Fe(III)hydroxamate
C06229  Fe(III)dicitrate
C06230  Fe-enterobactin
C06232  Molybdate
C06687  Norfloxacin
C06705  Capsular polysaccharide
C06706  Lipo-oligosaccharide
C06707  Teichoic acid
C06767  Hemine
C07662  Sparfloxacin
C07663  Moxifloxacin
C11612  Polymyxin B
C13768  Colistin sulfate
C14818  Fe2+
C14819  Fe3+
C15521  Alkanesulfonate
C15719  Coelichelin
C16421  AI-2
C16692  Mannopine
C19609  Nickel(2+)
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570  alpha-1,5-L-Arabinobiose
C20571  alpha-1,5-L-Arabinotriose
C20572  alpha-1,5-L-Arabinotetraose
C20573  Aldotetraouronic acid
C20679  Tungstate
C21066  D-Galactofuranose
C22040  S-Methyl-L-cysteine
G00457  Maltotetraose
Reference
PMID:9799792
  Authors
Tomii K, Kanehisa M.
  Title
A comparative analysis of ABC transporters in complete microbial genomes.
  Journal
Genome Res 8:1048-59 (1998)
DOI:10.1101/gr.8.10.1048
Reference
  Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
  Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
J Bacteriol 190:4460-9 (2008)
DOI:10.1128/JB.00270-08
Reference
  Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
  Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
Proc Natl Acad Sci U S A 105:5537-42 (2008)
DOI:10.1073/pnas.0801196105
Reference
  Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
  Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
  Journal
Proc Natl Acad Sci U S A 96:13571-6 (1999)
DOI:10.1073/pnas.96.23.13571
Reference
  Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
  Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
  Journal
Genome Res 11:2034-40 (2001)
DOI:10.1101/gr.196301
Reference
  Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
  Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
  Journal
Mol Microbiol 57:1582-92 (2005)
DOI:10.1111/j.1365-2958.2005.04791.x
Reference
  Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
  Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
  Journal
Mol Microbiol 43:703-15 (2002)
DOI:10.1046/j.1365-2958.2002.02778.x
Reference
  Authors
Richard-Fogal CL, Frawley ER, Kranz RG
  Title
Topology and function of CcmD in cytochrome c maturation.
  Journal
J Bacteriol 190:3489-93 (2008)
DOI:10.1128/JB.00146-08
Reference
  Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
  Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
  Journal
J Bacteriol 187:5861-7 (2005)
DOI:10.1128/JB.187.17.5861-5867.2005
Reference
  Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
  Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
  Journal
J Bacteriol 189:8361-5 (2007)
DOI:10.1128/JB.01028-07
Reference
  Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
  Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
  Journal
Mol Microbiol 63:895-910 (2007)
DOI:10.1111/j.1365-2958.2006.05549.x
Reference
  Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
  Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
  Journal
J Bacteriol 190:7693-8 (2008)
DOI:10.1128/JB.00853-08
KO pathway
ko02010   

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