PATHWAY: eok02010 Help
Entry
Name
ABC transporters - Escherichia coli O55:H7 CB9615 (EPEC)
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
BRITE hierarchy
Pathway map
Other DBs
Organism
Escherichia coli O55:H7 CB9615 (EPEC) [GN:
eok ]
Gene
G2583_0070 thiP; Thiamine/thiamine pyrophosphate ABC transporter, permease protein [KO:K02063 ]
G2583_0071 tbpA; Thiamine/thiamine pyrophosphate ABC transporter, periplasmic thiamine/thiamine pyrophospate-binding protein [KO:K02064 ]
G2583_0202 metI; D-methionine transport system permease protein metI [KO:K02072 ]
G2583_0472 afuB; Binding-protein-dependent transport systems inner membrane component [KO:K02011 ]
G2583_0479 tauC; ABC-type nitrate/sulfonate/bicarbonate transpo rt system, permease component [KO:K15552 ]
G2583_0753 fepD; ABC-type Fe3+-siderophore transport system, permease component [KO:K23186 ]
G2583_0755 fepB; Ferrienterobactin ABC transporter, ferrienterobactin-binding periplasmic protein FepB [KO:K23185 ]
G2583_0816 gltK; Glutamate/aspartate transport system permease protein gltK [KO:K10002 ]
G2583_0817 gltJ; Glutamate/aspartate ABC transporter, permease protein GltJ [KO:K10003 ]
G2583_0929 modA; Molybdate ABC transporter, periplasmic molybdate-binding protein [KO:K02020 ]
G2583_0930 modB; ABC-type molybdate transport system, permease component [KO:K02018 ]
G2583_1057 gsiA; Glutathione ABC transporter, ATP-binding protein GsiA [KO:K13892 ]
G2583_1085 potF; Putrescine ABC transporter, periplasmic putrescine-binding protein [KO:K11073 ]
G2583_1094 artJ; Arginine 3rd transport system periplasmic binding protein [KO:K09996 ]
G2583_1097 artI; Arginine ABC transporter, periplasmic arginine-binding protein ArtI [KO:K09997 ]
G2583_1116 macB; Macrolide-specific ABC-type efflux carrier protein MacB [KO:K05685 ] [EC:7.6.2.-]
G2583_1123 cydC; ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC [KO:K16012 ]
G2583_1124 cydD; ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD [KO:K16013 ]
G2583_1169 ssuC; Putative sulfonate ABC transporter, permease protein [KO:K15554 ]
G2583_1171 ssuA; ABC transporter, periplasmic substrate-binding protein, aliphatic sulfonates family [KO:K15553 ]
G2583_1376 lolC; outer membrane-specific lipoprotein transporter subunit LolC [KO:K09808 ]
G2583_1378 lolE; Lipoprotein releasing system, transmembrane protein LolE [KO:K09808 ]
G2583_1381 potD; Spermidine/putrescine-binding periplasmic protein precursor [KO:K11069 ]
G2583_1383 potB; Spermidine/putrescine ABC transporter, permease protein PotB [KO:K11071 ]
G2583_1516 oppB; Oligopeptide transport system permease protein oppB [KO:K15581 ]
G2583_1517 oppC; Oligopeptide transport system permease protein oppC [KO:K15582 ]
G2583_1518 oppD; Oligopeptide ABC transporter, ATP-binding protein OppD [KO:K15583 ]
G2583_1519 oppF; Oligopeptide ABC transporter, ATP-binding protein OppF [KO:K10823 ]
G2583_1665 ycjV; Uncharacterized ABC transporter ATP-binding protein ycjV [KO:K10112 ] [EC:7.5.2.-]
G2583_1878 lsrA; Autoinducer-2 ABC transporter, ATP-binding protein LsrA [KO:K10558 ]
G2583_1879 lsrC; Autoinducer-2 ABC transporter, permease protein LsrC [KO:K10556 ]
G2583_1880 lsrD; Autoinducer-2 ABC transporter, permease protein LsrD [KO:K10557 ]
G2583_1881 lsrB; Autoinducer-2 ABC transporter, periplasmic autoinducer-2-binding protein LsrB [KO:K10555 ]
G2583_2349 araH; ABC-type arabinose transport system, permease component [KO:K10538 ]
G2583_2665 yehW; ABC transporter, quaternary amine uptake (QAT) family, permease protein [KO:K05846 ]
G2583_2666 yehX; ABC transporter, quaternary amine uptake (QAT) family, ATP-binding protein [KO:K05847 ] [EC:7.6.2.9 ]
G2583_2667 yehY; ABC transporter, quaternary amine uptake (QAT) family, permease protein [KO:K05846 ]
G2583_2668 osmF; Substrate-binding region of ABC-type glycine betaine transport system precursor [KO:K05845 ]
G2583_2693 mglB; Galactose ABC transporter, periplasmic galactose-binding protein [KO:K10540 ]
G2583_2720 yejA; ABC transporter, periplasmic solute-binding protein [KO:K13893 ]
G2583_2721 yejB; Inner membrane ABC transporter permease protein yejB [KO:K13894 ]
G2583_2845 hisQ; ABC-type arginine transport system, permease component [KO:K10016 ]
G2583_2847 argT; Lysine-arginine-ornithine-binding periplasmic protein precursor [KO:K10013 ]
G2583_2956 cysP; Sulfate/thiosulfate ABC transporter, periplasmic sulfate/thiosulfate-binding protein [KO:K02048 ]
G2583_3077 yphE; Putative sugar ABC transporter, ATP-binding protein [KO:K23547 ]
G2583_3078 yphF; Periplasmic binding protein/LacI transcriptional regulator precursor [KO:K23545 ]
G2583_3326 proW; Glycine betaine/L-proline ABC transporter, permease protein [KO:K02001 ]
G2583_3327 proX; Glycine betaine-binding periplasmic protein precursor [KO:K02002 ]
G2583_3920 yrbF; Uncharacterized ABC transporter ATP-binding protein yrbF [KO:K02065 ]
G2583_3987 yhdW; Putative amino-acid ABC transporter-binding protein yhdW precursor [KO:K09969 ]
G2583_3988 yhdX; Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [KO:K09970 ]
G2583_4151 ugpE; sn-glycerol-3-phosphate transport system permease protein ugpE [KO:K05815 ]
G2583_4152 ugpA; sn-glycerol-3-phosphate transport system permease protein ugpA [KO:K05814 ]
G2583_4153 ugpB; sn-glycerol-3-phosphate-binding periplasmic protein ugpB precursor [KO:K05813 ]
G2583_4156 livG; High-affinity branched-chain amino acid transport ATP-binding protein livG [KO:K01995 ]
G2583_4157 livM; High-affinity branched-chain amino acid ABC transporter, permease protein LivM [KO:K01998 ]
G2583_4158 livH; High-affinity branched-chain amino acid transport system permease protein livH [KO:K01997 ]
G2583_4159 livK; High-affinity branched-chain amino acid ABC transporter, periplasmic leucine-specific-binding protein LivK [KO:K01999 ]
G2583_4163 livJ; High-affinity amino acid transport protein, periplasmic binding protein [KO:K01999 ]
G2583_4197 nikA; Nickel ABC transporter, periplasmic nickel-binding protein NikA [KO:K15584 ]
G2583_4277 dppF; ABC-type oligopeptide transport system, ATPase component [KO:K12372 ]
G2583_4281 dppA; Dipeptide ABC transporter, periplasmic dipeptide-binding protein [KO:K12368 ]
G2583_4518 pstS; Phosphate ABC transporter, periplasmic phosphate-binding protein PstS [KO:K02040 ]
G2583_4860 malK; Maltose/maltodextrin import ATP-binding protein malK [KO:K10111 ] [EC:7.5.2.-]
G2583_4931 phnD; Phosphonate ABC transporter, periplasmic phosphonate-binding protein [KO:K02044 ]
G2583_5057 ytfQ; Putative sugar ABC transporter, periplasmic sugar-binding protein [KO:K23508 ]
Compound
C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference
Authors
Tomii K, Kanehisa M.
Title
A comparative analysis of ABC transporters in complete microbial genomes.
Journal
Reference
Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal
Reference
Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal
Reference
Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal
Reference
Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal
Reference
Authors
Richard-Fogal CL, Frawley ER, Kranz RG
Title
Topology and function of CcmD in cytochrome c maturation.
Journal
Reference
Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal
Reference
Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal
Reference
Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal
Reference
Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal
KO pathway