KEGG   PATHWAY: gaf00512
Entry
gaf00512                    Pathway                                
Name
Mucin type O-glycan biosynthesis - Gambusia affinis (western mosquitofish)
Description
O-glycans are a class of glycans that modify serine or threonine residues of proteins. Biosynthesis of O-glycans starts from the transfer of N-acetylgalactosamine (GalNAc) to serine or threonine. The first GalNAc may be extended with sugars including galactose, N-acetylglucosamine, fucose, or sialic acid, but not mannose, glucose, or xylose. Depending on the sugars added, there are four common O-glycan core structures, cores 1 through 4, and an additional four, cores 5 though 8. Mucins are highly O-glycosylated glycoproteins ubiquitous in mucous secretions on cell surfaces and in body fluids. Mucin O-glycans can be branched, and many sugars or groups of sugars are antigenic. Important modifications of mucin O-glycans include O-acetylation of sialic acid and O-sulfation of galactose and N-acetylglucosamine.
Class
Metabolism; Glycan biosynthesis and metabolism
Pathway map
gaf00512  Mucin type O-glycan biosynthesis
gaf00512

Other DBs
GO: 0006493
Organism
Gambusia affinis (western mosquitofish) [GN:gaf]
Gene
122846106  galnt16; polypeptide N-acetylgalactosaminyltransferase 16 [KO:K00710] [EC:2.4.1.41]
122842283  galnt2; polypeptide N-acetylgalactosaminyltransferase 2 [KO:K00710] [EC:2.4.1.41]
122844722  polypeptide N-acetylgalactosaminyltransferase 10-like [KO:K00710] [EC:2.4.1.41]
122845136  polypeptide N-acetylgalactosaminyltransferase 10-like [KO:K00710] [EC:2.4.1.41]
122824507  galnt11; polypeptide N-acetylgalactosaminyltransferase 11 isoform X1 [KO:K00710] [EC:2.4.1.41]
122831323  galnt1; polypeptide N-acetylgalactosaminyltransferase 1 [KO:K00710] [EC:2.4.1.41]
122825444  galnt14; polypeptide N-acetylgalactosaminyltransferase 14 isoform X1 [KO:K00710] [EC:2.4.1.41]
122826203  probable polypeptide N-acetylgalactosaminyltransferase 8 isoform X1 [KO:K00710] [EC:2.4.1.41]
122832881  galnt17; polypeptide N-acetylgalactosaminyltransferase 17 isoform X1 [KO:K00710] [EC:2.4.1.41]
122837606  galnt6; polypeptide N-acetylgalactosaminyltransferase 6 [KO:K00710] [EC:2.4.1.41]
122819637  galnt18b; polypeptide N-acetylgalactosaminyltransferase 18 [KO:K00710] [EC:2.4.1.41]
122827774  galnt9; polypeptide N-acetylgalactosaminyltransferase 9 isoform X1 [KO:K00710] [EC:2.4.1.41]
122839104  polypeptide N-acetylgalactosaminyltransferase 6-like isoform X1 [KO:K00710] [EC:2.4.1.41]
122839607  galnt3; polypeptide N-acetylgalactosaminyltransferase 3 [KO:K00710] [EC:2.4.1.41]
122835129  probable polypeptide N-acetylgalactosaminyltransferase 8 isoform X1 [KO:K00710] [EC:2.4.1.41]
122840036  polypeptide N-acetylgalactosaminyltransferase 5 [KO:K00710] [EC:2.4.1.41]
122835547  probable polypeptide N-acetylgalactosaminyltransferase 8 [KO:K00710] [EC:2.4.1.41]
122840098  galnt13; polypeptide N-acetylgalactosaminyltransferase 13 isoform X1 [KO:K00710] [EC:2.4.1.41]
122829163  galnt7; N-acetylgalactosaminyltransferase 7 isoform X1 [KO:K00710] [EC:2.4.1.41]
122835809  polypeptide N-acetylgalactosaminyltransferase 18-like isoform X1 [KO:K00710] [EC:2.4.1.41]
122843697  poc1bl; polypeptide N-acetylgalactosaminyltransferase 4 [KO:K00710] [EC:2.4.1.41]
122843699  galnt12; polypeptide N-acetylgalactosaminyltransferase 12 [KO:K00710] [EC:2.4.1.41]
122830784  c1galt1a; glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-A isoform X1 [KO:K00731] [EC:2.4.1.122]
122834728  c1galt1b; glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B [KO:K00731] [EC:2.4.1.122]
122843788  si:dkey-202e17.1; glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [KO:K00731] [EC:2.4.1.122]
122837493  c1galt1c1; C1GALT1-specific chaperone 1 [KO:K09653]
122828439  LOW QUALITY PROTEIN: beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase-like [KO:K00727] [EC:2.4.1.102]
122835067  gcnt3; beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3 [KO:K09662] [EC:2.4.1.-]
122847282  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4-like [KO:K09663] [EC:2.4.1.-]
122843348  CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 1-like [KO:K00780] [EC:2.4.3.2 2.4.3.4]
122836133  st3gal2; CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 2 [KO:K03368] [EC:2.4.3.2 2.4.3.4]
122823307  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1-like isoform X1 [KO:K03479] [EC:2.4.3.3]
122823308  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1-like [KO:K03479] [EC:2.4.3.3]
122823388  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1-like [KO:K03479] [EC:2.4.3.3]
122823339  st6galnac; alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 isoform X1 [KO:K06616] [EC:2.4.3.3]
122840894  st6galnac3; alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 isoform X1 [KO:K03373] [EC:2.4.3.7]
122846780  st6galnac4; alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase isoform X1 [KO:K03374] [EC:2.4.3.7]
122842547  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3-like [KO:K07970] [EC:2.4.1.146 2.4.1.149]
122845157  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3-like [KO:K07970] [EC:2.4.1.146 2.4.1.149]
122838849  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3-like [KO:K07970] [EC:2.4.1.146 2.4.1.149]
122838850  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3-like [KO:K07970] [EC:2.4.1.146 2.4.1.149]
122829793  b4galt5; beta-1,4-galactosyltransferase 5 isoform X1 [KO:K09905] [EC:2.4.1.274 2.4.1.-]
Compound
C02189  [Protein]-L-serine
G00023  Tn antigen
G00024  Thomsen-Friedenreich antigen
G00025   
G00026  Sialyl T antigen
G00027   
G00028   
G00029   
G00030   
G00031   
G00032   
G00033   
G00034   
G00035  Sialyl-Tn antigen
G10611  UDP-N-acetyl-D-galactosamine
G10794   
G13153   
Reference
  Authors
Brockhausen I.
  Title
Pathways of O-glycan biosynthesis in cancer cells.
  Journal
Biochim Biophys Acta 1473:67-95 (1999)
DOI:10.1016/S0304-4165(99)00170-1
Reference
  Authors
Iwai T, Inaba N, Naundorf A, Zhang Y, Gotoh M, Iwasaki H, Kudo T, Togayachi A, Ishizuka Y, Nakanishi H, Narimatsu H.
  Title
Molecular cloning and characterization of a novel UDP-GlcNAc:GalNAc-peptide beta1,3-N-acetylglucosaminyltransferase (beta 3Gn-T6), an enzyme synthesizing the core 3 structure of O-glycans.
  Journal
J Biol Chem 277:12802-9 (2002)
DOI:10.1074/jbc.M112457200
Reference
  Authors
Korekane H, Taguchi T, Sakamoto Y, Honke K, Dohmae N, Salminen H, Toivonen S, Helin J, Takio K, Renkonen O, Taniguchi N.
  Title
Purification and cDNA cloning of UDP-GlcNAc:GlcNAcbeta1-3Galbeta1-4Glc(NAc)-R [GlcNAc to Gal]beta1,6N-acetylglucosaminyltransferase from rat small intestine: a major carrier of dIGnT activity in rat small intestine.
  Journal
Glycobiology 13:387-400 (2003)
DOI:10.1093/glycob/cwg044
Reference
  Authors
van Die I, van Tetering A, Schiphorst WE, Sato T, Furukawa K, van den Eijnden DH.
  Title
The acceptor substrate specificity of human beta4-galactosyltransferase V indicates its potential function in O-glycosylation.
  Journal
FEBS Lett 450:52-6 (1999)
DOI:10.1016/S0014-5793(99)00462-7
Reference
  Authors
Marcos NT, Pinho S, Grandela C, Cruz A, Samyn-Petit B, Harduin-Lepers A, Almeida R, Silva F, Morais V, Costa J, Kihlberg J, Clausen H, Reis CA
  Title
Role of the human ST6GalNAc-I and ST6GalNAc-II in the synthesis of the cancer-associated sialyl-Tn antigen.
  Journal
Cancer Res 64:7050-7 (2004)
DOI:10.1158/0008-5472.CAN-04-1921
Reference
  Authors
Lee YC, Kaufmann M, Kitazume-Kawaguchi S, Kono M, Takashima S, Kurosawa N, Liu H, Pircher H, Tsuji S
  Title
Molecular cloning and functional expression of two members of mouse NeuAcalpha2,3Galbeta1,3GalNAc GalNAcalpha2,6-sialyltransferase family, ST6GalNAc  III and IV.
  Journal
J Biol Chem 274:11958-67 (1999)
DOI:10.1074/jbc.274.17.11958
Reference
  Authors
Kudelka MR, Ju T, Heimburg-Molinaro J, Cummings RD
  Title
Simple sugars to complex disease--mucin-type O-glycans in cancer.
  Journal
Adv Cancer Res 126:53-135 (2015)
DOI:10.1016/bs.acr.2014.11.002
Reference
  Authors
Yeh JC, Hiraoka N, Petryniak B, Nakayama J, Ellies LG, Rabuka D, Hindsgaul O, Marth JD, Lowe JB, Fukuda M
  Title
Novel sulfated lymphocyte homing receptors and their control by a Core1 extension beta 1,3-N-acetylglucosaminyltransferase.
  Journal
Cell 105:957-69 (2001)
DOI:10.1016/S0092-8674(01)00394-4
Related
pathway
gaf00533  Glycosaminoglycan biosynthesis - keratan sulfate
KO pathway
ko00512   
LinkDB

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