Homo sapiens (human): 1277 Help Entry 1277              CDS       T01001                                  Symbol COL1A1, CAFYD, EDSARTH1, EDSC, OI1, OI2, OI3, OI4 Name (RefSeq) collagen type I alpha 1 chain   KO K06236   collagen type I alpha Organism hsa  Homo sapiens (human) Pathway hsa04151   PI3K-Akt signaling pathway hsa04510   Focal adhesion hsa04512   ECM-receptor interaction hsa04611   Platelet activation hsa04820   Cytoskeleton in muscle cells hsa04926   Relaxin signaling pathway hsa04933   AGE-RAGE signaling pathway in diabetic complications hsa04974   Protein digestion and absorption hsa05146   Amoebiasis hsa05165   Human papillomavirus infection hsa05205   Proteoglycans in cancer hsa05415   Diabetic cardiomyopathy Network nt06539  Cytoskeleton in muscle cells   Element N01814   Extracellular matrix - Basal lamina Disease H00506   Osteogenesis imperfecta H00613   Infantile cortical hyperostosis H01593   Osteoporosis H02243   Ehlers-Danlos syndrome arthrochalasia type H02724   Combined osteogenesis imperfecta and Ehlers-Danlos syndrome Brite KEGG Orthology (KO) [BR:hsa00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     1277 (COL1A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     1277 (COL1A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     1277 (COL1A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     1277 (COL1A1)  09150 Organismal Systems   09151 Immune system    04611 Platelet activation     1277 (COL1A1)   09152 Endocrine system    04926 Relaxin signaling pathway     1277 (COL1A1)   09154 Digestive system    04974 Protein digestion and absorption     1277 (COL1A1)  09160 Human Diseases   09161 Cancer: overview    05205 Proteoglycans in cancer     1277 (COL1A1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     1277 (COL1A1)   09174 Infectious disease: parasitic    05146 Amoebiasis     1277 (COL1A1)   09166 Cardiovascular disease    05415 Diabetic cardiomyopathy     1277 (COL1A1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     1277 (COL1A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:hsa00536]     1277 (COL1A1) Glycosaminoglycan binding proteins [BR:hsa00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    1277 (COL1A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  1277 NCBI-ProteinID:  NP_000079 OMIM:  120150 HGNC:  2197 Ensembl:  ENSG00000108821 UniProt:  P02452 Structure PDB LinkDB All DBs Position 17:complement(50184101..50201631) Genome browser AA seq 1464 aa AA seqDB search MFSFVDLRLLLLLAATALLTHGQEEGQVEGQDEDIPPITCVQNGLRYHDRDVWKPEPCRI CVCDNGKVLCDDVICDETKNCPGAEVPEGECCPVCPDGSESPTDQETTGVEGPKGDTGPR GPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGP MGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGR PGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQ MGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGP RGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGP QGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGL PGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGL TGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGV PGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGE QGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGS QGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGD KGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGP PGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGP AGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGV VGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGA EGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGP VGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGP RGPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSAGFDFSF LPQPPQEKAHDGGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCR DLKMCHSDWKSGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPSVAQKNWYISKNPKD KRHVWFGESMTDGFQFEYGGQGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQ TGNLKKALLLQGSNEIEIRAEGNSRFTYSVTVDGCTSHTGAWGKTVIEYKTTKTSRLPII DVAPLDVGAPDQEFGFDVGPVCFL NT seq 4395 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttgtggacctccggctcctgctcctcttagcggccaccgccctcctgacg cacggccaagaggaaggccaagtcgagggccaagacgaagacatcccaccaatcacctgc gtacagaacggcctcaggtaccatgaccgagacgtgtggaaacccgagccctgccggatc tgcgtctgcgacaacggcaaggtgttgtgcgatgacgtgatctgtgacgagaccaagaac tgccccggcgccgaagtccccgagggcgagtgctgtcccgtctgccccgacggctcagag tcacccaccgaccaagaaaccaccggcgtcgagggacccaagggagacactggcccccga ggcccaaggggacccgcaggcccccctggccgagatggcatccctggacagcctggactt cccggaccccccggaccccccggacctcccggaccccctggcctcggaggaaactttgct ccccagctgtcttatggctatgatgagaaatcaaccggaggaatttccgtgcctggcccc atgggtccctctggtcctcgtggtctccctggcccccctggtgcacctggtccccaaggc ttccaaggtccccctggtgagcctggcgagcctggagcttcaggtcccatgggtccccga ggtcccccaggtccccctggaaagaatggagatgatggggaagctggaaaacctggtcgt cctggtgagcgtgggcctcctgggcctcagggtgctcgaggattgcccggaacagctggc ctccctggaatgaagggacacagaggtttcagtggtttggatggtgccaagggagatgct ggtcctgctggtcctaagggtgagcctggcagccctggtgaaaatggagctcctggtcag atgggcccccgtggcctgcctggtgagagaggtcgccctggagcccctggccctgctggt gctcgtggaaatgatggtgctactggtgctgccgggccccctggtcccaccggccccgct ggtcctcctggcttccctggtgctgttggtgctaagggtgaagctggtccccaagggccc cgaggctctgaaggtccccagggtgtgcgtggtgagcctggcccccctggccctgctggt gctgctggccctgctggaaaccctggtgctgatggacagcctggtgctaaaggtgccaat ggtgctcctggtattgctggtgctcctggcttccctggtgcccgaggcccctctggaccc cagggccccggcggccctcctggtcccaagggtaacagcggtgaacctggtgctcctggc agcaaaggagacactggtgctaagggagagcctggccctgttggtgttcaaggaccccct ggccctgctggagaggaaggaaagcgaggagctcgaggtgaacccggacccactggcctg cccggaccccctggcgagcgtggtggacctggtagccgtggtttccctggcgcagatggt gttgctggtcccaagggtcccgctggtgaacgtggttctcctggccctgctggccccaaa ggatctcctggtgaagctggtcgtcccggtgaagctggtctgcctggtgccaagggtctg actggaagccctggcagccctggtcctgatggcaaaactggcccccctggtcccgccggt caagatggtcgccccggacccccaggcccacctggtgcccgtggtcaggctggtgtgatg ggattccctggacctaaaggtgctgctggagagcccggcaaggctggagagcgaggtgtt cccggaccccctggcgctgtcggtcctgctggcaaagatggagaggctggagctcaggga ccccctggccctgctggtcccgctggcgagagaggtgaacaaggccctgctggctccccc ggattccagggtctccctggtcctgctggtcctccaggtgaagcaggcaaacctggtgaa cagggtgttcctggagaccttggcgcccctggcccctctggagcaagaggcgagagaggt ttccctggcgagcgtggtgtgcaaggtccccctggtcctgctggtccccgaggggccaac ggtgctcccggcaacgatggtgctaagggtgatgctggtgcccctggagctcccggtagc cagggcgcccctggccttcagggaatgcctggtgaacgtggtgcagctggtcttccaggg cctaagggtgacagaggtgatgctggtcccaaaggtgctgatggctctcctggcaaagat ggcgtccgtggtctgactggccccattggtcctcctggccctgctggtgcccctggtgac aagggtgaaagtggtcccagcggccctgctggtcccactggagctcgtggtgcccccgga gaccgtggtgagcctggtccccccggccctgctggctttgctggcccccctggtgctgac ggccaacctggtgctaaaggcgaacctggtgatgctggtgctaaaggcgatgctggtccc cctggccctgccggacccgctggaccccctggccccattggtaatgttggtgctcctgga gccaaaggtgctcgcggcagcgctggtccccctggtgctactggtttccctggtgctgct ggccgagtcggtcctcctggcccctctggaaatgctggaccccctggccctcctggtcct gctggcaaagaaggcggcaaaggtccccgtggtgagactggccctgctggacgtcctggt gaagttggtccccctggtccccctggccctgctggcgagaaaggatcccctggtgctgat ggtcctgctggtgctcctggtactcccgggcctcaaggtattgctggacagcgtggtgtg gtcggcctgcctggtcagagaggagagagaggcttccctggtcttcctggcccctctggt gaacctggcaaacaaggtccctctggagcaagtggtgaacgtggtccccctggtcccatg ggcccccctggattggctggaccccctggtgaatctggacgtgagggggctcctggtgcc gaaggttcccctggacgagacggttctcctggcgccaagggtgaccgtggtgagaccggc cccgctggaccccctggtgctcctggtgctcctggtgcccctggccccgttggccctgct ggcaagagtggtgatcgtggtgagactggtcctgctggtcccgccggtcctgtcggccct gttggcgcccgtggccccgccggaccccaaggcccccgtggtgacaagggtgagacaggc gaacagggcgacagaggcataaagggtcaccgtggcttctctggcctccagggtccccct ggccctcctggctctcctggtgaacaaggtccctctggagcctctggtcctgctggtccc cgaggtccccctggctctgctggtgctcctggcaaagatggactcaacggtctccctggc cccattgggccccctggtcctcgcggtcgcactggtgatgctggtcctgttggtcccccc ggccctcctggacctcctggtccccctggtcctcccagcgctggtttcgacttcagcttc ctgccccagccacctcaagagaaggctcacgatggtggccgctactaccgggctgatgat gccaatgtggttcgtgaccgtgacctcgaggtggacaccaccctcaagagcctgagccag cagatcgagaacatccggagcccagagggcagccgcaagaaccccgcccgcacctgccgt gacctcaagatgtgccactctgactggaagagtggagagtactggattgaccccaaccaa ggctgcaacctggatgccatcaaagtcttctgcaacatggagactggtgagacctgcgtg taccccactcagcccagtgtggcccagaagaactggtacatcagcaagaaccccaaggac aagaggcatgtctggttcggcgagagcatgaccgatggattccagttcgagtatggcggc cagggctccgaccctgccgatgtggccatccagctgaccttcctgcgcctgatgtccacc gaggcctcccagaacatcacctaccactgcaagaacagcgtggcctacatggaccagcag actggcaacctcaagaaggccctgctcctccagggctccaacgagatcgagatccgcgcc gagggcaacagccgcttcacctacagcgtcactgtcgatggctgcacgagtcacaccgga gcctggggcaagacagtgattgaatacaaaaccaccaagacctcccgcctgcccatcatc gatgtggcccccttggacgttggtgccccagaccaggaattcggcttcgacgttggccct gtctgcttcctgtaa

Homo sapiens (human): 1278 Help Entry 1278              CDS       T01001                                  Symbol COL1A2, EDSARTH2, EDSCV, OI4 Name (RefSeq) collagen type I alpha 2 chain   KO K06236   collagen type I alpha Organism hsa  Homo sapiens (human) Pathway hsa04151   PI3K-Akt signaling pathway hsa04510   Focal adhesion hsa04512   ECM-receptor interaction hsa04611   Platelet activation hsa04820   Cytoskeleton in muscle cells hsa04926   Relaxin signaling pathway hsa04933   AGE-RAGE signaling pathway in diabetic complications hsa04974   Protein digestion and absorption hsa05146   Amoebiasis hsa05165   Human papillomavirus infection hsa05205   Proteoglycans in cancer hsa05415   Diabetic cardiomyopathy Network nt06539  Cytoskeleton in muscle cells   Element N01814   Extracellular matrix - Basal lamina Disease H00506   Osteogenesis imperfecta H01593   Osteoporosis H02241   Ehlers-Danlos syndrome cardiac valvular type H02243   Ehlers-Danlos syndrome arthrochalasia type H02724   Combined osteogenesis imperfecta and Ehlers-Danlos syndrome Brite KEGG Orthology (KO) [BR:hsa00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     1278 (COL1A2)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     1278 (COL1A2)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     1278 (COL1A2)   09142 Cell motility    04820 Cytoskeleton in muscle cells     1278 (COL1A2)  09150 Organismal Systems   09151 Immune system    04611 Platelet activation     1278 (COL1A2)   09152 Endocrine system    04926 Relaxin signaling pathway     1278 (COL1A2)   09154 Digestive system    04974 Protein digestion and absorption     1278 (COL1A2)  09160 Human Diseases   09161 Cancer: overview    05205 Proteoglycans in cancer     1278 (COL1A2)   09172 Infectious disease: viral    05165 Human papillomavirus infection     1278 (COL1A2)   09174 Infectious disease: parasitic    05146 Amoebiasis     1278 (COL1A2)   09166 Cardiovascular disease    05415 Diabetic cardiomyopathy     1278 (COL1A2)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     1278 (COL1A2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:hsa00536]     1278 (COL1A2) Glycosaminoglycan binding proteins [BR:hsa00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    1278 (COL1A2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  1278 NCBI-ProteinID:  NP_000080 OMIM:  120160 HGNC:  2198 Ensembl:  ENSG00000164692 UniProt:  P08123 A0A0S2Z3H5 Structure PDB LinkDB All DBs Position 7:94394895..94431227 Genome browser AA seq 1366 aa AA seqDB search MLSFVDTRTLLLLAVTLCLATCQSLQEETVRKGPAGDRGPRGERGPPGPPGRDGEDGPTG PPGPPGPPGPPGLGGNFAAQYDGKGVGLGPGPMGLMGPRGPPGAAGAPGPQGFQGPAGEP GEPGQTGPAGARGPAGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIR GHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGSV GPVGPAGPIGSAGPPGFPGAPGPKGEIGAVGNAGPAGPAGPRGEVGLPGLSGPVGPPGNP GANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGESGNK GEPGSAGPQGPPGPSGEEGKRGPNGEAGSAGPPGPPGLRGSPGSRGLPGADGRAGVMGPP GSRGASGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNIGPAGKEGPVGLPGIDGRPGPI GPAGARGEPGNIGFPGPKGPTGDPGKNGDKGHAGLAGARGAPGPDGNNGAQGPPGPQGVQ GGKGEQGPPGPPGFQGLPGPSGPAGEVGKPGERGLHGEFGLPGPAGPRGERGPPGESGAA GPTGPIGSRGPSGPPGPDGNKGEPGVVGAVGTAGPSGPSGLPGERGAAGIPGGKGEKGEP GLRGEIGNPGRDGARGAPGAVGAPGPAGATGDRGEAGAAGPAGPAGPRGSPGERGEVGPA GPNGFAGPAGAAGQPGAKGERGAKGPKGENGVVGPTGPVGAAGPAGPNGPPGPAGSRGDG GPPGMTGFPGAAGRTGPPGPSGISGPPGPPGPAGKEGLRGPRGDQGPVGRTGEVGAVGPP GFAGEKGPSGEAGTAGPPGTPGPQGLLGAPGILGLPGSRGERGLPGVAGAVGEPGPLGIA GPPGARGPPGAVGSPGVNGAPGEAGRDGNPGNDGPPGRDGQPGHKGERGYPGNIGPVGAA GAPGPHGPVGPAGKHGNRGETGPSGPVGPAGAVGPRGPSGPQGIRGDKGEPGEKGPRGLP GLKGHNGLQGLPGIAGHHGDQGAPGSVGPAGPRGPAGPSGPAGKDGRTGHPGTVGPAGIR GPQGHQGPAGPPGPPGPPGPPGVSGGGYDFGYDGDFYRADQPRSAPSLRPKDYEVDATLK SLNNQIETLLTPEGSRKNPARTCRDLRLSHPEWSSGYYWIDPNQGCTMDAIKVYCDFSTG ETCIRAQPENIPAKNWYRSSKDKKHVWLGETINAGSQFEYNVEGVTSKEMATQLAFMRLL ANYASQNITYHCKNSIAYMDEETGNLKKAVILQGSNDVELVAEGNSRFTYTVLVDGCSKK TNEWGKTIIEYKTNKPSRLPFLDIAPLDIGGADQEFFVDIGPVCFK NT seq 4101 nt NT seq  +upstreamnt  +downstreamnt atgctcagctttgtggatacgcggactttgttgctgcttgcagtaaccttatgcctagca acatgccaatctttacaagaggaaactgtaagaaagggcccagccggagatagaggacca cgtggagaaaggggtccaccaggccccccaggcagagatggtgaagatggtcccacaggc cctcctggtccacctggtcctcctggcccccctggtctcggtgggaactttgctgctcag tatgatggaaaaggagttggacttggccctggaccaatgggcttaatgggacctagaggc ccacctggtgcagctggagccccaggccctcaaggtttccaaggacctgctggtgagcct ggtgaacctggtcaaactggtcctgcaggtgctcgtggtccagctggccctcctggcaag gctggtgaagatggtcaccctggaaaacccggacgacctggtgagagaggagttgttgga ccacagggtgctcgtggtttccctggaactcctggacttcctggcttcaaaggcattagg ggacacaatggtctggatggattgaagggacagcccggtgctcctggtgtgaagggtgaa cctggtgcccctggtgaaaatggaactccaggtcaaacaggagcccgtgggcttcctggt gagagaggacgtgttggtgcccctggcccagctggtgcccgtggcagtgatggaagtgtg ggtcccgtgggtcctgctggtcccattgggtctgctggccctccaggcttcccaggtgcc cctggccccaagggtgaaattggagctgttggtaacgctggtcctgctggtcccgccggt ccccgtggtgaagtgggtcttccaggcctctccggccccgttggacctcctggtaatcct ggagcaaacggccttactggtgccaagggtgctgctggccttcccggcgttgctggggct cccggcctccctggaccccgcggtattcctggccctgttggtgctgccggtgctactggt gccagaggacttgttggtgagcctggtccagctggctccaaaggagagagcggtaacaag ggtgagcccggctctgctgggccccaaggtcctcctggtcccagtggtgaagaaggaaag agaggccctaatggggaagctggatctgccggccctccaggacctcctgggctgagaggt agtcctggttctcgtggtcttcctggagctgatggcagagctggcgtcatgggccctcct ggtagtcgtggtgcaagtggccctgctggagtccgaggacctaatggagatgctggtcgc cctggggagcctggtctcatgggacccagaggtcttcctggttcccctggaaatatcggc cccgctggaaaagaaggtcctgtcggcctccctggcatcgacggcaggcctggcccaatt ggcccagctggagcaagaggagagcctggcaacattggattccctggacccaaaggcccc actggtgatcctggcaaaaacggtgataaaggtcatgctggtcttgctggtgctcggggt gctccaggtcctgatggaaacaatggtgctcagggacctcctggaccacagggtgttcaa ggtggaaaaggtgaacagggtccccctggtcctccaggcttccagggtctgcctggcccc tcaggtcccgctggtgaagttggcaaaccaggagaaaggggtctccatggtgagtttggt ctccctggtcctgctggtccaagaggggaacgcggtcccccaggtgagagtggtgctgcc ggtcctactggtcctattggaagccgaggtccttctggacccccagggcctgatggaaac aagggtgaacctggtgtggttggtgctgtgggcactgctggtccatctggtcctagtgga ctcccaggagagaggggtgctgctggcatacctggaggcaagggagaaaagggtgaacct ggtctcagaggtgaaattggtaaccctggcagagatggtgctcgtggtgctcctggtgct gtaggtgcccctggtcctgctggagccacaggtgaccggggcgaagctggggctgctggt cctgctggtcctgctggtcctcggggaagccctggtgaacgtggtgaggtcggtcctgct ggccccaatggatttgctggtcctgctggtgctgctggtcaacctggtgctaaaggagaa agaggagccaaagggcctaagggtgaaaacggtgttgttggtcccacaggccccgttgga gctgctggcccagctggtccaaatggtccccccggtcctgctggaagtcgtggtgatgga ggcccccctggtatgactggtttccctggtgctgctggacggactggtcccccaggaccc tctggtatttctggccctcctggtccccctggtcctgctgggaaagaagggcttcgtggt cctcgtggtgaccaaggtccagttggccgaactggagaagtaggtgcagttggtccccct ggcttcgctggtgagaagggtccctctggagaggctggtactgctggacctcctggcact ccaggtcctcagggtcttcttggtgctcctggtattctgggtctccctggctcgagaggt gaacgtggtctaccaggtgttgctggtgctgtgggtgaacctggtcctcttggcattgcc ggccctcctggggcccgtggtcctcctggtgctgtgggtagtcctggagtcaacggtgct cctggtgaagctggtcgtgatggcaaccctgggaacgatggtcccccaggtcgcgatggt caacccggacacaagggagagcgcggttaccctggcaatattggtcccgttggtgctgca ggtgcacctggtcctcatggccccgtgggtcctgctggcaaacatggaaaccgtggtgaa actggtccttctggtcctgttggtcctgctggtgctgttggcccaagaggtcctagtggc ccacaaggcattcgtggcgataagggagagcccggtgaaaaggggcccagaggtcttcct ggcttaaagggacacaatggattgcaaggtctgcctggtatcgctggtcaccatggtgat caaggtgctcctggctccgtgggtcctgctggtcctaggggccctgctggtccttctggc cctgctggaaaagatggtcgcactggacatcctggtacagttggacctgctggcattcga ggccctcagggtcaccaaggccctgctggcccccctggtccccctggccctcctggacct ccaggtgtaagcggtggtggttatgactttggttacgatggagacttctacagggctgac cagcctcgctcagcaccttctctcagacccaaggactatgaagttgatgctactctgaag tctctcaacaaccagattgagacccttcttactcctgaaggctctagaaagaacccagct cgcacatgccgtgacttgagactcagccacccagagtggagcagtggttactactggatt gaccctaaccaaggatgcactatggatgctatcaaagtatactgtgatttctctactggc gaaacctgtatccgggcccaacctgaaaacatcccagccaagaactggtataggagctcc aaggacaagaaacacgtctggctaggagaaactatcaatgctggcagccagtttgaatat aatgtagaaggagtgacttccaaggaaatggctacccaacttgccttcatgcgcctgctg gccaactatgcctctcagaacatcacctaccactgcaagaacagcattgcatacatggat gaggagactggcaacctgaaaaaggctgtcattctacagggctctaatgatgttgaactt gttgctgagggcaacagcaggttcacttacactgttcttgtagatggctgctctaaaaag acaaatgaatggggaaagacaatcattgaatacaaaacaaataagccatcacgcctgccc ttccttgatattgcacctttggacatcggtggtgctgaccaggaattctttgtggacatt ggcccagtctgtttcaaataa

Homo sapiens (human): 1281 Help Entry 1281              CDS       T01001                                  Symbol COL3A1, EDS4A, EDSVASC, PMGEDSV Name (RefSeq) collagen type III alpha 1 chain   KO K19720   collagen type III alpha Organism hsa  Homo sapiens (human) Pathway hsa04611   Platelet activation hsa04820   Cytoskeleton in muscle cells hsa04926   Relaxin signaling pathway hsa04933   AGE-RAGE signaling pathway in diabetic complications hsa04974   Protein digestion and absorption hsa05146   Amoebiasis hsa05415   Diabetic cardiomyopathy Network nt06539  Cytoskeleton in muscle cells   Element N01814   Extracellular matrix - Basal lamina Disease H00271   Polymicrogyria H02242   Ehlers-Danlos syndrome vascular type Brite KEGG Orthology (KO) [BR:hsa00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     1281 (COL3A1)  09150 Organismal Systems   09151 Immune system    04611 Platelet activation     1281 (COL3A1)   09152 Endocrine system    04926 Relaxin signaling pathway     1281 (COL3A1)   09154 Digestive system    04974 Protein digestion and absorption     1281 (COL3A1)  09160 Human Diseases   09174 Infectious disease: parasitic    05146 Amoebiasis     1281 (COL3A1)   09166 Cardiovascular disease    05415 Diabetic cardiomyopathy     1281 (COL3A1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     1281 (COL3A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:hsa00536]     1281 (COL3A1) Glycosaminoglycan binding proteins [BR:hsa00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    1281 (COL3A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  1281 NCBI-ProteinID:  NP_000081 OMIM:  120180 HGNC:  2201 Ensembl:  ENSG00000168542 UniProt:  P02461 A0AAG2UVC5 Structure PDB LinkDB All DBs Position 2:188974373..189012746 Genome browser AA seq 1466 aa AA seqDB search MMSFVQKGSWLLLALLHPTIILAQQEAVEGGCSHLGQSYADRDVWKPEPCQICVCDSGSV LCDDIICDDQELDCPNPEIPFGECCAVCPQPPTAPTRPPNGQGPQGPKGDPGPPGIPGRN GDPGIPGQPGSPGSPGPPGICESCPTGPQNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPG PPGPPGTSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPGRPG ERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMG PRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPG SNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPAG ANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPG AAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPG SPGGPGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPG GPGPQGPPGKNGETGPQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKPGEPG PKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGGKGAAGPPGPPGAAG TPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGKDGPRGPTGPIGPPGPAGQPGDKG EGGAPGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPG VAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGPSGSPG KDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAG PPGMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEPGRDGNPGSDG LPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGPAGPAGAPGPAG SRGAPGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGAIGSPGPAGPRG PVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCGGV GAAAIAGIGGEKAGGFAPYYGDEPMDFKINTDEIMTSLKSVNGQIESLISPDGSRKNPAR NCRDLKFCHPELKSGEYWVDPNQGCKLDAIKVFCNMETGETCISANPLNVPRKHWWTDSS AEKKHVWFGESMDGGFQFSYGNPELPEDVLDVHLAFLRLLSSRASQNITYHCKNSIAYMD QASGNVKKALKLMGSNEGEFKAEGNSKFTYTVLEDGCTKHTGEWSKTVFEYRTRKAVRLP IVDIAPYDIGGPDQEFGVDVGPVCFL NT seq 4401 nt NT seq  +upstreamnt  +downstreamnt atgatgagctttgtgcaaaaggggagctggctacttctcgctctgcttcatcccactatt attttggcacaacaggaagctgttgaaggaggatgttcccatcttggtcagtcctatgcg gatagagatgtctggaagccagaaccatgccaaatatgtgtctgtgactcaggatccgtt ctctgcgatgacataatatgtgacgatcaagaattagactgccccaacccagaaattcca tttggagaatgttgtgcagtttgcccacagcctccaactgctcctactcgccctcctaat ggtcaaggacctcaaggccccaagggagatccaggccctcctggtattcctgggagaaat ggtgaccctggtattccaggacaaccagggtcccctggttctcctggcccccctggaatc tgtgaatcatgccctactggtcctcagaactattctccccagtatgattcatatgatgtc aagtctggagtagcagtaggaggactcgcaggctatcctggaccagctggccccccaggc cctcccggtccccctggtacatctggtcatcctggttcccctggatctccaggataccaa ggaccccctggtgaacctgggcaagctggtccttcaggccctccaggacctcctggtgct ataggtccatctggtcctgctggaaaagatggagaatcaggtagacccggacgacctgga gagcgaggattgcctggacctccaggtatcaaaggtccagctgggatacctggattccct ggtatgaaaggacacagaggcttcgatggacgaaatggagaaaagggtgaaacaggtgct cctggattaaagggtgaaaatggtcttccaggcgaaaatggagctcctggacccatgggt ccaagaggggctcctggtgagcgaggacggccaggacttcctggggctgcaggtgctcgg ggtaatgacggtgctcgaggcagtgatggtcaaccaggccctcctggtcctcctggaact gccggattccctggatcccctggtgctaagggtgaagttggacctgcagggtctcctggt tcaaatggtgcccctggacaaagaggagaacctggacctcagggacacgctggtgctcaa ggtcctcctggccctcctgggattaatggtagtcctggtggtaaaggcgaaatgggtccc gctggcattcctggagctcctggactgatgggagcccggggtcctccaggaccagccggt gctaatggtgctcctggactgcgaggtggtgcaggtgagcctggtaagaatggtgccaaa ggagagcccggaccacgtggtgaacgcggtgaggctggtattccaggtgttccaggagct aaaggcgaagatggcaaggatggatcacctggagaacctggtgcaaatgggcttccagga gctgcaggagaaaggggtgcccctgggttccgaggacctgctggaccaaatggcatccca ggagaaaagggtcctgctggagagcgtggtgctccaggccctgcagggcccagaggagct gctggagaacctggcagagatggcgtccctggaggtccaggaatgaggggcatgcccgga agtccaggaggaccaggaagtgatgggaaaccagggcctcccggaagtcaaggagaaagt ggtcgaccaggtcctcctgggccatctggtccccgaggtcagcctggtgtcatgggcttc cccggtcctaaaggaaatgatggtgctcctggtaagaatggagaacgaggtggccctgga ggacctggccctcagggtcctcctggaaagaatggtgaaactggacctcagggaccccca gggcctactgggcctggtggtgacaaaggagacacaggaccccctggtccacaaggatta caaggcttgcctggtacaggtggtcctccaggagaaaatggaaaacctggggaaccaggt ccaaagggtgatgccggtgcacctggagctccaggaggcaagggtgatgctggtgcccct ggtgaacgtggacctcctggattggcaggggccccaggacttagaggtggagctggtccc cctggtcccgaaggaggaaagggtgctgctggtcctcctgggccacctggtgctgctggt actcctggtctgcaaggaatgcctggagaaagaggaggtcttggaagtcctggtccaaag ggtgacaagggtgaaccaggcggtccaggtgctgatggtgtcccagggaaagatggccca aggggtcctactggtcctattggtcctcctggcccagctggccagcctggagataagggt gaaggtggtgcccccggacttccaggtatagctggacctcgtggtagccctggtgagaga ggtgaaactggccctccaggacctgctggtttccctggtgctcctggacagaatggtgaa cctggtggtaaaggagaaagaggggctccgggtgagaaaggtgaaggaggccctcctgga gttgcaggaccccctggaggttctggacctgctggtcctcctggtccccaaggtgtcaaa ggtgaacgtggcagtcctggtggacctggtgctgctggcttccctggtgctcgtggtctt cctggtcctcctggtagtaatggtaacccaggacccccaggtcccagcggttctccaggc aaggatgggcccccaggtcctgcgggtaacactggtgctcctggcagccctggagtgtct ggaccaaaaggtgatgctggccaaccaggagagaagggatcgcctggtgcccagggccca ccaggagctccaggcccacttgggattgctgggatcactggagcacggggtcttgcagga ccaccaggcatgccaggtcctaggggaagccctggccctcagggtgtcaagggtgaaagt gggaaaccaggagctaacggtctcagtggagaacgtggtccccctggaccccagggtctt cctggtctggctggtacagctggtgaacctggaagagatggaaaccctggatcagatggt cttccaggccgagatggatctcctggtggcaagggtgatcgtggtgaaaatggctctcct ggtgcccctggcgctcctggtcatccaggcccacctggtcctgtcggtccagctggaaag agtggtgacagaggagaaagtggccctgctggccctgctggtgctcccggtcctgctggt tcccgaggtgctcctggtcctcaaggcccacgtggtgacaaaggtgaaacaggtgaacgt ggagctgctggcatcaaaggacatcgaggattccctggtaatccaggtgccccaggttct ccaggccctgctggtcagcagggtgcaatcggcagtccaggacctgcaggccccagagga cctgttggacccagtggacctcctggcaaagatggaaccagtggacatccaggtcccatt ggaccaccagggcctcgaggtaacagaggtgaaagaggatctgagggctccccaggccac ccagggcaaccaggccctcctggacctcctggtgcccctggtccttgctgtggtggtgtt ggagccgctgccattgctgggattggaggtgaaaaagctggcggttttgccccgtattat ggagatgaaccaatggatttcaaaatcaacaccgatgagattatgacttcactcaagtct gttaatggacaaatagaaagcctcattagtcctgatggttctcgtaaaaaccccgctaga aactgcagagacctgaaattctgccatcctgaactcaagagtggagaatactgggttgac cctaaccaaggatgcaaattggatgctatcaaggtattctgtaatatggaaactggggaa acatgcataagtgccaatcctttgaatgttccacggaaacactggtggacagattctagt gctgagaagaaacacgtttggtttggagagtccatggatggtggttttcagtttagctac ggcaatcctgaacttcctgaagatgtccttgatgtgcatctggcattccttcgacttctc tccagccgagcttcccagaacatcacatatcactgcaaaaatagcattgcatacatggat caggccagtggaaatgtaaagaaggccctgaagctgatggggtcaaatgaaggtgaattc aaggctgaaggaaatagcaaattcacctacacagttctggaggatggttgcacgaaacac actggggaatggagcaaaacagtctttgaatatcgaacacgcaaggctgtgagactacct attgtagatattgcaccctatgacattggtggtcctgatcaagaatttggtgtggacgtt ggccctgtttgctttttataa

Homo sapiens (human): 1289 Help Entry 1289              CDS       T01001                                  Symbol COL5A1, EDSC, EDSCL1, FMDMF Name (RefSeq) collagen type V alpha 1 chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism hsa  Homo sapiens (human) Pathway hsa04820   Cytoskeleton in muscle cells hsa04974   Protein digestion and absorption Network nt06539  Cytoskeleton in muscle cells   Element N01814   Extracellular matrix - Basal lamina Disease H00802   Ehlers-Danlos syndrome H02719   Multifocal fibromuscular dysplasia Brite KEGG Orthology (KO) [BR:hsa00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     1289 (COL5A1)  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     1289 (COL5A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:hsa00536]     1289 (COL5A1) Glycosaminoglycan binding proteins [BR:hsa00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    1289 (COL5A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_1 Motif Other DBs NCBI-GeneID:  1289 NCBI-ProteinID:  NP_000084 OMIM:  120215 HGNC:  2209 Ensembl:  ENSG00000130635 UniProt:  P20908 B2ZZ86 Q59EE7 Structure PDB LinkDB All DBs Position 9:134641803..134844843 Genome browser AA seq 1838 aa AA seqDB search MDVHTRWKARSALRPGAPLLPPLLLLLLWAPPPSRAAQPADLLKVLDFHNLPDGITKTTG FCATRRSSKGPDVAYRVTKDAQLSAPTKQLYPASAFPEDFSILTTVKAKKGSQAFLVSIY NEQGIQQIGLELGRSPVFLYEDHTGKPGPEDYPLFRGINLSDGKWHRIALSVHKKNVTLI LDCKKKTTKFLDRSDHPMIDINGIIVFGTRILDEEVFEGDIQQLLFVSDHRAAYDYCEHY SPDCDTAVPDTPQSQDPNPDEYYTEGDGEGETYYYEYPYYEDPEDLGKEPTPSKKPVEAA KETTEVPEELTPTPTEAAPMPETSEGAGKEEDVGIGDYDYVPSEDYYTPSPYDDLTYGEG EENPDQPTDPGAGAEIPTSTADTSNSSNPAPPPGEGADDLEGEFTEETIRNLDENYYDPY YDPTSSPSEIGPGMPANQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLP GPPGTMGPTGQVGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVS AQESQAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPP GPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDD GERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPP GQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPP GPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGED GPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGR GTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFP GPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPP GPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPP GPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPV GLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEP GPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPS GAPGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAA GPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPT GEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLR GIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEK GDRGLPGPQGSSGPKGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHP GPPGPPGPPGEVIQPLPIQASRTRRNIDASQLLDDGNGENYVDYADGMEEIFGSLNSLKL EIEQMKRPLGTQQNPARTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGGSTC VFPDKKSEGARITSWPKENPGSWFSEFKRGKLLSYVDAEGNPVGVVQMTFLRLLSASAHQ NVTYHCYQSVAWQDAATGSYDKALRFLGSNDEEMSYDNNPYIRALVDGCATKKGYQKTVL EIDTPKVEQVPIVDIMFNDFGEASQKFGFEVGPACFMG NT seq 5517 nt NT seq  +upstreamnt  +downstreamnt atggacgtccatacccgctggaaagcgcgcagcgcgctccgcccgggcgccccgctgctg cccccgctgctgctgctgctgctgtgggcgccgcctccgagccgcgcagctcagccagca gatctcctgaaggttctagattttcacaacttgcctgatggaataacaaagacaacaggc ttttgcgccacgcggcgatcttccaaaggcccggatgtcgcttacagagtcaccaaagac gcgcagctcagcgcacccaccaagcagctgtaccctgcgtctgcatttcccgaggacttc tccatcctaacaactgtgaaagccaagaaaggcagccaggccttcctggtctccatctac aacgagcagggtatccagcagattgggctggagctgggccgctctcccgtcttcctctac gaggaccacacggggaagcctggcccggaagactaccccctcttccggggcatcaacctg tcagatggcaagtggcacagaattgctctcagcgtccacaagaaaaatgtcaccttgatc ctcgactgtaaaaagaagaccaccaaattcctcgaccgcagcgaccaccccatgatcgac atcaatggcatcatcgtgtttggcacccggatcctggatgaggaggtgtttgagggtgac atccagcagctgctctttgtctcggaccaccgggcagcttatgattactgtgagcactac agccctgactgtgacaccgcagtacctgacaccccacagtcgcaggaccccaatccagat gaatattacacggaaggagacggcgagggtgagacctattactacgaatacccctactac gaagaccccgaagacctagggaaggagcccacccccagcaagaagcccgtggaagctgcc aaagaaaccacagaggtccccgaggagctgaccccgacccccacggaagctgctcccatg cctgaaaccagtgaaggggctgggaaggaagaggacgtcggcatcggggactatgactac gtgcccagtgaggactactacacgccctcaccgtatgatgacctcacctatggcgagggg gaggagaaccccgaccagcccacagacccaggcgctggggccgaaattcccaccagcacc gccgacacctccaactcctccaatccagctccgcctccaggggaaggtgcggatgacttg gagggggagttcactgaggaaacgatccggaaccttgacgagaactactacgacccctac tacgaccccaccagctccccgtcggagatcgggccgggaatgccggcgaaccaggatacc atctatgaagggattggaggacctcggggcgagaaaggccaaaagggagaaccagcgatt atcgagccgggcatgctcatcgagggcccgcctggcccagaaggccccgcgggtcttccc ggacctccaggaaccatgggtcccactggccaagtcggggaccctggagaaaggggcccc cctggacgcccaggccttcctggggccgatggcctgcccggtcctccaggaaccatgctc atgctgcccttccggtttggaggtggcggcgatgcgggctccaaaggccccatggtctca gcccaggagtcccaggcgcaagccattctccagcaggccaggttggcactgaggggacca gctggcccgatgggtctcacagggagacctggccctgtgggtccccctgggagcggaggt ttgaagggcgagccgggagacgtggggcctcagggtcctcgaggtgtgcaaggcccgcct ggtccggccgggaagcccggaagacggggtcgggctgggagtgatggagccagaggaatg cctggacaaactggccccaagggtgaccggggtttcgacggcctggctgggttgccaggc gagaagggccacaggggtgaccctggtccttccggcccaccaggacctccgggagacgat ggagaaaggggtgacgacggagaagttgggcccagggggctgcctggggagcccgggcca cgtggtctgcttgggccgaaggggcccccaggtcctcccggacctcccggtgtcacgggt atggacggccagccggggccaaaaggaaatgtgggtccccagggagagcctggcccccca ggacagcagggtaatccaggcgcccagggtcttccaggcccccagggtgcaattggtcct ccaggagaaaagggtcccttggggaaaccaggccttccaggaatgcccggtgctgacgga cccccgggacaccctggcaaagaaggccctccaggagagaaaggaggtcagggtccacct ggcccccagggtccgattggctacccaggtcctcgaggagtcaagggggccgatggcatc cgtggtctgaagggcacaaagggcgagaagggtgaagacggctttcctgggtttaaagga gacatgggcatcaagggtgatcggggggagatcggcccacccggtcccaggggagaagat ggccctgaaggcccaaagggtcgcggaggtcccaatggtgaccccggtcctctgggaccc cctggggagaagggaaaactcggagtcccagggttaccagggtatccaggaagacaagga ccaaagggctctattggattccctggatttcctggcgccaatggagagaagggcggcagg gggacccctggaaagccaggaccgcgggggcagcgaggcccaacgggtccgaggggtgaa agaggcccccggggcatcactgggaagcctggccccaagggcaactccggaggtgacggc ccagctggccctcctggtgaacggggacccaatggaccccaaggacccacaggatttcct ggaccaaagggcccccctggccctccaggcaaggatggactcccaggacaccctggacag agaggcgagactggtttccaaggcaagaccggccctccaggcccccccggcgtggtcggc cctcagggtcccacgggagaaacgggcccaatgggtgagcgtggccaccctgggccccct ggaccccccggtgaacaggggcttccgggccttgctggaaaagaagggacgaagggtgac ccaggccctgcaggcctccctgggaaagatggccctccaggattacgtggtttccctggg gaccgagggcttcctggtccagtgggagctcttggactgaaaggcaatgaagggccccct ggcccaccaggccctgcgggatctccaggggagagaggtccagctggagccgctgggccc atcggaattccagggagacctgggccccagggacccccagggccggcaggagagaaaggg gctcctggcgagaaaggcccacaaggcccagctggccgagacggtctccaggggcctgtg gggctcccgggtccagctggccctgtgggtccccctggagaagacggagataagggagag atcggggagccggggcagaaaggaagcaagggggacaaaggagaacagggtcctcctggg cctacaggtcctcaaggccccatcggacagccaggcccctctggagctgacggcgagccg gggcctcggggccagcagggccttttcgggcagaaaggtgatgaaggtcccagaggcttt cctggaccccctgggccagtggggctgcagggtttgccaggacctccaggcgagaagggt gagacaggagacgtgggccagatgggccccccgggtccccctggcccccgaggaccctcc ggagctccaggtgctgatggcccacaaggtcccccaggtggaataggaaaccctggtgca gtgggagagaagggcgagcctggcgaagcaggtgagcctggccttccgggagaaggcggc cccccgggacccaaaggagaaaggggagagaagggcgagtcaggcccttcaggtgctgcc ggaccccctggacccaaaggccctcccggagatgatggtcccaaaggcagccctggccca gtgggttttcctggagatcctggcccccccggagagcctggccccgcgggtcaagatggt ccccctggtgacaaaggagatgatggtgaacccgggcagacgggatcccccggccctact ggtgaaccaggtccatcggggcctccaggaaaaaggggtcccccaggccccgcaggcccc gaaggcagacagggagagaaaggggccaagggagaagccggcttggaaggccctcctggg aagactggccccatcggcccccagggggcccctgggaagcccggaccggatggccttcga gggatccctggccctgtgggagaacaaggtctcccaggatccccaggcccggacggtccc cccggccccatgggtcccccaggacttcccggcctcaaaggagattctggtcccaaaggt gaaaagggtcatccaggcctgatcgggctcatcggtcctccgggtgaacagggtgagaag ggcgaccgtggtctccctggcccccagggctcctccggtcctaagggagaacagggtatc actggtccttctggcccgattgggcctcctgggccccctggcctgccgggtccgcctggt ccaaaaggtgctaagggctcctcgggtccaactggcccgaagggtgaggcaggccaccca ggacccccaggccccccgggccccccgggagaggtcatccagcccctgccaatccaggca tccaggacgcggcggaacatcgacgccagccagctgctggacgacgggaatggcgagaac tacgtggactacgcggacggcatggaagagatcttcggctctctcaactctctgaagctg gagattgagcagatgaaacggcccctgggcacgcagcagaaccccgcccgcacctgcaag gacctgcagctctgccaccccgacttcccagatggtgaatactgggtcgatcctaaccaa ggatgctccagggattccttcaaggtttactgcaacttcacagccggggggtcgacatgc gtcttccctgacaagaagtccgaaggggccagaatcacttcttggcccaaagaaaacccg ggctcctggttcagtgaattcaagcgtgggaaactgctctcctatgtggacgccgagggc aaccctgtgggtgtggtacagatgaccttcctgcggctgctgagcgcctctgcccaccag aacgtcacctaccactgctaccagtcagtggcctggcaggacgcagccacgggcagctac gacaaggccctccgcttcctgggctccaacgacgaggagatgtcctatgacaacaacccc tacatccgcgccctggtggacggctgtgctaccaagaaaggctaccagaagacggttctg gagatcgacacccccaaagtggagcaggtgcccatcgtggacatcatgttcaatgacttc ggtgaagcgtcacagaaatttggatttgaagtggggccggcttgcttcatgggctag

Homo sapiens (human): 1290 Help Entry 1290              CDS       T01001                                  Symbol COL5A2, EDSC, EDSCL2 Name (RefSeq) collagen type V alpha 2 chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism hsa  Homo sapiens (human) Pathway hsa04820   Cytoskeleton in muscle cells hsa04974   Protein digestion and absorption Network nt06539  Cytoskeleton in muscle cells   Element N01814   Extracellular matrix - Basal lamina Disease H00802   Ehlers-Danlos syndrome Brite KEGG Orthology (KO) [BR:hsa00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     1290 (COL5A2)  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     1290 (COL5A2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:hsa00536]     1290 (COL5A2) Glycosaminoglycan binding proteins [BR:hsa00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    1290 (COL5A2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC TILa Amnionless Motif Other DBs NCBI-GeneID:  1290 NCBI-ProteinID:  NP_000384 OMIM:  120190 HGNC:  2210 Ensembl:  ENSG00000204262 UniProt:  P05997 LinkDB All DBs Position 2:complement(189031898..189441111) Genome browser AA seq 1499 aa AA seqDB search MMANWAEARPLLILIVLLGQFVSIKAQEEDEDEGYGEEIACTQNGQMYLNRDIWKPAPCQ ICVCDNGAILCDKIECQDVLDCADPVTPPGECCPVCSQTPGGGNTNFGRGRKGQKGEPGL VPVVTGIRGRPGPAGPPGSQGPRGERGPKGRPGPRGPQGIDGEPGVPGQPGAPGPPGHPS HPGPDGLSRPFSAQMAGLDEKSGLGSQVGLMPGSVGPVGPRGPQGLQGQQGGAGPTGPPG EPGDPGPMGPIGSRGPEGPPGKPGEDGEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKG HRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHG MPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPG AIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAG PKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPKG AQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPG PPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPG LAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERG EPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRG GIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENG PTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRG TQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAG PPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVG PTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPG SQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRG QKGHRGFTGLQGLPGPPGPNGEQGSAGIPGPFGPRGPPGPVGPSGKEGNPGPLGPIGPPG VRGSVGEAGPEGPPGEPGPPGPPGPPGHLTAALGDIMGHYDESMPDPLPEFTEDQAAPDD KNKTDPGVHATLKSLSSQIETMRSPDGSKKHPARTCDDLKLCHSAKQSGEYWIDPNQGSV EDAIKVYCNMETGETCISANPSSVPRKTWWASKSPDNKPVWYGLDMNRGSQFAYGDHQSP NTAITQMTFLRLLSKEASQNITYICKNSVGYMDDQAKNLKKAVVLKGANDLDIKAEGNIR FRYIVLQDTCSKRNGNVGKTVFEYRTQNVARLPIIDLAPVDVGGTDQEFGVEIGPVCFV NT seq 4500 nt NT seq  +upstreamnt  +downstreamnt atgatggcaaactgggcggaagcaagacctctcctcattcttattgttttattagggcaa tttgtctcaataaaagcccaggaagaagacgaggatgaaggatatggtgaagaaatagcc tgcactcagaatggccagatgtacttaaacagggacatttggaaacctgccccttgtcag atctgtgtctgtgacaatggagccattctctgtgacaagatagaatgccaggatgtgctg gactgtgccgaccctgtaacgccccctggggaatgctgtcctgtctgttcacaaacacct ggaggtggcaataccaattttggtagaggaagaaagggacaaaagggagaaccaggatta gtgcctgttgtaacaggcatacgtggtcgtccaggaccggcaggacctccaggatcacag ggaccaagaggagagcgagggccaaaaggaagacctggccctcgtggacctcagggaatt gatggagaaccaggtgttcctggtcaacctggtgctccaggacctcctggacatccgtcc cacccaggacccgatggcttgagcaggccgttttcagctcaaatggctgggttggatgaa aaatctggacttgggagtcaagtaggactaatgcctggctctgtgggtcctgttggccca aggggaccacagggtttacaaggacagcaaggtggtgcaggacctacaggacctcctggt gaacctggtgatcctggaccaatgggtccgattggttcacgtggaccagagggccctcct ggtaaacctggggaagatggtgaacctggcagaaatggaaatcctggtgaagtgggattt gcaggatctccgggagctcgtggatttcctggggctcctggtcttccaggtctgaagggt caccgaggacacaaaggtcttgaaggccctaaaggtgaagttggagcacctggttccaag ggtgaagctggccccactggtccaatgggtgccatgggtcctctgggtccgaggggaatg ccaggagagagagggagacttgggccacagggtgctcctggacaacgaggtgcacatggt atgcctggaaaacctggaccaatgggtcctcttgggataccaggctcttctggttttcca ggaaatcctggaatgaagggagaagcaggtcctacaggggcgcgaggccctgaaggtcct caggggcagagaggtgaaactgggcccccaggtccagttggctctccaggtcttcctggt gcaataggaactgatggtactcctggtgccaaaggcccaacgggctctccaggtacctct ggtcctcctggctcagcagggcctcctggatctccaggacctcagggtagcactggtcct cagggaattcgaggccaaccgggtgatccaggagttccaggtttcaaaggagaagctggc ccaaaaggggaaccagggccacatggtattcagggtccgataggcccacccggtgaagaa ggcaaaagaggtcccagaggtgacccaggaacagttggtcctccagggccagtgggagaa aggggtgctcctggcaatcgtggttttccaggctctgatggtttacctgggccaaagggt gctcaaggagaacggggtcctgtaggttcttcaggacccaaaggaagccagggggatcca ggacgtccaggggaacctgggcttccaggtgctcggggtttgacaggaaatcctggtgtt caaggtcctgaaggaaaacttggacctttgggtgcgccaggggaagatggccgtccaggt cctccaggctccataggaatcagagggcagcccgggagcatgggccttccaggccccaaa ggtagcagtggtgaccctgggaaacctggagaagcaggaaatgctggagttcctgggcag aggggagctcctggaaaagatggtgaagttggtccttctggtcctgtgggcccgccgggt ctagctggtgaaagaggagaacaaggacctccaggccccacaggttttcaggggcttcct ggtcctccagggcctcctggagaaggtggaaaaccaggtgatcaaggtgttcctggagat cccggagcagttggcccgttaggacctagaggagaacgaggaaatcctggggaaagagga gaacctgggataactggactccctggtgagaagggaatggctggaggacatggtcctgat ggcccaaaaggcagtccaggtccatctgggacccctggagatacaggcccaccaggtctt caaggtatgccgggagaaagaggaattgcaggaactcctggccccaagggtgacagaggt ggcataggagaaaaaggtgctgaaggcacagctggaaatgatggtgcaagaggtcttcca ggtcctttgggccctccaggtccggcaggtcctactggagaaaagggtgaacctggtcct cgaggtttagttggccctcctggctcccggggcaatcctggttctcgaggtgaaaatggg ccaactggagctgttggttttgccggaccccagggtcctgacggacagcctggagtaaaa ggtgaacctggagagccaggacagaagggagatgctggttctcctggaccacaaggttta gcaggatcccctggccctcatggtcctaatggtgttcctggactaaaaggtggtcgagga acccaaggtccgcctggtgctacaggatttcctggttctgcgggcagagttggacctcca ggccctgctggagctccaggacctgcgggacccctaggggaacccgggaaggagggacct ccaggtcttcgtggggaccctggctctcatgggcgtgtgggagatcgaggaccagctggc ccccctggtggcccaggagacaaaggggacccaggagaagatgggcaacctggtccagat ggcccccctggtccagctggaacgaccgggcagagaggaattgttggcatgcctgggcaa cgtggagagagaggcatgcccggcctaccaggcccagcgggaacaccaggaaaagtagga ccaactggtgcaacaggagataaaggtccacctggacctgtggggcccccaggctccaat ggtcctgtaggggaacctggaccagaaggtccagctggcaatgatggtaccccaggacgg gatggtgctgttggagaacgtggtgatcgtggagaccctgggcctgcaggtctgccaggc tctcagggtgcccctggaactcctggccctgtgggtgctccaggagatgcaggacaaaga ggagatccgggttctcggggtcctataggaccacctggtcgagctgggaaacgtggatta cctggaccccaaggacctcgtggtgacaaaggtgatcatggagaccgaggtgacagaggt cagaagggccacagaggctttactggtcttcagggtcttcctggccctcctggtccaaat ggtgaacaaggaagtgctggaatccctggaccatttggcccaagaggtcctccaggccca gttggtccttcaggtaaagaaggaaaccctgggccacttgggccaattggacctccaggt gtacgaggcagtgtaggagaagcaggacctgagggccctcctggtgagcctggcccacct ggccctccgggtccccctggccaccttacagctgctcttggggatatcatggggcactat gatgaaagcatgccagatccacttcctgagtttactgaagatcaggcggctcctgatgac aaaaacaaaacggacccaggggttcatgctaccctgaagtcactcagtagtcagattgaa accatgcgcagccccgatggctcgaaaaagcacccagcccgcacgtgtgatgacctaaag ctttgccattccgcaaagcagagtggtgaatactggattgatcctaaccaaggatctgtt gaagatgcaatcaaagtttactgcaacatggaaacaggagaaacatgtatttcagcaaac ccatccagtgtaccacgtaaaacctggtgggccagtaaatctcctgacaataaacctgtt tggtatggtcttgatatgaacagagggtctcagttcgcttatggagaccaccaatcacct aatacagccattactcagatgacttttttgcgccttttatcaaaagaagcctcccagaac atcacttacatctgtaaaaacagtgtaggatacatggacgatcaagctaagaacctcaaa aaagctgtggttctcaaaggggcaaatgacttagatatcaaagcagagggaaatattaga ttccggtatatcgttcttcaagacacttgctctaagcggaatggaaatgtgggcaagact gtctttgaatatagaacacagaatgtggcacgcttgcccatcatagatcttgctcctgtg gatgttggcggcacagaccaggaattcggcgttgaaattgggccagtttgttttgtgtaa

Homo sapiens (human): 50509 Help Entry 50509             CDS       T01001                                  Symbol COL5A3 Name (RefSeq) collagen type V alpha 3 chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism hsa  Homo sapiens (human) Pathway hsa04820   Cytoskeleton in muscle cells hsa04974   Protein digestion and absorption Network nt06539  Cytoskeleton in muscle cells   Element N01814   Extracellular matrix - Basal lamina Brite KEGG Orthology (KO) [BR:hsa00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     50509 (COL5A3)  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     50509 (COL5A3)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:hsa00536]     50509 (COL5A3) Glycosaminoglycan binding proteins [BR:hsa00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    50509 (COL5A3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_3 Motif Other DBs NCBI-GeneID:  50509 NCBI-ProteinID:  NP_056534 OMIM:  120216 HGNC:  14864 Ensembl:  ENSG00000080573 UniProt:  P25940 LinkDB All DBs Position 19:complement(9959561..10010504) Genome browser AA seq 1745 aa AA seqDB search MGNRRDLGQPRAGLCLLLAALQLLPGTQADPVDVLKALGVQGGQAGVPEGPGFCPQRTPE GDRAFRIGQASTLGIPTWELFPEGHFPENFSLLITLRGQPANQSVLLSIYDERGARQLGL ALGPALGLLGDPFRPLPQQVNLTDGRWHRVAVSIDGEMVTLVADCEAQPPVLGHGPRFIS IAGLTVLGTQDLGEKTFEGDIQELLISPDPQAAFQACERYLPDCDNLAPAATVAPQGEPE TPRPRRKGKGKGRKKGRGRKGKGRKKNKEIWTSSPPPDSAENQTSTDIPKTETPAPNLPP TPTPLVVTSTVTTGLNATILERSLDPDSGTELGTLETKAAREDEEGDDSTMGPDFRAAEY PSRTQFQIFPGAGEKGAKGEPAVIEKGQQFEGPPGAPGPQGVVGPSGPPGPPGFPGDPGP PGPAGLPGIPGIDGIRGPPGTVIMMPFQFAGGSFKGPPVSFQQAQAQAVLQQTQLSMKGP PGPVGLTGRPGPVGLPGHPGLKGEEGAEGPQGPRGLQGPHGPPGRVGKMGRPGADGARGL PGDTGPKGDRGFDGLPGLPGEKGQRGDFGHVGQPGPPGEDGERGAEGPPGPTGQAGEPGP RGLLGPRGSPGPTGRPGVTGIDGAPGAKGNVGPPGEPGPPGQQGNHGSQGLPGPQGLIGT PGEKGPPGNPGIPGLPGSDGPLGHPGHEGPTGEKGAQGPPGSAGPPGYPGPRGVKGTSGN RGLQGEKGEKGEDGFPGFKGDVGLKGDQGKPGAPGPRGEDGPEGPKGQAGQAGEEGPPGS AGEKGKLGVPGLPGYPGRPGPKGSIGFPGPLGPIGEKGKSGKTGQPGLEGERGPPGSRGE RGQPGATGQPGPKGDVGQDGAPGIPGEKGLPGLQGPPGFPGPKGPPGHQGKDGRPGHPGQ RGELGFQGQTGPPGPAGVLGPQGKTGEVGPLGERGPPGPPGPPGEQGLPGLEGREGAKGE LGPPGPLGKEGPAGLRGFPGPKGGPGDPGPTGLKGDKGPPGPVGANGSPGERGPLGPAGG IGLPGQSGSEGPVGPAGKKGSRGERGPPGPTGKDGIPGPLGPLGPPGAAGPSGEEGDKGD VGAPGHKGSKGDKGDAGPPGQPGIRGPAGHPGPPGADGAQGRRGPPGLFGQKGDDGVRGF VGVIGPPGLQGLPGPPGEKGEVGDVGSMGPHGAPGPRGPQGPTGSEGTPGLPGGVGQPGA VGEKGERGDAGDPGPPGAPGIPGPKGDIGEKGDSGPSGAAGPPGKKGPPGEDGAKGSVGP TGLPGDLGPPGDPGVSGIDGSPGEKGDPGDVGGPGPPGASGEPGAPGPPGKRGPSGHMGR EGREGEKGAKGEPGPDGPPGRTGPMGARGPPGRVGPEGLRGIPGPVGEPGLLGAPGQMGP PGPLGPSGLPGLKGDTGPKGEKGHIGLIGLIGPPGEAGEKGDQGLPGVQGPPGPKGDPGP PGPIGSLGHPGPPGVAGPLGQKGSKGSPGSMGPRGDTGPAGPPGPPGAPAELHGLRRRRR FVPVPLPVVEGGLEEVLASLTSLSLELEQLRRPPGTAERPGLVCHELHRNHPHLPDGEYW IDPNQGCARDSFRVFCNFTAGGETCLYPDKKFEIVKLASWSKEKPGGWYSTFRRGKKFSY VDADGSPVNVVQLNFLKLLSATARQNFTYSCQNAAAWLDEATGDYSHSARFLGTNGEELS FNQTTAATVSVPQDGCRLRKGQTKTLFEFSSSRAGFLPLWDVAATDFGQTNQKFGFELGP VCFSS NT seq 5238 nt NT seq  +upstreamnt  +downstreamnt atggggaaccgccgggacctgggccagccgcgggccggtctctgcctgctcctggccgcg ctgcagcttctgccggggacgcaggccgatcctgtggatgtcctgaaggccctgggtgtg cagggaggccaggctggggtccccgaggggcctggcttctgtccccagaggactccagag ggtgaccgggcattcagaattggccaggccagcacgctcggcatccccacgtgggaactc tttccagaaggccactttcctgagaacttctccttgctgatcaccttgcggggacagcca gccaatcagtctgtcctgctgtccatttatgatgaaaggggtgcccggcagttgggcctg gcactggggccagcgctgggtctcctaggtgaccccttccgccccctcccccagcaggtc aacctcacagatggcaggtggcaccgtgtggccgtcagcatagatggtgagatggtgacc ctggtagctgactgtgaagctcagccccctgttttgggccatggcccccgcttcatcagc atagctggactcactgtgctggggacccaggaccttggggaaaagactttcgagggagac attcaggagctgctgataagcccagatcctcaggctgccttccaggcttgtgagcggtac ctccccgactgtgacaacctggcaccggcagccacagtggctccccagggtgaaccagaa acccctcgtcctcggcggaaggggaagggaaaagggaggaagaaagggcgaggtcgcaag gggaagggcaggaaaaagaacaaggaaatttggacctcaagtccacctcctgactccgca gagaaccagacctccactgacatccccaagacagagactccagctccaaatctgcctccg acccccacgcctttggtcgtcacctccactgtgactactggactcaatgccacgatccta gagaggagcttggaccctgacagtggaaccgagctggggaccctggagaccaaggcagcc agggaggatgaagaaggagatgattccaccatgggccctgacttccgggcagcagaatat ccatctcggactcagttccagatctttcctggtgctggagagaaaggagcaaaaggagag cccgcagtgattgaaaaggggcagcagtttgagggacctccaggagccccaggaccccaa ggggtggttggcccctcaggccctcccggccccccaggattccctggcgaccctggtcca ccgggccctgctggcctcccaggaatccccggcattgatgggatccgaggcccaccgggc actgtgatcatgatgccgttccagtttgcaggcggctcctttaaaggccccccagtctca ttccagcaggcccaggctcaggcagttctgcagcagactcagctctctatgaaaggcccc cctggtccagtggggctcactgggcgcccaggccctgtgggtctccccgggcatccaggt ctgaaaggagaggagggagcagaagggccacagggtccccgaggcctgcagggacctcat ggaccccctggccgagtgggcaagatgggccgccctggagcagatggagctcggggcctc ccaggggacactggacctaagggtgatcgtggcttcgatggcctccctgggctgcctggt gagaagggccaaaggggtgactttggccatgtggggcaacccggtcccccaggagaggat ggtgagaggggagcagagggacctccagggcccactggccaggctggggagccgggtcca cgaggactgcttggccccagaggctctcctggccccacgggtcgcccgggtgtgactgga attgatggtgctcctggtgccaaaggcaatgtgggtcctccaggagaaccaggccctccg ggacagcagggaaaccatgggtcccagggactccccggtccccagggactcattggcact cctggggagaagggtccccctggaaacccaggaattccaggcctcccaggatccgatggc cctctgggtcacccaggacatgagggccccacgggagagaaaggggctcagggtccacca gggtcggcaggccctccgggctatcctggacctcggggagtgaagggcacttcaggcaac cggggcctccagggggagaaaggcgagaagggagaggacggcttcccaggcttcaagggc gatgtggggctcaaaggtgatcaggggaaacccggagctccaggtccccggggagaggat ggtcctgaggggccgaaggggcaggcggggcaggctggcgaggaggggcccccaggctca gctggggagaagggcaagcttggggtgccaggcctcccaggttatccaggacgccctgga cctaagggatctattggatttcccggtcccctgggacccataggagagaaagggaagtcg ggaaagacagggcagccaggcctggaaggagagcggggaccaccaggttcccgtggagag agggggcaaccgggtgccacagggcaaccaggccccaagggcgatgtgggccaggatgga gcccctgggatccctggagaaaagggcctccctggtctgcaaggccctccaggattccct gggccaaagggcccccctggtcaccaaggtaaagatgggcgaccagggcaccctggacag agaggagaactgggcttccaaggtcagacaggcccgcctggaccagctggtgtcttaggc cctcagggaaagacaggagaagtgggacctctaggtgaaagggggcctccaggcccccct ggacctcctggtgaacaaggtcttcctggcctggaaggcagagagggggccaagggggaa ctgggaccaccaggaccccttgggaaagaagggccagctggactcaggggctttcccggc cccaaagggggccctggggacccgggacctactggcttaaagggtgataagggcccccca gggcccgtgggggccaatggctcccctggtgagcgcggtcctttgggcccagcaggaggc attggacttcctggccaaagtggcagcgaaggccccgttggccctgcaggcaagaagggg tcccggggagaacgtggcccccctggccccactggcaaagatgggatcccagggcccctg gggcctctgggaccccctggagctgctgggccttctggcgaggaaggggacaagggggat gtgggtgcccccggacacaaggggagtaaaggcgataaaggagacgcgggcccacctgga caaccagggatacggggtcctgcaggacacccaggtcccccgggagcagacggggctcag gggcgccggggacccccaggcctctttgggcagaaaggagatgacggagtcagaggcttt gtgggggtgattggccctcctggactgcaggggctgccaggccctccgggagagaaaggg gaggtcggagacgtcgggtccatgggtccccatggagctccaggtcctcggggtccccaa ggccccactggatcagagggcactccagggctgcctggaggagttggtcagccaggcgcc gtgggtgagaagggtgagcgaggggacgctggagacccagggcctccaggagccccaggc atcccggggcccaagggagacattggtgaaaagggggactcaggcccatctggagctgct ggacccccaggcaagaaaggtccccctggagaggatggagccaaagggagcgtgggcccc acggggctgcccggagatctagggcccccaggagaccctggagtttcaggcatagatggt tccccaggggagaagggagaccctggtgatgttgggggaccgggtccgcctggagcttct ggggagcccggcgcccccgggccccccggcaagaggggtccttcaggccacatgggtcga gaaggcagagaaggggagaaaggtgccaagggggagccaggtcctgatgggcccccaggg aggacgggtccaatgggggctagagggccccctggacgtgtggggcctgagggtcttcga gggatccctggccctgtgggtgaaccaggcctcctgggagcccctggacagatgggccct cctggccccctggggccctctggcctcccagggctgaagggagacactggccccaagggg gaaaagggccacattggattgatcggtctcattggccccccgggagaagctggtgagaaa ggagatcaggggttgccaggcgtgcagggaccccctggtcccaagggagaccctggtccc cctggtcccattggctctctgggccaccctgggcccccaggtgtggcgggccctctagga cagaaaggctcaaaagggtctccggggtccatgggcccccgtggagacactggacctgca ggcccaccaggccccccgggtgcccctgccgagctgcatgggctgcgcaggcgccggcgc ttcgtcccagtcccgcttccagtcgtggagggcggcctggaggaggtgctggcctcgctc acatcgctgagcttggagctggagcagctgcggcgtcctcccggcactgcggagcgcccg ggcctcgtgtgccacgagctgcaccgcaaccacccgcacctgcctgatggggaatactgg attgaccccaaccagggctgcgcgcgggactcgttcagggttttttgcaacttcacggcg ggaggagagacctgcctctatcccgacaagaagtttgagatcgtgaaattggcctcctgg tccaaggaaaagcctggaggctggtatagcacattccgtcgagggaagaagttctcctac gtggacgccgacgggtccccagtgaatgtcgtgcagctgaacttcctgaaactgctgagt gccacagctcgccagaacttcacctactcctgccagaatgcagctgcctggctggacgaa gccacgggtgactacagccactccgcccgcttccttggcaccaatggagaggagctgtct ttcaaccagacgacagcagccactgtcagcgtcccccaggatggctgccggctccggaaa ggacagacgaagacccttttcgaattcagctcttctcgagcgggatttctgcccctgtgg gatgtggcggccactgactttggccagacgaaccaaaagtttgggtttgaactgggcccc gtctgcttcagcagctga

Homo sapiens (human): 1297 Help Entry 1297              CDS       T01001                                  Symbol COL9A1, DJ149L1.1.2, EDM6, MED, STL4 Name (RefSeq) collagen type IX alpha 1 chain   KO K08131   collagen type IX alpha Organism hsa  Homo sapiens (human) Pathway hsa04151   PI3K-Akt signaling pathway hsa04510   Focal adhesion hsa04512   ECM-receptor interaction hsa04820   Cytoskeleton in muscle cells hsa04974   Protein digestion and absorption hsa05165   Human papillomavirus infection Network nt06539  Cytoskeleton in muscle cells   Element N01814   Extracellular matrix - Basal lamina Disease H00476   Multiple epiphyseal dysplasia H02072   Stickler syndrome Brite KEGG Orthology (KO) [BR:hsa00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     1297 (COL9A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     1297 (COL9A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     1297 (COL9A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     1297 (COL9A1)  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     1297 (COL9A1)  09160 Human Diseases   09172 Infectious disease: viral    05165 Human papillomavirus infection     1297 (COL9A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:hsa00535]     1297 (COL9A1) Proteoglycans [BR:hsa00535]  Extracellular matrix (ECM) proteoglycans   Others    1297 (COL9A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen Laminin_G_2 Laminin_G_3 Toxin_R_bind_N Motif Other DBs NCBI-GeneID:  1297 NCBI-ProteinID:  NP_001842 OMIM:  120210 HGNC:  2217 Ensembl:  ENSG00000112280 UniProt:  P20849 Structure PDB LinkDB All DBs Position 6:complement(70215061..70303084) Genome browser AA seq 921 aa AA seqDB search MKTCWKIPVFFFVCSFLEPWASAAVKRRPRFPVNSNSNGGNELCPKIRIGQDDLPGFDLI SQFQVDKAASRRAIQRVVGSATLQVAYKLGNNVDFRIPTRNLYPSGLPEEYSFLTTFRMT GSTLKKNWNIWQIQDSSGKEQVGIKINGQTQSVVFSYKGLDGSLQTAAFSNLSSLFDSQW HKIMIGVERSSATLFVDCNRIESLPIKPRGPIDIDGFAVLGKLADNPQVSVPFELQWMLI HCDPLRPRRETCHELPARITPSQTTDERGPPGEQGPPGPPGPPGVPGIDGIDGDRGPKGP PGPPGPAGEPGKPGAPGKPGTPGADGLTGPDGSPGSIGSKGQKGEPGVPGSRGFPGRGIP GPPGPPGTAGLPGELGRVGPVGDPGRRGPPGPPGPPGPRGTIGFHDGDPLCPNACPPGRS GYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDK GEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDTGLP GVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPGQM GNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGLPGKLGSLGSPGLPGLPGPPGLP GMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGLPGPKGSAGNPGEPGLRGPEGSR GLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPGRAPTDQHIKQVCMRVIQEHFAEMAAS LKRPDSGATGLPGRPGPPGPPGPPGENGFPGQMGIRGLPGIKGPPGALGLRGPKGDLGEK GERGPPGRGPNGLPGAIGLPGDPGPASYGRNGRDGERGPPGVAGIPGVPGPPGPPGLPGF CEPASCTMQAGQRAFNKGPDP NT seq 2766 nt NT seq  +upstreamnt  +downstreamnt atgaagacctgctggaaaattccagttttcttctttgtgtgcagtttcctggaaccctgg gcatctgcagctgtcaagcgtcgccccagattccctgtcaattccaattctaatggtgga aatgaactctgtccaaagatcaggattggccaagatgacttaccagggtttgatctgatc tctcagttccaggtagataaagcagcatctagaagagctatccagagagtagtgggatca gctacattgcaggtggcttacaagttgggaaataatgtagacttcaggattccaactagg aatttatatcccagtggactgcctgaagaatactccttcttgacgacgtttcgaatgact ggaagcactctcaaaaagaactggaacatttggcagattcaggattcctctgggaaggag caagttggcataaagattaatggccaaacacaatctgttgtattttcatacaagggactg gatggaagtctccaaacagcagccttttcgaatttgtcctccttgtttgattcccagtgg cataagatcatgattggcgtggagaggagtagtgctactctttttgttgactgcaacagg attgaatctttacctataaagccaagaggcccaattgacattgatggctttgctgtgctg ggaaaacttgcagataatcctcaagtttctgttccatttgaacttcaatggatgctgatc cattgtgaccccctgcggcccaggagagaaacttgccatgagctgccagccagaataacg cccagccagaccaccgacgagagaggtcccccgggtgagcagggtcctcccgggcctccg ggcccccctggagttccaggcatcgatggcatcgacggtgaccgaggtcctaagggcccc ccgggccccccgggtcctgcaggtgaaccgggaaagccaggagctccaggcaagcctggc acacctggcgctgatggattaacaggacctgatggatcccctggctccattgggtcaaag ggacaaaaaggagaacctggtgtgcctggatcgcgtggatttccaggccgtggtattcct ggaccccctggtcctcctgggacagcaggactccctggagagcttggccgtgtaggacct gttggtgaccctgggagaagaggaccacctggcccccctggccccccaggacccagagga acaattggctttcatgatggagatccattgtgtcccaatgcctgtccaccaggtcgctca ggatatccaggcctaccaggcatgaggggtcataaaggggctaaaggagaaattggtgaa ccaggaagacaaggacacaagggtgaagaaggtgaccagggagaactcggagaagttgga gctcaaggacctccaggagcccagggtttgcgaggcatcaccggcatagttggggacaaa ggggaaaaaggtgctcggggcttagatggtgaacctgggcctcagggtcttcctggtgca cctggtgatcaaggacagcgaggacctccaggagaagcaggtcccaaaggagatagaggg gctgaaggtgctagaggaattcctggtctccctgggcccaaaggagacacgggtttgcca ggtgtggatggccgtgatgggatccctggaatgcctggaacaaagggtgaaccaggaaaa cctgggcctcctggtgatgcaggattgcaggggttaccaggtgtacctggaattcctggt gcaaagggtgttgctggtgaaaagggtagcacaggtgctccagggaagcctggtcagatg ggaaattcaggcaaaccgggccaacaggggcctccaggagaggtgggaccccgaggaccc caggggcttcctggcagtagaggagaattaggaccagtgggatccccaggcctaccaggt aaactgggttctctgggtagccctggcctccctggcttgcctgggccccctggacttcct ggaatgaaaggtgacaggggtgtagtcggtgaaccgggtccaaagggtgaacagggtgcc tctggtgaagaaggtgaagcaggagaaaggggggaacttggagatataggattacctggc ccaaagggatctgcaggtaatcctggggaacctggcttgagagggcctgagggaagtcgg gggcttcctggagtggaaggaccaagaggaccacctggaccccggggtgtgcagggagaa cagggtgccaccggcctgcctggtgtccagggccctccgggtagagcaccgacagatcag cacattaagcaggtttgcatgagagtcatacaagaacattttgctgagatggctgccagt cttaagcgtccagactcaggtgccactgggcttcctggaaggcctggccctcctggtccc cccggccctcctggagagaatggtttcccaggccagatgggaattcgtggccttccgggc attaaggggccccctggtgctcttggtttgaggggacctaaaggtgacttgggagaaaag ggggagcgtggccctccaggaagaggtcccaacggtttgcctggagctataggtctccca ggtgacccaggccctgccagctatggcagaaatggccgagacggtgagcgaggcccccca ggggtggcaggaattcctggagtgcctggacccccgggacctcctgggcttcccggtttc tgtgagccagcctcctgcaccatgcaggctggtcagcgagcatttaacaaagggcctgac ccttga

Homo sapiens (human): 1298 Help Entry 1298              CDS       T01001                                  Symbol COL9A2, DJ39G22.4, EDM2, MED, STL5 Name (RefSeq) collagen type IX alpha 2 chain   KO K08131   collagen type IX alpha Organism hsa  Homo sapiens (human) Pathway hsa04151   PI3K-Akt signaling pathway hsa04510   Focal adhesion hsa04512   ECM-receptor interaction hsa04820   Cytoskeleton in muscle cells hsa04974   Protein digestion and absorption hsa05165   Human papillomavirus infection Network nt06539  Cytoskeleton in muscle cells   Element N01814   Extracellular matrix - Basal lamina Disease H00476   Multiple epiphyseal dysplasia H02072   Stickler syndrome Brite KEGG Orthology (KO) [BR:hsa00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     1298 (COL9A2)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     1298 (COL9A2)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     1298 (COL9A2)   09142 Cell motility    04820 Cytoskeleton in muscle cells     1298 (COL9A2)  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     1298 (COL9A2)  09160 Human Diseases   09172 Infectious disease: viral    05165 Human papillomavirus infection     1298 (COL9A2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:hsa00535]     1298 (COL9A2) Proteoglycans [BR:hsa00535]  Extracellular matrix (ECM) proteoglycans   Others    1298 (COL9A2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen Motif Other DBs NCBI-GeneID:  1298 NCBI-ProteinID:  NP_001843 OMIM:  120260 HGNC:  2218 Ensembl:  ENSG00000049089 UniProt:  Q14055 Structure PDB LinkDB All DBs Position 1:complement(40300489..40317286) Genome browser AA seq 689 aa AA seqDB search MAAATASPRSLLVLLQVVVLALAQIRGPPGERGPPGPPGPPGVPGSDGIDGDNGPPGKAG PPGPKGEPGKAGPDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGPGFAGP PGPPGPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPP GMKGPPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGMA GPKGETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGITGPKGAT GPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGLAGVPGQPGTKGGPGDQGEPGPQGLP GFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPGIPGPQ GLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGPS GDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHIVDVALKMLQEQLAEV AVSAKREALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTGPKGKR GEKGDPGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGPVGL PGFCEPAACLGASAYASARLTEPGSIKGP NT seq 2070 nt NT seq  +upstreamnt  +downstreamnt atggccgccgctacggcctccccccgcagcctccttgttctcctccaggtggtagtgctc gctctggcgcagattagaggtccaccgggagagcggggccccccgggtcccccgggaccg ccgggagtgcctggatccgacggcatcgacggtgacaatgggccccctggaaaagctggc cctccgggacccaagggcgagcctggcaaagctgggccagatgggccagacgggaagccc gggattgatggtttaactggagccaagggggagcctggccccatggggatccctggagtc aagggccagcccgggcttcctggtcctcctggccttccgggccctggttttgctggacct cctgggcctcctggacctgttggcctccctggtgagattggaatccgaggccccaagggg gaccctggaccagatggaccatcggggcccccaggaccccctgggaaacctggtcgcccg ggaaccatccagggtctggaaggcagtgcggatttcctgtgtccaaccaactgtccaccc ggaatgaaaggtcccccagggctgcagggagtgaaggggcatgcgggcaaacgcgggatt ctgggtgatcctggccaccaggggaagccgggtcccaagggagatgtgggtgcctctgga gagcaaggcatccctggaccaccgggtccccagggcatcaggggctacccaggcatggca gggcccaagggagagacgggccctcatggatataaaggcatggtgggcgctatcggtgcc actgggccaccgggtgaggaaggtcctaggggaccgccaggccgagctggggagaagggt gacgagggcagcccaggtattcgtggaccccaggggatcacaggcccgaaaggagcaacg ggccccccaggcatcaacggcaaggatgggaccccaggcacgcctggcatgaagggcagt gcaggacaggcgggacagcccggaagtccaggccaccagggcctagcgggtgtgccaggc cagcctgggacaaaaggaggccctggagaccagggtgagccgggcccgcagggccttcct ggattctctggtccccctgggaaagagggagagccagggcctcgaggagaaattggtccc cagggcatcatgggacagaagggtgaccaaggcgagaggggtccagtggggcaaccaggc cctcagggaaggcagggccctaagggggagcagggcccccccggaattccagggccccaa ggcttgccaggcgtcaaaggagacaagggctccccagggaagaccgggccccgcggcaaa gtgggtgacccaggggtggccggcctccccggagagaaaggcgagaagggcgagtccggc gagccggggcccaagggacagcaaggagtacgtggagaacccggctaccctggccccagc ggggatgcgggcgccccaggggttcagggctaccctggtccccccggccctcgaggactg gccgggaaccgaggcgtgccaggacagcccgggagacagggcgtggagggccgggatgcc actgaccagcacatcgtggatgtggcgctgaagatgctgcaagagcaactggcagaggtc gccgtgagtgccaagcgggaagccctgggtgcggtgggcatgatgggtcctccaggacct cctgggccccctgggtacccaggcaagcagggcccccatgggcaccctggccctcggggc gttcctggcatcgtgggagccgtgggtcagatcggcaacacggggcccaagggaaaacgt ggagagaagggtgatccaggagaagtgggacgggggcaccccgggatgcctgggccccca gggatcccaggactccctggccggcctggccaggcaatcaacggcaaggatggagatcga gggtccccaggggctccaggagaggcaggtcgacctggcctgccaggccccgtggggctg ccgggcttctgtgaacctgccgcctgccttggagcttcggcctatgcctctgcccgcctt acagagcctggatccatcaaggggccttga

Homo sapiens (human): 1299 Help Entry 1299              CDS       T01001                                  Symbol COL9A3, DJ885L7.4.1, EDM3, IDD, MED, STL6 Name (RefSeq) collagen type IX alpha 3 chain   KO K08131   collagen type IX alpha Organism hsa  Homo sapiens (human) Pathway hsa04151   PI3K-Akt signaling pathway hsa04510   Focal adhesion hsa04512   ECM-receptor interaction hsa04820   Cytoskeleton in muscle cells hsa04974   Protein digestion and absorption hsa05165   Human papillomavirus infection Network nt06539  Cytoskeleton in muscle cells   Element N01814   Extracellular matrix - Basal lamina Disease H00476   Multiple epiphyseal dysplasia H02072   Stickler syndrome H02539   Intervertebral disc disease Brite KEGG Orthology (KO) [BR:hsa00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     1299 (COL9A3)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     1299 (COL9A3)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     1299 (COL9A3)   09142 Cell motility    04820 Cytoskeleton in muscle cells     1299 (COL9A3)  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     1299 (COL9A3)  09160 Human Diseases   09172 Infectious disease: viral    05165 Human papillomavirus infection     1299 (COL9A3)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:hsa00535]     1299 (COL9A3) Proteoglycans [BR:hsa00535]  Extracellular matrix (ECM) proteoglycans   Others    1299 (COL9A3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen Motif Other DBs NCBI-GeneID:  1299 NCBI-ProteinID:  NP_001844 OMIM:  120270 HGNC:  2219 Ensembl:  ENSG00000092758 UniProt:  Q14050 Structure PDB LinkDB All DBs Position 20:62816213..62841159 Genome browser AA seq 684 aa AA seqDB search MAGPRACAPLLLLLLLGELLAAAGAQRVGLPGPPGPPGPPGKPGQDGIDGEAGPPGLPGP PGPKGAPGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAPGERGSLGPPGPPGLGGKGLP GPPGEAGVSGPPGGIGLRGPPGPSGLPGLPGPPGPPGPPGHPGVLPEGATDLQCPSICPP GPPGPPGMPGFKGPTGYKGEQGEVGKDGEKGDPGPPGPAGLPGSVGLQGPRGLRGLPGPL GPPGDRGPIGFRGPPGIPGAPGKAGDRGERGPEGFRGPKGDLGRPGPKGTPGVAGPSGEP GMPGKDGQNGVPGLDGQKGEAGRNGAPGEKGPNGLPGLPGRAGSKGEKGERGRAGELGEA GPSGEPGVPGDAGMPGERGEAGHRGSAGALGPQGPPGAPGVRGFQGQKGSMGDPGLPGPQ GLRGDVGDRGPGGAAGPKGDQGIAGSDGLPGDKGELGPSGLVGPKGESGSRGELGPKGTQ GPNGTSGVQGVPGPPGPLGLQGVPGVPGITGKPGVPGKEASEQRIRELCGGMISEQIAQL AAHLRKPLAPGSIGRPGPAGPPGPPGPPGSIGHPGARGPPGYRGPTGELGDPGPRGNQGD RGDKGAAGAGLDGPEGDQGPQGPQGVPGTSKDGQDGAPGEPGPPGDPGLPGAIGAQGTPG ICDTSACQGAVLGGVGEKSGSRSS NT seq 2055 nt NT seq  +upstreamnt  +downstreamnt atggccgggccgcgcgcgtgcgccccgctcctgctcctgctcctgctcggggagcttctg gcggccgccggggcgcagagagtgggactccccggcccccccggccccccagggccgccc gggaagcccggccaggacggcattgacggagaagctggtcctccaggtctgcctgggccc ccgggaccaaagggggccccaggaaagccggggaaaccaggagaggctgggctgccggga ctgccgggtgtggatggtctgactggacgagatggaccccctggacccaagggtgcccct ggggaacggggaagtctgggacccccggggccgcccgggctggggggcaaaggcctccct ggaccccccggagaggcaggagtgagcggccccccaggtgggatcggcctccgcggcccc ccgggaccttctggactccccggcctccctggtcccccaggacctcccggaccccctgga cacccaggagtcctccctgaaggcgctactgaccttcagtgcccaagtatctgcccgcca ggtcccccagggccccctggaatgccagggttcaagggacccactggctacaaaggcgag cagggggaagtcggcaaggacggcgagaagggtgaccctggcccccctgggcccgccggc ctcccgggcagcgtggggctgcagggcccccggggattacgaggactgccagggccactc gggccccctggggaccggggtcccattgggttccgagggccgcctgggatcccaggagcg cctgggaaagcgggtgaccgaggcgagaggggcccagaagggttccgcggccccaagggt gacctcggcagacctggtcccaagggaacccccggagtggccgggccaagcggagagccg ggcatgccgggcaaggacggccagaatggcgtgccaggactcgatggccagaagggagag gctggtcgcaacggtgctccgggagagaagggccccaacgggctgccgggcctccctgga cgagcggggtccaaaggcgagaagggagaacggggcagagctggggagctgggtgaggcc ggcccctctggagagccaggcgtccctggagatgctggcatgcctggggagcgcggtgag gctggccaccggggctcagcgggggccctcggcccacaaggccctcccggagcccctggt gtccgaggcttccagggccagaagggcagcatgggagaccccggccttccaggcccccag ggcctccgaggtgacgtgggcgaccggggtccgggaggtgccgcaggccctaagggagac cagggtattgcaggttccgacggtcttcctggggataaaggagaactgggtcccagcggc ctggtcggacccaaaggagagtctggcagtcgaggggagctgggccccaaaggcacccag ggtcccaacggcaccagcggtgttcagggtgtccccgggccccccggtcctctgggcctg cagggcgtcccgggtgttcctggcatcacggggaagccgggagttccggggaaggaggcc agcgagcagcgcatcagggagctgtgtggggggatgatcagcgaacaaattgcacagtta gccgcgcacctaaggaagcctttggcacccgggtccattggtcggcccggtccagctggc ccccctgggcccccaggacccccaggctccattggtcaccctggcgctcgaggaccccct ggataccgcggtcccactggggagctgggagaccccgggcccagaggaaaccagggtgac agaggagacaaaggcgcggcaggagcagggctggacgggcctgaaggagaccaggggccc caaggaccccaaggcgtgcccggcaccagcaaggacggccaggacggtgctcccggcgag cctgggcctcccggagatcctgggcttccaggtgccattggggcccaggggacaccgggg atctgcgacacctcagcctgccaaggagccgtgttaggaggggtcggggagaaatcaggc tctcgaagctcataa

Homo sapiens (human): 1301 Help Entry 1301              CDS       T01001                                  Symbol COL11A1, CO11A1, COLL6, DFNA37, STL2 Name (RefSeq) collagen type XI alpha 1 chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism hsa  Homo sapiens (human) Pathway hsa04820   Cytoskeleton in muscle cells hsa04974   Protein digestion and absorption Network nt06539  Cytoskeleton in muscle cells   Element N01814   Extracellular matrix - Basal lamina Disease H00604   Deafness, autosomal dominant H00805   Vitreoretinal degeneration H02072   Stickler syndrome H02080   Fibrochondrogenesis H02081   Marshall syndrome H02539   Intervertebral disc disease Brite KEGG Orthology (KO) [BR:hsa00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     1301 (COL11A1)  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     1301 (COL11A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:hsa00536]     1301 (COL11A1) Glycosaminoglycan binding proteins [BR:hsa00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    1301 (COL11A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_3 Laminin_G_1 Motif Other DBs NCBI-GeneID:  1301 NCBI-ProteinID:  NP_001845 OMIM:  120280 HGNC:  2186 Ensembl:  ENSG00000060718 UniProt:  P12107 Q59HB5 LinkDB All DBs Position 1:complement(102876473..103108522) Genome browser AA seq 1806 aa AA seqDB search MEPWSSRWKTKRWLWDFTVTTLALTFLFQAREVRGAAPVDVLKALDFHNSPEGISKTTGF CTNRKNSKGSDTAYRVSKQAQLSAPTKQLFPGGTFPEDFSILFTVKPKKGIQSFLLSIYN EHGIQQIGVEVGRSPVFLFEDHTGKPAPEDYPLFRTVNIADGKWHRVAISVEKKTVTMIV DCKKKTTKPLDRSERAIVDTNGITVFGTRILDEEVFEGDIQQFLITGDPKAAYDYCEHYS PDCDSSAPKAAQAQEPQIDEYAPEDIIEYDYEYGEAEYKEAESVTEGPTVTEETIAQTEA NIVDDFQEYNYGTMESYQTEAPRHVSGTNEPNPVEEIFTEEYLTGEDYDSQRKNSEDTLY ENKEIDGRDSDLLVDGDLGEYDFYEYKEYEDKPTSPPNEEFGPGVPAETDITETSINGHG AYGEKGQKGEPAVVEPGMLVEGPPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPGLP GADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRP GPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDR GFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTP GAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKP GLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEK GEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVP GLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKP GPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKT GPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKD GPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQ GPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSK GDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQ GLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEA GNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPP GEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAK GEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLP GLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPP GPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGPPGEVIQPLPILSSKKTRRHTEG MQADADDNILDYSDGMEEIFGSLNSLKQDIEHMKFPMGTQTNPARTCKDLQLSHPDFPDG EYWIDPNQGCSGDSFKVYCNFTSGGETCIYPDKKSEGVRISSWPKEKPGSWFSEFKRGKL LSYLDVEGNSINMVQMTFLKLLTASARQNFTYHCHQSAAWYDVSSGSYDKALRFLGSNDE EMSYDNNPFIKTLYDGCASRKGYEKTVIEINTPKIDQVPIVDVMINDFGDQNQKFGFEVG PVCFLG NT seq 5421 nt NT seq  +upstreamnt  +downstreamnt atggagccgtggtcctctaggtggaaaacgaaacggtggctctgggatttcaccgtaaca accctcgcattgaccttcctcttccaagctagagaggtcagaggagctgctccagttgat gtactaaaagcactagattttcacaattctccagagggaatatcaaaaacaacgggattt tgcacaaacagaaagaattctaaaggctcagatactgcttacagagtttcaaagcaagca caactcagtgccccaacaaaacagttatttccaggtggaactttcccagaagacttttca atactatttacagtaaaaccaaaaaaaggaattcagtctttccttttatctatatataat gagcatggtattcagcaaattggtgttgaggttgggagatcacctgtttttctgtttgaa gaccacactggaaaacctgccccagaagactatcccctcttcagaactgttaacatcgct gacgggaagtggcatcgggtagcaatcagcgtggagaagaaaactgtgacaatgattgtt gattgtaagaagaaaaccacgaaaccacttgatagaagtgagagagcaattgttgatacc aatggaatcacggtttttggaacaaggattttggatgaagaagtttttgagggggacatt cagcagtttttgatcacaggtgatcccaaggcagcatatgactactgtgagcattatagt ccagactgtgactcttcagcacccaaggctgctcaagctcaggaacctcagatagatgag tatgcaccagaggatataatcgaatatgactatgagtatggggaagcagagtataaagag gctgaaagtgtaacagagggacccactgtaactgaggagacaatagcacagacggaggca aacatcgttgatgattttcaagaatacaactatggaacaatggaaagttaccagacagaa gctcctaggcatgtttctgggacaaatgagccaaatccagttgaagaaatatttactgaa gaatatctaacgggagaggattatgattcccagaggaaaaattctgaggatacactatat gaaaacaaagaaatagacggcagggattctgatcttctggtagatggagatttaggcgaa tatgatttttatgaatataaagaatatgaagataaaccaacaagcccccctaatgaagaa tttggtccaggtgtaccagcagaaactgatattacagaaacaagcataaatggccatggt gcatatggagagaaaggacagaaaggagaaccagcagtggttgagcctggtatgcttgtc gaaggaccaccaggaccagcaggacctgcaggtattatgggtcctccaggtctacaaggc cccactggaccccctggtgaccctggcgataggggccccccaggacgtcctggcttacca ggggctgatggtctacctggtcctcctggtactatgttgatgttaccgttccgttatggt ggtgatggttccaaaggaccaaccatctctgctcaggaagctcaggctcaagctattctt cagcaggctcggattgctctgagaggcccacctggcccaatgggtctaactggaagacca ggtcctgtgggggggcctggttcatctggggccaaaggtgagagtggtgatccaggtcct cagggccctcgaggcgtccagggtccccctggtccaacgggaaaacctggaaaaaggggt cgtccaggtgcagatggaggaagaggaatgccaggagaacctggggcaaagggagatcga gggtttgatggacttccgggtctgccaggtgacaaaggtcacaggggtgaacgaggtcct caaggtcctccaggtcctcctggtgatgatggaatgaggggagaagatggagaaattgga ccaagaggtcttccaggtgaagctggcccacgaggtttgctgggtccaaggggaactcca ggagctccagggcagcctggtatggcaggtgtagatggccccccaggaccaaaagggaac atgggtccccaaggggagcctgggcctccaggtcaacaagggaatccaggacctcagggt cttcctggtccacaaggtccaattggtcctcctggtgaaaaaggaccacaaggaaaacca ggacttgctggacttcctggtgctgatgggcctcctggtcatcctgggaaagaaggccag tctggagaaaagggggctctgggtccccctggtccacaaggtcctattggatacccgggc ccccggggagtaaagggagcagatggtgtcagaggtctcaagggatctaaaggtgaaaag ggtgaagatggttttccaggattcaaaggtgacatgggtctaaaaggtgacagaggagaa gttggtcaaattggcccaagaggggaagatggccctgaaggacccaaaggtcgagcaggc ccaactggagacccaggtccttcaggtcaagcaggagaaaagggaaaacttggagttcca ggattaccaggatatccaggaagacaaggtccaaagggttccactggattccctgggttt ccaggtgccaatggagagaaaggtgcacggggagtagctggcaaaccaggccctcggggt cagcgtggtccaacgggtcctcgaggttcaagaggtgcaagaggtcccactgggaaacct gggccaaagggcacttcaggtggcgatggccctcctggccctccaggtgaaagaggtcct caaggacctcagggtccagttggattccctggaccaaaaggccctcctggaccacctggg aaggatgggctgccaggacaccctgggcaacgtggggagactggatttcaaggcaagacc ggccctcctgggccagggggagtggttggaccacagggaccaaccggtgagactggtcca ataggggaacgtgggcatcctggccctcctggccctcctggtgagcaaggtcttcctggt gctgcaggaaaagaaggtgcaaagggtgatccaggtcctcaaggtatctcagggaaagat ggaccagcaggattacgtggtttcccaggggaaagaggtcttcctggagctcagggtgca cctggactgaaaggaggggaaggtccccagggcccaccaggtccagttggctcaccagga gaacgtgggtcagcaggtacagctggcccaattggtttaccagggcgcccgggacctcag ggtcctcctggtccagctggagagaaaggtgctcctggagaaaaaggtccccaagggcct gcagggagagatggagttcaaggtcctgttggtctcccagggccagctggtcctgccggc tcccctggggaagacggagacaagggtgaaattggtgagccgggacaaaaaggcagcaag ggtgacaagggagaaaatggccctcccggtcccccaggtcttcaaggaccagttggtgcc cctggaattgctggaggtgatggtgaaccaggtcctagaggacagcaggggatgtttggg caaaaaggtgatgagggtgccagaggcttccctggacctcctggtccaataggtcttcag ggtctgccaggcccacctggtgaaaaaggtgaaaatggggatgttggtcccatggggcca cctggtcctccaggcccaagaggccctcaaggtcccaatggagctgatggaccacaagga cccccagggtctgttggttcagttggtggtgttggagaaaagggtgaacctggagaagca gggaacccagggcctcctggggaagcaggtgtaggcggtcccaaaggagaaagaggagag aaaggggaagctggtccacctggagctgctggacctccaggtgccaaggggccaccaggt gatgatggccctaagggtaacccgggtcctgttggttttcctggagatcctggtcctcct ggggaacctggccctgcaggtcaagatggtgttggtggtgacaagggtgaagatggagat cctggtcaaccgggtcctcctggcccatctggtgaggctggcccaccaggtcctcctgga aaacgaggtcctcctggagctgcaggtgcagagggaagacaaggtgaaaaaggtgctaag ggggaagcaggtgcagaaggtcctcctggaaaaaccggcccagtcggtcctcagggacct gcaggaaagcctggtccagaaggtcttcggggcatccctggtcctgtgggagaacaaggt ctccctggagctgcaggccaagatggaccacctggtcctatgggacctcctggcttacct ggtctcaaaggtgaccctggctccaagggtgaaaagggacatcctggtttaattggcctg attggtcctccaggagaacaaggggaaaaaggtgaccgagggctccctggaactcaagga tctccaggagcaaaaggggatgggggaattcctggtcctgctggtcccttaggtccacct ggtcctccaggtttaccaggtcctcaaggcccaaagggtaacaaaggctctactggaccc gctggccagaaaggtgacagtggtcttccagggcctcctgggtctccaggtccacctggt gaagtcattcagcctttaccaatcttgtcctccaaaaaaacgagaagacatactgaaggc atgcaagcagatgcagatgataatattcttgattactcggatggaatggaagaaatattt ggttccctcaattccctgaaacaagacattgagcatatgaaatttccaatgggtactcag accaatccagcccgaacttgtaaagacctgcaactcagccatcctgacttcccagatggt gaatattggattgatcctaaccaaggttgctcaggagattccttcaaagtttactgtaat ttcacatctggtggtgagacttgcatttatccagacaaaaaatctgagggagtaagaatt tcatcatggccaaaggagaaaccaggaagttggtttagtgaatttaagaggggaaaactg ctttcatacttagatgttgaaggaaattccatcaatatggtgcaaatgacattcctgaaa cttctgactgcctctgctcggcaaaatttcacctaccactgtcatcagtcagcagcctgg tatgatgtgtcatcaggaagttatgacaaagcacttcgcttcctgggatcaaatgatgag gagatgtcctatgacaataatccttttatcaaaacactgtatgatggttgtgcgtccaga aaaggctatgaaaagactgtcattgaaatcaatacaccaaaaattgatcaagtacctatt gttgatgtcatgatcaatgactttggtgatcagaatcagaagttcggatttgaagttggt cctgtttgttttcttggctaa

DBGET integrated database retrieval system