Homo sapiens (human): 1674
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Entry
1674 CDS
T01001
Symbol
DES, CDCD3, CSM1, CSM2, LGMD1D, LGMD1E, LGMD2R
Name
(RefSeq) desmin
KO
K07610
desmin
Organism
hsa
Homo sapiens (human)
Pathway
hsa04820
Cytoskeleton in muscle cells
hsa05410
Hypertrophic cardiomyopathy
hsa05412
Arrhythmogenic right ventricular cardiomyopathy
hsa05414
Dilated cardiomyopathy
Network
nt06539
Cytoskeleton in muscle cells
Element
N01758
Desmosome - Vimentin filaments
N01816
Costamere
N01822
Linker of nucleoskeleton and cytoskeleton (LINC) complex
Disease
H00294
Dilated cardiomyopathy
H00595
Myofibrillar myopathies
H00656
Scapuloperoneal myopathy
H01219
Restrictive cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
1674 (DES)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
1674 (DES)
05412 Arrhythmogenic right ventricular cardiomyopathy
1674 (DES)
05414 Dilated cardiomyopathy
1674 (DES)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsa04812
]
1674 (DES)
Cytoskeleton proteins [BR:
hsa04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
1674 (DES)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
GAS
APG6_N
DUF1664
MHC_I_3
Trimer_CC
Golgin_A5
Motif
Other DBs
NCBI-GeneID:
1674
NCBI-ProteinID:
NP_001918
OMIM:
125660
HGNC:
2770
Ensembl:
ENSG00000175084
UniProt:
P17661
Q53SB5
LinkDB
All DBs
Position
2:219418377..219426734
Genome browser
AA seq
470 aa
AA seq
DB search
MSQAYSSSQRVSSYRRTFGGAPGFPLGSPLSSPVFPRAGFGSKGSSSSVTSRVYQVSRTS
GGAGGLGSLRASRLGTTRTPSSYGAGELLDFSLADAVNQEFLTTRTNEKVELQELNDRFA
NYIEKVRFLEQQNAALAAEVNRLKGREPTRVAELYEEELRELRRQVEVLTNQRARVDVER
DNLLDDLQRLKAKLQEEIQLKEEAENNLAAFRADVDAATLARIDLERRIESLNEEIAFLK
KVHEEEIRELQAQLQEQQVQVEMDMSKPDLTAALRDIRAQYETIAAKNISEAEEWYKSKV
SDLTQAANKNNDALRQAKQEMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEA
SGYQDNIARLEEEIRHLKDEMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLPI
QTYSALNFRETSPEQRGSEVHTKKTVMIKTIETRDGEVVSEATQQQHEVL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggcctactcgtccagccagcgcgtgtcctcctaccgccgcaccttcggcggg
gccccgggcttcccactcggctccccgctgagttcgcccgtgttcccgcgggcgggtttc
ggctctaagggctcctccagctcggtgacgtcccgcgtgtaccaggtgtcgcgcacgtcg
ggcggggccgggggcctggggtcgctgcgggccagccggctggggaccacccgcacgccc
tcctcctacggcgcaggcgagctgctggacttctcactggccgacgcggtgaaccaggag
tttctgaccacgcgcaccaacgagaaggtggagctgcaggagctcaatgaccgcttcgcc
aactacatcgagaaggtgcgcttcctggagcagcagaacgcggcgctcgccgccgaagtg
aaccggctcaagggccgcgagccgacgcgagtggccgagctctacgaggaggagctgcgg
gagctgcggcgccaggtggaggtgctcactaaccagcgcgcgcgcgtcgacgtcgagcgc
gacaacctgctcgacgacctgcagcggctcaaggccaagctgcaggaggagattcagttg
aaggaagaagcagagaacaatttggctgccttccgagcggacgtggatgcagctactcta
gctcgcattgacctggagcgcagaattgaatctctcaacgaggagatcgcgttccttaag
aaagtgcatgaagaggagatccgtgagttgcaggctcagcttcaggaacagcaggtccag
gtggagatggacatgtctaagccagacctcactgccgccctcagggacatccgggctcag
tatgagaccatcgcggctaagaacatttctgaagctgaggagtggtacaagtcgaaggtg
tcagacctgacccaggcagccaacaagaacaacgacgccctgcgccaggccaagcaggag
atgatggaataccgacaccagatccagtcctacacctgcgagattgacgccctgaagggc
actaacgattccctgatgaggcagatgcgggaattggaggaccgatttgccagtgaggcc
agtggctaccaggacaacattgcgcgcctggaggaggaaatccggcacctcaaggatgag
atggcccgccatctgcgcgagtaccaggacctgctcaacgtgaagatggccctggatgtg
gagattgccacctaccggaagctgctggagggagaggagagccggatcaatctccccatc
cagacctactctgccctcaacttccgagaaaccagccctgagcaaaggggttctgaggtc
cataccaagaagacggtgatgatcaagaccatcgagacacgggatggggaggtcgtcagt
gaggccacacagcagcagcatgaagtgctctaa
Homo sapiens (human): 7431
Help
Entry
7431 CDS
T01001
Symbol
VIM
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
hsa
Homo sapiens (human)
Pathway
hsa04820
Cytoskeleton in muscle cells
hsa05169
Epstein-Barr virus infection
hsa05206
MicroRNAs in cancer
Network
nt06539
Cytoskeleton in muscle cells
Element
N01758
Desmosome - Vimentin filaments
Disease
H01202
Cataract
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
7431 (VIM)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
7431 (VIM)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
7431 (VIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsa03019
]
7431 (VIM)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsa04812
]
7431 (VIM)
04147 Exosome [BR:
hsa04147
]
7431 (VIM)
Messenger RNA biogenesis [BR:
hsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
7431 (VIM)
Cytoskeleton proteins [BR:
hsa04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
7431 (VIM)
Exosome [BR:
hsa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
7431 (VIM)
Exosomal proteins of other cancer cells
7431 (VIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
TolA_bind_tri
GeBP-like_DBD
TPR_MLP1_2
RBD-FIP
Laminin_II
DUF4515
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
7431
NCBI-ProteinID:
NP_003371
OMIM:
193060
HGNC:
12692
Ensembl:
ENSG00000026025
UniProt:
P08670
V9HWE1
Structure
PDB
LinkDB
All DBs
Position
10:17228241..17237593
Genome browser
AA seq
466 aa
AA seq
DB search
MSTRSVSSSSYRRMFGGPGTASRPSSSRSYVTTSTRTYSLGSALRPSTSRSLYASSPGGV
YATRSSAVRLRSSVPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDK
VRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLAE
DIMRLREKLQEEMLQREEAENTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEE
EIQELQAQIQEQHVQIDVDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSE
AANRNNDALRQAKQESTEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQD
TIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPNFSS
LNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaggtccgtgtcctcgtcctcctaccgcaggatgttcggcggcccgggcacc
gcgagccggccgagctccagccggagctacgtgactacgtccacccgcacctacagcctg
ggcagcgcgctgcgccccagcaccagccgcagcctctacgcctcgtccccgggcggcgtg
tatgccacgcgctcctctgccgtgcgcctgcggagcagcgtgcccggggtgcggctcctg
caggactcggtggacttctcgctggccgacgccatcaacaccgagttcaagaacacccgc
accaacgagaaggtggagctgcaggagctgaatgaccgcttcgccaactacatcgacaag
gtgcgcttcctggagcagcagaataagatcctgctggccgagctcgagcagctcaagggc
caaggcaagtcgcgcctgggggacctctacgaggaggagatgcgggagctgcgccggcag
gtggaccagctaaccaacgacaaagcccgcgtcgaggtggagcgcgacaacctggccgag
gacatcatgcgcctccgggagaaattgcaggaggagatgcttcagagagaggaagccgaa
aacaccctgcaatctttcagacaggatgttgacaatgcgtctctggcacgtcttgacctt
gaacgcaaagtggaatctttgcaagaagagattgcctttttgaagaaactccacgaagag
gaaatccaggagctgcaggctcagattcaggaacagcatgtccaaatcgatgtggatgtt
tccaagcctgacctcacggctgccctgcgtgacgtacgtcagcaatatgaaagtgtggct
gccaagaacctgcaggaggcagaagaatggtacaaatccaagtttgctgacctctctgag
gctgccaaccggaacaatgacgccctgcgccaggcaaagcaggagtccactgagtaccgg
agacaggtgcagtccctcacctgtgaagtggatgcccttaaaggaaccaatgagtccctg
gaacgccagatgcgtgaaatggaagagaactttgccgttgaagctgctaactaccaagac
actattggccgcctgcaggatgagattcagaatatgaaggaggaaatggctcgtcacctt
cgtgaataccaagacctgctcaatgttaagatggcccttgacattgagattgccacctac
aggaagctgctggaaggcgaggagagcaggatttctctgcctcttccaaacttttcctcc
ctgaacctgagggaaactaatctggattcactccctctggttgatacccactcaaaaagg
acacttctgattaagacggttgaaactagagatggacaggttatcaacgaaacttctcag
catcacgatgaccttgaataa
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integrated database retrieval system
